The 2-dimensional to 3-dimensional growth transition in Physcomitrella patens

Lead Research Organisation: University of Oxford
Department Name: Interdisciplinary Bioscience DTP

Abstract

An important event in evolutionary history was the colonisation of the land by plants. In the charophyte green algae, the sister group of land plants, growth occurs from apical initial cells with only one or two cutting faces, producing simple forms. The movement from water to land was accompanied by the acquisition of apical initial cells that could cleave in three planes. 3-dimensional (3D) growth is thus a defining feature of all land plants, which underpins structurally complex biomes that form the foundation of important terrestrial ecosystems. The onset of 3D growth in flowering plants occurs during embryogenesis. For this reason, flowering plants such a Arabidopsis thaliana cannot easily be exploited to investigate the genetic basis of 3D growth. However, it is possible to genetically dissect 3D growth in the model moss Physcomitrella patens, an extant representative of one of the earliest diverging land plant lineages. In P. patens, a 2-dimensional (2D) growth phase precedes 3D growth initiation and this 2D phase can be maintained indefinitely. Consequently, forward genetics can be used to create viable 3D-defective mutants in P. patens and a somatic hybidisation based approach can then be used to identify causative mutations, and help elucidate the underlying regulatory networks underpinning 3D growth in plants. It was previously shown that the NO GAMETOPHORES 1 (PpNOG1) gene is essential for 3D growth in P. patens. The aim of this project is to perform further functional characterisation of PpNOG1 in P. patens, and through a comparative approach, in A. thaliana. The first strand of the project will determine the PpNOG1 interaction partners. Next, the function of NOG1 in A. thaliana will be explored. Additionally, the project will examine the effect of PpNOG1 on cell division planes and investigate phytohormone signalling during the transition to 3D growth. Finally, transcriptomics will be used to glean a full picture of how the 3D-defective mutants Ppnog1 & 2 differ transcriptionally from wild type.

Publications

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Studentship Projects

Project Reference Relationship Related To Start End Student Name
BB/M011224/1 01/10/2015 31/03/2024
2270227 Studentship BB/M011224/1 01/10/2019 31/12/2023
 
Description I have generated transgenic lines in Physcomitrium patens which I am now investigating in the context of my research objectives. This is a significant achievement as it represents a foundation for many aspects of my investigations.
I have analysed data from two transcriptomics experiments which have yielded lots of exciting information. I will use this to plan future experiments and the data also now exists as a resource for other researchers.
I am working with a mutant line in which a suppressor mutation has been generated. I am now in the process of mapping the supressor which will add to our knowledge of the gene regulatory network that I am investigating.
I am conducting protein interaction studies to learn more about the precise function of the gene that my work is focuse on (NO GAMETOPHORES 1)
Exploitation Route The RNA-seq data that I have generated and have been working with will be made publicly available for other researchers to use.
Any transgenic lines that are published will also be available upon request.
I am contributing to knowledge of a regulatory network that other researchers are working on, so my discoveries could help them in their investigations.
Sectors Agriculture, Food and Drink,Other