Investigating Novel Two-Dimensional Halogen-Bonded Networks
Lead Research Organisation:
University of Cambridge
Department Name: Chemistry
Abstract
The formation of two-dimensional supramolecular networks on inert surfaces has been studied by several groups over the last two decades, with attention focussed upon achieving control over network porosity and the possibility of functionalisation. Common to the majority of work undertaken to date is the role of hydrogen bonds in stabilising these networks and controlling their porosity. Very recently, however, collaborative work from the (Stephen) Jenkins and (Stuart) Clarke groups at Cambridge has highlighted the exciting prospect of creating such networks through the use of halogen bonds.
Halogen bonds are somewhat analogous to hydrogen bonds, but with some important differences. In hydrogen bonding, a hydrogen atom bound to a strongly electropositive atom become somewhat positively charged,
and hence capable of strong (mainly, but not wholly, electrostatic) attractive interaction with nearby electronegative species. In halogen bonds, the role of hydrogen is played by a readily polarisable halogen
atom - although such an atom is itself electronegative, polarisation can lead to a positively charged region of space known as the sigma hole, which can again attract nearby electronegative species.
In this PhD project, the student will investigate the nature of two-dimensional networks formed by halogen-bonding species on metal and graphitic surfaces. The work will involve a variety of techniques, including synchrotron-based methods, infrared spectroscopy and scanning tunnelling microscopy. The initial emphasis will be upon finding species (or combinations of species) that give rise to porous networks; later, attention will turn to functionalising the pores, so that they can act to direct surface chemical reactions occurring within them.
Halogen bonds are somewhat analogous to hydrogen bonds, but with some important differences. In hydrogen bonding, a hydrogen atom bound to a strongly electropositive atom become somewhat positively charged,
and hence capable of strong (mainly, but not wholly, electrostatic) attractive interaction with nearby electronegative species. In halogen bonds, the role of hydrogen is played by a readily polarisable halogen
atom - although such an atom is itself electronegative, polarisation can lead to a positively charged region of space known as the sigma hole, which can again attract nearby electronegative species.
In this PhD project, the student will investigate the nature of two-dimensional networks formed by halogen-bonding species on metal and graphitic surfaces. The work will involve a variety of techniques, including synchrotron-based methods, infrared spectroscopy and scanning tunnelling microscopy. The initial emphasis will be upon finding species (or combinations of species) that give rise to porous networks; later, attention will turn to functionalising the pores, so that they can act to direct surface chemical reactions occurring within them.
People |
ORCID iD |
Stephen Jenkins (Primary Supervisor) | |
Jonathan Davidson (Student) |
Studentship Projects
Project Reference | Relationship | Related To | Start | End | Student Name |
---|---|---|---|---|---|
EP/N509620/1 | 01/10/2016 | 30/09/2022 | |||
1800468 | Studentship | EP/N509620/1 | 01/10/2016 | 30/09/2020 | Jonathan Davidson |
Description | Halogen bonded porous networks are difficult to form using techniques previously developed for non-porous networks. The qualities that make a molecule a good halogen bond donor also make it interact strongly with metals. Although literature has reported Ulmann coupling of X-bond donors on gold occurring at elevated temperatures, it appears to do so at room temperature for the highly fluorinated molecules used in this work, for this reason monolayers formed on graphite are to be the main area of future work. Dosing of new, hydrophilic X-bond accepting molecules within glass vessels is often unsatisfactory. Alternative dosing methods have proven successful in reproducing previously reported work, and will now be extended to new potentially porous systems. Fluoroalkane chains are highly rigid and scatter significantly more strongly than the fluorinated aromatic molecules used previously. Unexpectedly, they are also better halogen bond donors than the aromatic systems, with theoretical work ongoing to explain this. |
Exploitation Route | Porous networks formed by halogen bonds could provide excellent sites for functionalisation. The tunability of the nature of the pores would allow much work to be performed studying host-guest binding within pores, or for using the pores as templates for further surface functionalisation. The sites could also be of use for catalysis of a wide range of chemical reactions, and have effects on a range of sectors. |
Sectors | Chemicals,Energy |
Description | Use of diffraction techniques to validate results obtained via scanning tunnelling microscopy on hydrogen bonded monolayer systems of trimesic acid (TMA) |
Organisation | Technical University of Munich |
Country | Germany |
Sector | Academic/University |
PI Contribution | Use of the diffraction techniques developed for study of halogen bonding systems as a complementary non-invasive probe of a system that has been heavily studied by STM. Preliminary results indicate that properties of the system (observed phases, exact lattice parameters) can vary when a non-invasive diffraction technique is used, as opposed to the invasive STM. |
Collaborator Contribution | Provision of expertise regarding the fomation of TMA monolayers under vapour deposition and solution deposition methods. Provision of samples of deuterated TMA for investigation. |
Impact | Beamline experiment on I11 at Diamond(performed), and neutron scattering experiment (scheduled) on D20 at ILL. |
Start Year | 2018 |
Description | St Catharine's College Graduate seminar |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Postgraduate students |
Results and Impact | Gave two talks on my work as part of a series of seminars run in college for postgraduate students to present to fellow students. The audience was made up of ~15 students each time, coming from a variety of subjects incl non-scientists. I was told by one MBA student this helped to "demystify" what it is that science PhD students actually do. |
Year(s) Of Engagement Activity | 2017,2018 |