Collaborative Tool Development to promote the Adoption of Visual Representation Standards in Systems Biology

Lead Research Organisation: University of Edinburgh
Department Name: Sch of Informatics

Abstract

Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.

Publications

10 25 50
publication icon
Le Novere N (2011) Systems Biology Graphical Notation: Entity Relationship language Level 1 (Version 1.2) in Nature Precedings

publication icon
Le Novère N (2009) The Systems Biology Graphical Notation. in Nature biotechnology

publication icon
Le Novère N (2011) Meeting report from the first meetings of the Computational Modeling in Biology Network (COMBINE). in Standards in genomic sciences

publication icon
Mi H (2009) Systems Biology Graphical Notation: Activity Flow language Level 1 in Nature Precedings

publication icon
Moodie S (2011) Systems Biology Graphical Notation: Process Description language Level 1 in Nature Precedings

publication icon
Van Iersel MP (2012) Software support for SBGN maps: SBGN-ML and LibSBGN. in Bioinformatics (Oxford, England)

 
Description Usedi n Biotechnology and Pharma Industry
First Year Of Impact 2009
Sector Education,Pharmaceuticals and Medical Biotechnology,Security and Diplomacy
Impact Types Cultural,Societal,Economic
 
Description COMBINE workshops. 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Study participants or study members
Results and Impact An important activity of COMBINE is to organise common meetings, where the developers of the different standards can meet and work together. In 2010, we inaugurated a new, broader series of meetings to replace, the existing individual forums and hackathons. The new meetings are a recognition of the fact that there are multiple allied standardization efforts that should work together towards smooth interoperability. Moreover, we believe a joint meeting makes good economic sense: compared to multiple separate workshops, they reduce the overall number of meetings, travel, and money spent over the year.
Those events, as others related to our field of research are gathered in a calendar.
Annual COMBINE forums
The annual COMBINE forums are workshop-style events with oral presentations plus discussion, poster and breakout sessions. They are aimed at further developing the standards. The meetings cover the COMBINE standards and associated or related standardization efforts. The participants are everyone wishing to participate to the development of the standards.
Year(s) Of Engagement Activity 2010,2011,2012,2013,2014,2015,2016,2017,2018
URL http://co.mbine.org