The function of the imprinted microRNA-483 in growth, metabolism and cancer

Lead Research Organisation: University of Cambridge
Department Name: Obstetrics and Gynaecology

Abstract

MicroRNAs are small molecules that control the amount of proteins that the body makes, as well as the timing that these proteins are made. Because of this action they are very important for development and the health of organisms. The precise function of many microRNAs, estimated to be in their hundreds in humans, is unknown. Many of these small molecules are made from inside genes and they are dependent on those genes machinery to be produced. MiR-483 is a microRNA that is produced by the machinery that makes an important growth factor in the body called Igf2. We know what Igf2 does, it promotes growth and is also involved in how much fat and sugar we can store, but nothing is known about its partner microRNA. We have made an interesting observation: when we make a mouse that does not have the microRNA, but still makes the growth factor Igf2 normally, this results in postnatal overgrowth (the genetically engineered mice are about 10% heavier than their brothers and sisters that were not engineered). This exciting results suggests that the main function of this microRNA is to put the brakes on growth, a function that is precisely the opposite of its host gene! We now want to find out more about this microRNA - what else does it do in addition to regulate postnatal growth? Is it involved in the many ways we control fat and sugar storage and how we use those stores? Does it have a role in diseases of growth such as cancer? What genes and proteins does this microRNA help to control? Can we find precisely how it works? This project is important because it can give us new clues on how microRNAs work, in particular in growth control (as far as we know this is the first example of an microRNA involved in control of body size). If it turns out that its normal function is indeed to put down the brakes on growth it will be very important to consider using it as an anti-cancer therapy. Other diseases of growth control, such as those that lead to smaller babies and big babies, with and without postnatal growth compensation may also benefit from our research.

Technical Summary

Growth is essential for life. Regulation of growth of an organism in relation to its environment is pivotal for evolutionary success and fitness. Related and similarly important is the regulation of the size of the individual organs in the body in relation to each other and to the size of the whole organism. The pathway in which the Growth Hormone/Insulin-like growth factor 1 axis participates provides the main conduit of growth control as evidenced by mouse genetic experiments. It is estimated that only 17% of the total body size of an adult mouse can be attained without the participation of GH and IGF1. Finding growth control mechanisms that are independent of the circuitry involving GH/IGF1 is an important basic research topic, with important clinical applications. MicroRNAs are a large family of post-transcriptional regulators of gene expression that are ~21 nucleotides in length. A single miRNA may act as a master control of gene expression through regulation of multiple targets. Up to a third of microRNA genes are intronic and transcribed along theirs host genes. The major fetal growth factor IGF2 locus harbors a microRNA (miR-483). We recently tested the potential activity of miR-483 as a growth control microRNA by generating a knock-out mouse. Our results provide evidence for an important role of miR-483 in early postnatal body size and organ growth control. To our knowledge miR-483 constitutes the first example of a growth control miRNA. This proposal aims to seek the molecular pathways underlying growth repression by miR-483. We will explore the idea that miR-483 may interfere with previously undescribed genetic pathways that control growth. This work will yield important novel insights into the genetics of growth and cell proliferation diseases such as cancer, in addition to contributing to our understanding of the evolution of genomic imprintin

Planned Impact

Growth is essential for life. Being the right size in different circumstances and environments can crucially affect survival and reproductive success. Growth is thus an area of interest to a diverse group of beneficiaries including the general public, scientists, health care professionals and policy makers. For example, Intra-uterine growth restriction (IUGR) is a complication that affects 3% of all pregnancies and results from the fetus failing to achieve its genetically determined growth potential. Low birth weight is a major cause of neonatal morbidity and mortality and is associated with later life risk of type 2 diabetes and cardiovascular disease. Identifying the key mechanisms by which growth trajectories are normally maintained and regulated, and of the pathological processes leading to abnormal growth, would be of considerable benefit to improving health. This project will address the contributions of an imprinted microRNA for growth, cellular proliferation and cancer using mouse models, with expected significant new insights for human growth conditions and cancer with diagnostic and potentially therapeutic value. Pregnant women and cancer patients are therefore likely important beneficiaries. The findings of the current study will be disseminated through multiple channels and to multiple target audiences to ensure maximum cost benefit.

The general public will be informed via press and broadcast media following joint press releases by the University of Cambridge press office in consultation with the MRC. The applicant has considerable experience in public dissemination of his group's findings. Dr Constancia has frequent contact with the media including TV, radio and magazines and has given public lectures. Dr Constancia's group are involved in activities run by the University of Cambridge during National Science week and every year he hosts a couple of undergraduate students, from the UK and Europe, in his laboratory.

Peer reviewed publications in the scientific literature as well as international conference presentations will be the main route by which findings are disseminated to the scientific community. Dr Constancia is a member of the Centre for Trophoblast Research that will provide a further route for dissemination to individuals with an interest in imprinting, epigenetics, growth disorders and cancer. Dr. Constancia is regularly invited to present lectures at international conferences, including those aimed at research scientist as well as clinicians and health care professionals. He also give lectures to both undergraduate and graduate students.
 
Description KAUST
Amount £96,540 (GBP)
Funding ID G101461 
Organisation King Abdullah University of Science and Technology (KAUST) 
Sector Academic/University
Country Saudi Arabia
Start 10/2020 
End 11/2023
 
Description MRC UNIT (Programme grant)
Amount £1,200,000 (GBP)
Organisation Medical Research Council (MRC) 
Sector Public
Country United Kingdom
Start 04/2013 
End 04/2018
 
Title Mir-483 overexpressing mouse model 
Description Inducible TET-OFF mouse model of expression of miR-483, that can be spatially and temporally regulated 
Type Of Material Model of mechanisms or symptoms - mammalian in vivo 
Provided To Others? No  
Impact Manuscript in preparation 
 
Title mir-483 knock-out 
Description Mice that lack miR-483 in all cell types, achieved by homologous recombination in ES cells and germ line transmission of the mutation 
Type Of Material Model of mechanisms or symptoms - mammalian in vivo 
Provided To Others? No  
Impact Manuscript in preparation 
 
Title Proteomics in early embryos of over expressing miR-483 mice 
Description Tandem mass tag (TMT) proteomics studies in embryos that over express miR-483 and wild-type controls 
Type Of Material Database/Collection of data 
Provided To Others? No  
Impact manuscript in preparation 
 
Title Transcriptome in early embryos over expressing miR-483 
Description RNA Seq performed in early embryos of mice over expressing miR-483 from the endogenous locus (i.e. 5 copies of miR-483) and wild-type controls 
Type Of Material Database/Collection of data 
Provided To Others? No  
Impact Manuscript in preparation 
 
Title Transcriptome of miR-483 knock-out fetal liver 
Description RNA Seq of mouse fetal liver derived from miR-483 knock-out mice and wild-type controls. 
Type Of Material Database/Collection of data 
Provided To Others? No  
Impact Manuscript in preparation 
 
Description Epigenome studies Human Obesity 
Organisation University of Porto
Department Abel Salazar Institute of Biomedical Sciences
Country Portugal 
Sector Public 
PI Contribution Expertise in Epigenetics; host lab of visiting scientists
Collaborator Contribution Collection of adipose tissue from obese people and lean controls
Impact n/a
Start Year 2018
 
Description 24th European Congress on Obesity (ECO 2017) Miguel Constancia 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact https://www.ncbi.nlm.nih.gov/pubmed/28528328
Year(s) Of Engagement Activity 2017
URL https://easo.org/congress-proceedings/eco2017-porto-portugal/
 
Description Advances at the interface between Metabolism and Epigenetics, Cambridge UK, 2019 (Miguel Constancia -co-organiser) 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact The intended purpose was to gather a number of world-leaders to discuss the latest developments in metabolism and epigenetics, from cellular metabolism, to normal physiology and disease
Year(s) Of Engagement Activity 2019
URL http://www.metabolism.cam.ac.uk/advances-at-the-interface-between-metabolism-and-epigenetics/
 
Description EMBO Practical Course 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Type Of Presentation Poster Presentation
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Wendy Cooper (presenter), Yoichi Sekita, Ilona Zvetkova and Miguel Constancia

Investigating the roles of Igf2 and its intronic micro RNA, miR-483, on the mouse fetal liver transcriptome

Poster at EMBO Practical Course on Analysis of High-Throughput Sequencing Data (21-26 Oct 2013)

Wendy Cooper obtained training on analysis of high-throughput sequencing data
Year(s) Of Engagement Activity 2013
URL http://www.ebi.ac.uk/training/course/embo-practical-course-analysis-high-throughput-sequencing-data-...
 
Description EMBO/EMBL Symposia - Ionel Sandovici 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Poster presentation on 'IGF2 is a key feto-placental communication signal that maintains normal growth and development'
Year(s) Of Engagement Activity 2022
URL https://www.embl.org/about/info/course-and-conference-office/events/ees22-02/
 
Description ESPE Advanced Seminar in Developmental Endocrinology, Rome, May 2014 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Talk sparked questions and discussion afterwards

After my talk, and after listening to talk by others, I explored new scientific collaborations with colleagues I had never met before
Year(s) Of Engagement Activity 2014
URL https://www.eurospe.org/education/education_DevEndoSeminar.html
 
Description Gordon Research Conference - Miguel Constancia 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Invited speaker on the topic of Inter-organ communication and IGFs
Year(s) Of Engagement Activity 2023
URL https://www.grc.org/igf-and-insulin-system-in-physiology-and-disease-conference/2023/
 
Description II International Symposium on Biological Sciences, Ouro Preto, Brasil, 2017 (Miguel Constancia) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Undergraduate students
Results and Impact Simposium
Year(s) Of Engagement Activity 2017
URL https://ufop.br/eventos/ii-simposio-internacional-de-ciencias-biologicas
 
Description Invited online seminar by Miguel Constancia @ the College of Health and Life Sciences Seminar Series, Hamad Bin Khalifa University, Doha, Qatar 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Research talk on Epigenetic Programming of growth and metabolism
Year(s) Of Engagement Activity 2021
 
Description Invited online seminar by Miguel Constancia @ the National Taiwan University 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Research seminar on Epigenetic Programming of Growth and Metabolism
Year(s) Of Engagement Activity 2021
 
Description Invited online speaker - Ionel Sandovici - @ 2nd International Conference on Cell and Experimental Biology (CEB-2021) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Lecture titled: Novel insights into the regulation of pancreas development and function by the imprinted Igf2 gene
Year(s) Of Engagement Activity 2021
 
Description Invited speaker Satellite Meeting of the 66th Annual Scientific Meeting (Society for Reproductive Investigation) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Invited speaker on the session 'The Placenta: The Pregnancy Communication Hub' (66th SRI Annual Scientific Meeting - Paris)
Year(s) Of Engagement Activity 2019
URL https://www.sri-online.org/meetings-calendar/2019/program/satellite-meetings/placenta-satellite-meet...
 
Description Keystone 2013 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Type Of Presentation Keynote/Invited Speaker
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact talk on "Epigenetic Programming of Metabolic Health across the life course"
Keystone Symposia in Nutrition, Epigenetics and Human Disease, Santa Fe', Mexico, February 22, 2013

A PhD student from Brasil (Universidade de Ouro Preto) in attendance at this conference is now receiving training in epigenetics and metabolism in my lab for 9 months (October 2013-June2014)
Year(s) Of Engagement Activity 2013
 
Description Latin America conference 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Type Of Presentation Keynote/Invited Speaker
Geographic Reach International
Primary Audience Other audiences
Results and Impact Talk on Placental adaptations and developmental programming: why, where and when does it matter?

Joint V SLIMP-Latin American Society for Maternal Fetal Interaction & Placenta and IV LASRI-Latin America Society for Reproductive Immunology, February 18, Iguacu Falls, Brasil

n/a
Year(s) Of Engagement Activity 2013
URL http://www.slimp.org/about-slimp/
 
Description Marabou Symposium 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Invited discussant at a high level workshop on Influences of Nutrition in Human Health and Epigenetics
Year(s) Of Engagement Activity 2015
 
Description Miami 2013 Winter Symposium 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Type Of Presentation Keynote/Invited Speaker
Geographic Reach International
Primary Audience Other audiences
Results and Impact Talk on "Epigenetic Programming of Metabolism across the life course"
Miami 2013 Winter Symposium: The Molecular Basis of Metabolism and Nutrition, Miami, February 10, 2013

n/a
Year(s) Of Engagement Activity 2013
URL http://www.nature.com/natureconferences/miami/mws2013/index.html
 
Description Pint of Science 2022 - Miguel Constancia 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Talk about rare genomic diseases, with a focus on imprinting human disorders
Year(s) Of Engagement Activity 2022
URL https://www.facebook.com/pintofscience/
 
Description Poster Presentation, selected from abstracts for short oral presentation, by Denise Fernandez-Twinn @ Genomic Imprinting conference 2020 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Poster presentation prize winner:

Denise S. Fernandez-Twinn, Ionel Sandovici, Niamh Campbell, Wendy N. Cooper, Ilona Zvetkova, Yoichi Sekita, Lila M. Oyama, Richard G. Kay, Gemma V. Brierley, Haydn Prosser, Katharina Hoelle, Noel Smith, David Ferland-McCollough, Martin Bushell, Anne Willis, Kenneth Siddle, Susan E. Ozanne & Miguel Constância: The imprinted microRNA-483 is a novel regulator of growth and metabolism. Genomic Imprinting - from Biology to Disease (Virtual Conference), 28-30 September 2020
Year(s) Of Engagement Activity 2020
URL https://coursesandconferences.wellcomegenomecampus.org/our-events/genomic-imprinting-2020/
 
Description Press Release University of Cambridge 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Press release by the University of Cambridge regarding a paper published in Developmental Cell. This paper received wide-spread media attention after the press-release (over 90 media outlets, with an altmetric score >790)
Year(s) Of Engagement Activity 2022
URL https://www.communications.cam.ac.uk
 
Description Summer Course San Sebastian 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Type Of Presentation Keynote/Invited Speaker
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Miguel Constancia, 2 invited talks, 26 August 2013, titled " Developmental Origins of Disease and the role of the epigenotype" and "Programmed placental nutrient transport and obesity"

Course Frontiers in Obesity and Nutritional Genomics (J3), Summer Courses of the University of the Basque Country in San Sebastian

n/a
Year(s) Of Engagement Activity 2013
URL http://www.sennutricion.org/en/2013/08/26/frontiers-in-obesity-and-nutritional-genomics