Investigating the role of SOX9 in liver fibrosis
Lead Research Organisation:
University of Manchester
Department Name: Medical and Human Sciences
Abstract
Liver fibrosis is a devastating scarring reaction that results from injury to the liver (e.g. by alcohol or infection). The scarring impairs liver function. The ultimate treatment of liver fibrosis is transplantation. Unfortunately this is limited due to the high numbers of people in need of a transplant. For this reason, identifying effective anti-fibrotic treatments at early stages of disease would be hugely beneficial. To achieve this better understanding of how the scar forms is needed. Although progress has been made in this area, unfortunately there are still no approved anti fibrotic treatments. To tackle this problem, I have identified SOX9 as a core factor responsible for mediating large components of scar formation. It is now essential to determine whether loss of SOX9 can be used as a means of reversing scar formation and ultimately fibrosis in the liver. This project will develop models to test whether loss of Sox9 prevents or ameliorates liver fibrosis and if over-expression of Sox9 worsens or accelerates the disease. In addition, I will discover what other genes lie downstream of SOX9 and integrate these with known signalling pathways important in liver fibrosis to uncover new targets and potential for therapies against liver fibrosis.
Taken together, these experiments are anticipated to prove an important role for Sox9 in organ fibrosis and assist in identifying new pathways of value in the search for new therapies.
Taken together, these experiments are anticipated to prove an important role for Sox9 in organ fibrosis and assist in identifying new pathways of value in the search for new therapies.
Technical Summary
Fibrosis of the liver is characterised by progressive accumulation of ECM proteins and is a major cause of morbidity and mortality in the UK. End-stage liver fibrosis can be treated by liver transplantation, but this is limited by donor numbers. Anti-fibrotic therapies are desperately needed during earlier phases of the disease when the fibrosis is reversible. To achieve this, better mechanistic understanding of liver fibrosis is required. Despite progress in this area, there are still no approved anti fibrotic treatments. To tackle this problem, identifying core factors and their mechanism of action will be highly influential; SOX9 represents one of these factors.
A series of data implicate ectopic expression of the Sry-box transcription factor, SOX9, as important in vitro in hepatic stellate cells and their deposition of extracellular matrix (ECM) characteristic of liver fibrosis. Two pressing challenges are now to test these data in vivo to determine if loss of Sox9 prevents or ameliorates liver fibrosis and if over-expression of Sox9 worsens or accelerates the disease; and to determine the genomic-wide binding of Sox9 to help identify direct genetic targets of Sox9 action and to elucidate the downstream pathways that may facilitate novel therapeutic intervention.
Taken together, these experiments are anticipated to prove an important role for Sox9 in organ fibrosis and assist in identifying new pathways of value in the search for new therapies.
A series of data implicate ectopic expression of the Sry-box transcription factor, SOX9, as important in vitro in hepatic stellate cells and their deposition of extracellular matrix (ECM) characteristic of liver fibrosis. Two pressing challenges are now to test these data in vivo to determine if loss of Sox9 prevents or ameliorates liver fibrosis and if over-expression of Sox9 worsens or accelerates the disease; and to determine the genomic-wide binding of Sox9 to help identify direct genetic targets of Sox9 action and to elucidate the downstream pathways that may facilitate novel therapeutic intervention.
Taken together, these experiments are anticipated to prove an important role for Sox9 in organ fibrosis and assist in identifying new pathways of value in the search for new therapies.
Planned Impact
Liver fibrosis is increasing in incidence and is a major cost to the NHS. It is associated with major morbidity and mortality. Largely, this problem comes from the lack of effective therapies at stages of the disease where the damage is reversible. This makes transplantation the last option and only then for lucky individuals where a donor organ is available. This research project will discover whether loss of the transcription factor SOX9 can ameliorate or reverse fibrosis. It will discover new genes involved in liver fibrosis as downstream targets of SOX9 action and it will place SOX9 in the context of known signalling pathways. All of these steps will increase the likelihood of identifying new candidates for targeted drug development to treat liver fibrosis prior to end-stage disease. Therefore, this work carries substantial health and wealth implications.
People |
ORCID iD |
Karen Piper Hanley (Principal Investigator) |
Publications
Athwal V
(2018)
SOX9 regulated matrix proteins are increased in patients serum and correlate with severity of liver fibrosis
in Scientific Reports
Athwal VS
(2017)
SOX9 predicts progression toward cirrhosis in patients while its loss protects against liver fibrosis.
in EMBO molecular medicine
Baxter M
(2015)
Phenotypic and functional analyses show stem cell-derived hepatocyte-like cells better mimic fetal rather than adult hepatocytes.
in Journal of hepatology
Ezquerro S
(2023)
Antagonic effect of ghrelin and LEAP-2 on hepatic stellate cell activation and liver fibrosis in obesity-associated nonalcoholic fatty liver disease.
in European journal of endocrinology
Gerrard DT
(2020)
Dynamic changes in the epigenomic landscape regulate human organogenesis and link to developmental disorders.
in Nature communications
Gerrard DT
(2016)
An integrative transcriptomic atlas of organogenesis in human embryos.
in eLife
Jennings RE
(2013)
Development of the human pancreas from foregut to endocrine commitment.
in Diabetes
Description | Chiesi medical grant in Cystic Fibrosis. "Investigating advanced diagnostics for liver related complications in cystic fibrosis". |
Amount | £25,942 (GBP) |
Organisation | Chiesi |
Sector | Private |
Country | Italy |
Start |
Description | Dean's Prize for clinical academics: Dr Varinder Athwal |
Amount | £250,000 (GBP) |
Organisation | University of Manchester |
Sector | Academic/University |
Country | United Kingdom |
Start |
Description | Guts UK (Charity) Development Grant. Investigating fibrosis pathobiology in cystic fibrosis related liver disease to improve clinical detection and management. |
Amount | £33,011 (GBP) |
Organisation | British Society of Gastroenterology |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start |
Description | Innovate UK, Life Sciences Industrial Strategy Challenge Fund on 'Integrated Diagnostics for Early Detection'. Integrated Diagnostics for the Early Detection of Liver Disease (ID_LIVER) |
Amount | £2,500,000 (GBP) |
Organisation | University of Manchester |
Sector | Academic/University |
Country | United Kingdom |
Start | 08/2020 |
End | 08/2023 |
Description | Interrogating mechanical signals in liver fibrosis for anti-fibrotic therapy; North West England MRC Fellowship in Clinical Pharmacology and Therapeutics |
Amount | £250,000 (GBP) |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 09/2018 |
End | 09/2021 |
Description | MRC Clinical Training Fellow |
Amount | £180,000 (GBP) |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 09/2012 |
End | 09/2014 |
Description | Understanding the role of ITGA11 in renal fibrosis to advance diagnostic and therapeutic strategies |
Amount | £12,612 (GBP) |
Organisation | Kidneys for Life |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 03/2017 |
End | 02/2018 |
Description | University of Manchester PhD MRC doctoral training account |
Amount | £80,000 (GBP) |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 09/2012 |
End | 09/2016 |
Description | University of Manchester PhD MRC doctoral training account |
Amount | £80,000 (GBP) |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 09/2014 |
End | 09/2018 |
Description | Fibrotic mechanisms - Edinburgh |
Organisation | University of Edinburgh |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Intellectual ideas and research planning. |
Collaborator Contribution | Material distribution. |
Impact | Manuscript published in Nature Comms 016. Direct collaborator included on current MRC project grant (2017-2020) |
Start Year | 2013 |
Title | Prediction and treatment of progressive fibrosis |
Description | The present invention relates to methods of predicting a subject's likelihood of developing progressive fibrosis. The invention also relates to methods of selecting an appropriate treatment regiment for the treatment of fibrosis in a subject. The invention also relates to a method of treating progressive fibrosis in a subject. |
IP Reference | GB201507371 |
Protection | Patent application published |
Year Protection Granted | 2014 |
Licensed | No |
Impact | A manuscript is i preparation for high impact publication. |
Title | SOX9 As Target For Fibrosis Therapy |
Description | The present invention relates to targeting of expression of the transcription factor SOX9 for treatment of conditions associated with aberrant expression of extracellular matrix (ECM) components resulting from up-regulation of SOX9 such as, for example, expression of collagens and other structural proteins resulting in liver fibrosis. |
IP Reference | GB0709506.0 |
Protection | Patent granted |
Year Protection Granted | 2007 |
Licensed | No |
Impact | Additional publications PMID 22488688 |
Title | Prediction and treatment of progressive fibrosis |
Description | We have discovered a marker to predict individuals who will progress with fibrosis at an early stage of disease. This test has been investigated in one fibrotic aetiology to date and we are actively pursuing additional cohorts and diseases to test this in. Currently in close discussion with our IP department and have had market scoping exercise carried out. Looking at obtaining TSB funding either by generating a spin out company or through industrial partner. |
Type | Diagnostic Tool - Non-Imaging |
Current Stage Of Development | Initial development |
Year Development Stage Completed | 2013 |
Development Status | Actively seeking support |
Impact | Patented technology and manuscript in preparation. Potential for company spin-out or up-take from industry. |
Description | 1st International Conference on Hippo signalling, Oxford. |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Other audiences |
Results and Impact | Lecture on our research where it included mechanotransduction related to YAP-1. New discussion and collaborations. |
Year(s) Of Engagement Activity | 2016 |
Description | BASL |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Other audiences |
Results and Impact | Invited lecture on work with collaborative discussion to follow. |
Year(s) Of Engagement Activity | 2017 |
Description | Conference (AASLD 2012) |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | Yes |
Type Of Presentation | Paper Presentation |
Geographic Reach | International |
Primary Audience | Other academic audiences (collaborators, peers etc.) |
Results and Impact | AASLD conference, 9-13th November 2012, Boston, USA. Understanding the molecular mechanisms of liver fibrosis provides insight into novel biomarkers of disease. Varinder Athwal, James Pritchett, Emma Harvey, Philip Ireland, Katherine Martin, Grace Dolman, William Irving, Neil Guha, Neil Hanley and Karen Piper Hanley. Oral presentation of research at international conference. Developing biomarkers for liver disease is an intense area f research and the talk will have been attended by key individuals across bot academia and industry at the forefront of developing these technologies. Our research will impact on this area. |
Year(s) Of Engagement Activity | 2012 |
URL | http://www.aasld.org |
Description | Conference (EASL oral-poster 2014) |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | This was a chosen abstract for a poster oral (and bursary award). There has been intense interest in this work following on from the presentation. Intense interest in this piece of work - notable by additional talk invites and prizes. |
Year(s) Of Engagement Activity | 2014 |
Description | Conference (EASL poster 2013) |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | Yes |
Type Of Presentation | Poster Presentation |
Geographic Reach | International |
Primary Audience | Other academic audiences (collaborators, peers etc.) |
Results and Impact | EASL, 24-28th April 2013, Amsterdam. Understanding integrin signalling during liver fibrosis provides insight into their modulation as a therapeutic strategy to treat the disease Katherine Martin, James Pritchett, Emma Harvey, Varinder Athwal, Charles Streuli, Neil Hanley and Karen Piper Hanley Poster presentation significant interest in integrin signalling in liver disease. |
Year(s) Of Engagement Activity | 2013 |
URL | http://www.easl.eu |
Description | Conference (poster AASLD 2012) |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | Yes |
Type Of Presentation | Poster Presentation |
Geographic Reach | International |
Primary Audience | Other academic audiences (collaborators, peers etc.) |
Results and Impact | AASLD, 9-13th November 2012, Boston, USA. Epimorphin signalling is associated with a quiescent-like HSC phenotype with implications for non invasive assay development in liver fibrosis James Pritchett, Varinder S Athwal, Emma Harvey, Katherine Martin, Philip Ireland, Alexander Nicolaides, William L Irving, Indra N Guha, Neil A Hanley, Karen Piper Hanley Significant interest in non invasive markers of disease with good attendance at poster. |
Year(s) Of Engagement Activity | 2012 |
URL | http://www.aasld.org |
Description | Keystone Fibrosis meeting 2014 - clinical fellow |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Intense discussions following talk and following the paper presented in evening poster session. Collaborations and increased activity for follow-up discussions. |
Year(s) Of Engagement Activity | 2014 |
Description | Keystone Fibrosis meeting 2014 - postdoc |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Talk to international audience and evening poster presented on same topic. Intense interest for discussions followed. Scientific collaboration / interaction. |
Year(s) Of Engagement Activity | 2014 |
Description | Lab visit (University of Manchester) |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Type Of Presentation | Workshop Facilitator |
Geographic Reach | Regional |
Primary Audience | Schools |
Results and Impact | A level students from across the region invited to take part in a week long educational practical session on medical science. In addition given the opportunity to discuss careers with University based scientists with various backgrounds. Annual event. |
Year(s) Of Engagement Activity | 2013 |
Description | Manchester Science Week |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | Yes |
Type Of Presentation | Workshop Facilitator |
Geographic Reach | Regional |
Primary Audience | Public/other audiences |
Results and Impact | A public event for adults and children with activities to engage the audience in basic science and technology. Allows hands on interaction and discussions with scientists. Annual event |
Year(s) Of Engagement Activity | 2011,2012,2013 |
Description | North West regional Gastro. Conference 2012 |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Discussed broadly following talk - won prize for presentation. Oral prize. |
Year(s) Of Engagement Activity | 2012 |
Description | North West regional Gastro. Conference 2014 |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Exciting discussions after talk and awarded best research paper presented. Awarded prize for best research paper. Data in preparation for manuscript submission (Dec 2014). |
Year(s) Of Engagement Activity | 2014 |
Description | School visit (Manchester) |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Type Of Presentation | Workshop Facilitator |
Geographic Reach | Local |
Primary Audience | Schools |
Results and Impact | Researcher in residence - Scientific presentations and discussion to A level students to initiate interest in careers in the general area on science and technology. Also as general educational presentation. This is an on-going annual event. |
Year(s) Of Engagement Activity | 2010,2011,2012,2013 |
Description | Talk in industry at UCB London |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Invited talk on fibrosis to industry - discussions on developing reagents for use in models. |
Year(s) Of Engagement Activity | 2017 |