Ultrasound for rapid and uniform rewarming of large volumes of cells and tissues after cryopreservation

Lead Research Organisation: University College London
Department Name: Medical Physics and Biomedical Eng

Abstract

Over 120,000 people in the USA and over 6000 people in the UK are waiting for organ transplants, and many more are suffering from organ failure. Many donor organs are not transplanted (approximately 60% of donor hearts and 20% of kidneys are not used), often because they can only be kept for a short time. Long term preservation would mean better matching with recipients over larger geographical areas, reducing the chances of rejection and increasing the number of organs that could be used. One potentially transformative method of preserving organs for a longer time is cryopreservation. This involves freezing the organs at very low temperatures and then defrosting them when needed.

However, this is currently limited to small volumes (<3 ml), largely due to the difficulty in rewarming the tissues without damage after freezing. To avoid damage on rewarming, tissues must be heated quickly and uniformly. This is not possible with existing water bath methods so the development of new methods for volumetric rewarming of large tissue volumes is critical.

The aim of this fellowship is to develop a novel method of tissue rewarming using ultrasound. As ultrasound passes through frozen tissue, it loses energy which is deposited as heat. By controlling the pattern of the ultrasound waves entering the tissue, heat can be deposited as needed to raise the temperature of the tissue quickly and uniformly. First, the ultrasound parameters will be optimised for maximum cell viability and optimal heating rate using small volumes of cells. An ultrasound array based on these parameters will then be developed with methods of steering and shaping the acoustic field to uniformly and rapidly heat larger volumes of cells. This will be extended to warming tissues with inhomogeneous acoustic and thermal properties and larger volumes, using real time feedback to control the heating distribution, with the ultimate vision of creating a fully flexible tool that can be used to rewarm whole organs. Ultrasonic volumetric warming has the potential to enable long-term storage of tissues and organs which would transform the availability of organs for transplant. It would also have many other applications such as increasing access to therapies involving implanting cells and tissues in the body for diseases such as type 1 diabetes or for restoration of fertility after cancer therapy.

Planned Impact

In the long term, ultrasonic rewarming will enable the successful cryopreservation of large volumes of cells, tissues and whole organs. This will help to enable organ banks for on-demand supply of donor organs, bioartificial organs, tissues and cell therapy products. This capacity will lead to improvement in treatment for people suffering from a vast number of conditions, significantly reducing morbidity and mortality, adding quality-adjusted life years for patients, as well as reducing costs of ongoing care and patient support. In general, the main beneficiaries in this context include: (1) people suffering from organ failure, who could be treated by organ transplant; (2) sufferers of diseases which result in compromised organ function, usually treated by means other than transplants, e.g. type 1 diabetes; (3) child and young adult cancer survivors in whom fertility may be restored by preservation and autotransplantation of reproductive tissues. Additionally, the wider public and patient population will benefit from the increased effectiveness of the health service due to cost savings and availability of more advanced therapies.

Preservation and re-implantation of ovarian tissue for restoration of fertility in child and young adult cancer survivors is now offered as a clinical service at a number of hospitals worldwide. Around 100 live births have been reported so far as a result, with huge impact on the quality of life of these patients, but the chance of success is currently around 50%. Increased success could be achieved by improving tissue viability. This could be achieved with more consistent and optimised rewarming of the tissues. Clinical translation of ultrasonic rewarming will be pursued to deliver this impact in the shorter term. In the longer term, the technique could also be extended to the re-implantation of whole ovaries and testes.

Almost 10% of patients of the transplant list are waiting for a liver. With increases in liver disease resulting in increased demand for (usually urgent) transplants, the use of a bioartificial liver is an important alternative. Widespread clinical use would require on-demand access to large volumes of cells, which would be enabled by the development and clinical translation of ultrasonic rewarming in the medium term.

In the long term, increased rates of organ transplant and access to cell therapies, enabled by storage and preservation of cells and donor organs, would provide significant savings in NHS spending. For example, almost 80% of the 6000 people currently on the UK transplant list are waiting for kidney transplants, with a mean waiting time of over 2 years, and a further 30,000 people in the UK are currently on dialysis. The cost of medication and aftercare following a kidney transplant is approximately 15% of the cost of renal dialysis (which costs the NHS over £0.5bn pa), and allows patients to return to a quality of life similar to that which they experienced before becoming ill. In terms of cell therapies, one example is islet cell transplant to restore insulin production, which can cure type 1 diabetes, reducing morbidity and dramatically reducing the cost of ongoing care and support (~£2bn pa) of these patients.

There are a huge number of potential applications of cryopreservation of cells, tissues and organs. To fit with a future vision of organ banks and centralised infrastructure for cell therapy manufacturing and distribution, rewarming equipment will need to be widespread for local access. The developed devices will be commercially attractive. Commercial translation will be pursued and it is expected the generated IP will lead to licensing agreements or the development of new start-ups, with the UK becoming a base for future international investment. This would expand the cryochain industry, generating new jobs and revenue. The devices will also be of commercial value as a research platform for cryopreservation and cryobiology research.

Publications

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Martin E (2020) Experimental Validation of k-Wave: Nonlinear Wave Propagation in Layered, Absorbing Fluid Media. in IEEE transactions on ultrasonics, ferroelectrics, and frequency control

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Roberts M (2023) open-UST: An Open-Source Ultrasound Tomography Transducer Array System. in IEEE transactions on ultrasonics, ferroelectrics, and frequency control

 
Description So far, we have demonstrated the concept of ultrasonic rewarming of frozen biological tissue. Using a simple ultrasonic system with focal geometry matched to a 2 mL cryovial, tissue was warmed from -20 degrees C to 5 degrees C. The mean rate of heating was approximately 10 times faster with ultrasound plus thermal conduction compared to thermal conduction alone. These findings provide the foundation for further development and optimisation of this technology.
Exploitation Route Contributing knowledge to the field which may be of use to other researchers working in the same area, for example identifying the frequency parameters and coupling materials suitable for ultrasound rewarming.
Sectors Healthcare,Manufacturing, including Industrial Biotechology

 
Description Closed-loop Individualized image-guided Transcranial Ultrasonic Stimulation
Amount € 3,999,439 (EUR)
Funding ID 101071008 
Organisation European Commission H2020 
Sector Public
Country Belgium
Start 10/2022 
End 09/2026
 
Title DRUM: Data-repository for biomedical ultrasound metrology 
Description Experimental measurements of acoustic fields are critical for the development of medical ultrasound software and devices, including for validation of modelling tools and for comparison of measurement equipment and protocols. Data sharing encourages reproducibility and consistency across labs, provides access to other researchers who may not have the equipment or expertise to conduct their own measurements, and provides data which can be used for cross validation of models across the research community. To promote and enable sharing of biomedical ultrasound metrology data across the international community, this open access subject repository has been established within the University College London Research Data Repository. Contributions from research groups across the community are welcomed with the prerequisite that the data supports a peer reviewed publication. All datasets will be released under suitable creative commons licences and assigned a digital object identifier which will form a permanent link to the data which can be used for retrieval and citation of datasets. The repository currently hosts data associated with our published work on ultrasound metrology field characterisation, metrology, and model validation: http://bug.medphys.ucl.ac.uk/research Each record contains one or more .h5 files in which the data is organised under a standard set of fields, containing information on the properties of the sources and sensors and equipment in the signal chains used for measurements; the propagation medium which includes details of any inclusions e.g. tissue or phantoms; the acoustic measurement data and its metadata, and details of the driving conditions under which the measurements were made. A description of the standard file format and its fields can be found at: http://bug.medphys.ucl.ac.uk/data-repository. Each record is also accompanied by metadata (including a DOI, and DOIs of related published articles) by which the records can be searched, and optionally by supplementary material not covered by the standard data file format. 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact The database currently hosts data associated with our published work on ultrasound metrology field characterisation, metrology, and model validation, allowing others to replicate published studies, or to use the data for validation and benchmarking of experimental or simulation work. The database has been available since March 2021 so the impact is not yet evident. 
URL https://rdr.ucl.ac.uk/projects/DRUM_Data-repository_for_biomedical_ultrasound_metrology/73251
 
Title Experimental Assessment of Skull Aberration and Transmission Loss at 270 kHz for Focused Ultrasound Stimulation of the Primary Visual Cortex 
Description This data was collected in order to assess acoustic field aberrations and transmission loss induced by human skulls in the context of focused ultrasound stimulation of the primary visual cortex (V1) region of the brain. A 2 element spherically focusing annular array ultrasound transducer (H115, driven at 270 kHz, Sonic Concepts) was used to generate an acoustic field. Measurements were performed with a 0.2 mm PVDF needle hydrophone (Precision Acoustics) with right angle connector to reduce its length so it could be accommodated within the skull cavity. The transducer was driven under quasi continuous wave conditions at low drive level to produce a linear field. The transducer was held in a fixed position, the skull was positioned to obtain the correct focal alignment and the hydrophone was held in a 3D printed mount with manual alignment in the axial direction and automated scanning in the lateral directions. Measurements were performed inside 3 human skulls which had previously had the superior section of the parietal and frontal bones removed. Measurements were made with the transducer positioned at two locations for each skull corresponding to the focal region intersecting with the positions of the left and right V1 regions of the brain, with a 1 cm separation between source and skull. For each position, the hydrophone was aligned with the focus inside the skull, then a planar scan was performed covering the largest possible area while avoiding collision of the hydrophone with the skull bone. The skull was then removed and a 2nd scan was performed in water as a reference, the axial position was determined from time of flight in free field during these reference water scans. The study consists of 6 datasets, each of which contains a planar scan made within the skull cavity, and a reference planar scan in water after the skull was removed, preserving the coordinates. File 1: skull 2120, left V1 File 2: skull 2120, right V1 File 3: skull 2150, left V1 File 4: skull 2150, right V1 File 5: skull 2125, left V1 File 6: skull 2125, right V1 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact This dataset has had over 100 downloads, and has informed other research performed in the group on transcranial ultrasound. 
URL https://rdr.ucl.ac.uk/articles/dataset/Experimental_Assessment_of_Skull_Aberration_and_Transmission_...
 
Title Experimental Validation of k-Wave: Nonlinear Wave Propagation in Layered, Absorbing Fluid Media 
Description The data was collected for characterisation of the source, a single element spherically focusing ultrasound transducer driven with a 4 cycle burst at 1.1 MHz (H151, Sonic Concepts), and validation of simulation of the source propagating into water at a number of different drive levels. Measurements were also made for experimental validation of simulation of a nonlinear ultrasound field propagating through planar and wedge shaped glycerol filled phantoms. All measurements were made with a PVDF needle hydrophone in an automated scanning tank. The study data contains 3 files: 1 containing measurements made in water, 1 with a planar glycerol filled phantom and 1 with a wedge shaped glycerol filled phantom. File 1, medium: water only: Axial scans cover 30 to 200 mm, lateral scans cover -20 to 20 mm. 1: XY planar scan for source characterisation at low drive level, measured at z = 40 mm over a 52 by 52 mm plane. 2 - 7: Axial scans from 30 to 200 mm, at the lowest drive level (as used in 1), 6 repeats. (Fig 2,3) 8: lateral scan, level 1 (Fig 2,3) 9-11: Axial scans, level 2 (Fig 3) 12-13: lateral scans level 2 (Fig 3) 14-16: axial scans level 3 (Fig 3) 17-18: lateral scans level 3 (Fig 3) 19-21: axial scans level 4 (Fig 3) 22-23: lateral scans level 4 (Fig 3) 24-26: Axial scans level 5 (Fig 3) 27-28: lateral scans level 5 (Fig 3) 29-33: axial scans level 6 (Figs 3, 4) 34-38: lateral scans level 6 (Figs 3, 4) File 2: medium: water background with planar glycerol phantom 1: XZ planar scan from x = -20 mm to 20 mm, z = 60 to 200 mm (beyond phantom) (Figs 5-7) File 3: medium: water background with wedge shaped glycerol phantom 1: XZ planar scan from x = -20 to 20 mm, z = 70 to 200 mm (beyond phantom) (Figs 8-10) 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact This dataset has had over 100 downloads 
URL https://rdr.ucl.ac.uk/articles/dataset/Experimental_Validation_of_k-Wave_Nonlinear_Wave_Propagation_...
 
Title Experimental Validation of k-Wave: Nonlinear Wave Propagation in Layered, Absorbing Fluid Media 
Description The data was collected for characterisation of the source, a single element spherically focusing ultrasound transducer driven with a 4 cycle burst at 1.1 MHz (H151, Sonic Concepts), and validation of simulation of the source propagating into water at a number of different drive levels. Measurements were also made for experimental validation of simulation of a nonlinear ultrasound field propagating through planar and wedge shaped glycerol filled phantoms. All measurements were made with a PVDF needle hydrophone in an automated scanning tank. The study data contains 3 files: 1 containing measurements made in water, 1 with a planar glycerol filled phantom and 1 with a wedge shaped glycerol filled phantom. File 1, medium: water only: Axial scans cover 30 to 200 mm, lateral scans cover -20 to 20 mm. 1: XY planar scan for source characterisation at low drive level, measured at z = 40 mm over a 52 by 52 mm plane. 2 - 7: Axial scans from 30 to 200 mm, at the lowest drive level (as used in 1), 6 repeats. (Fig 2,3) 8: lateral scan, level 1 (Fig 2,3) 9-11: Axial scans, level 2 (Fig 3) 12-13: lateral scans level 2 (Fig 3) 14-16: axial scans level 3 (Fig 3) 17-18: lateral scans level 3 (Fig 3) 19-21: axial scans level 4 (Fig 3) 22-23: lateral scans level 4 (Fig 3) 24-26: Axial scans level 5 (Fig 3) 27-28: lateral scans level 5 (Fig 3) 29-33: axial scans level 6 (Figs 3, 4) 34-38: lateral scans level 6 (Figs 3, 4) File 2: medium: water background with planar glycerol phantom 1: XZ planar scan from x = -20 mm to 20 mm, z = 60 to 200 mm (beyond phantom) (Figs 5-7) File 3: medium: water background with wedge shaped glycerol phantom 1: XZ planar scan from x = -20 to 20 mm, z = 70 to 200 mm (beyond phantom) (Figs 8-10) 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact
URL https://rdr.ucl.ac.uk/articles/dataset/Experimental_Validation_of_k-Wave_Nonlinear_Wave_Propagation_...
 
Title Measurement and simulation of steered acoustic fields generated by a multielement array for therapeutic ultrasound 
Description This data was collected to evaluate the effect of element size, element positions, relative source pressure variations, and electrical crosstalk on the accuracy of modelling pressure fields generated by a 555 kHz 32-element ultrasonic array. The transducer was assembled from 32 individual 3mm diameter plane circular piezo-ceramic elements (XDR107, Sonic Concepts, Bothell, WA) arranged in a pseudorandom configuration in a three-dimensional (3D) printed spherical cap holder, with radius of curvature 80mm and aperture diameter 70 mm. Measurements were performed with a 0.2 mm PVDF needle hydrophone (Precision Acoustics) to characterise the source under quasi steady state conditions (35 cycle burst). All measurements were acquired using an automated scanning tank filled with degassed, deionised water. The transducer was mounted in a fixed xyz position. Hydrophones were mounted on an automated xyz stage, with manual tilt, rotate adjustment. Planar scans in the prefocal region were obtained to charaterise the source under 3 driving conditions: with all elements driven with equal amplitude and phase, with phase corrections applied which were obtained from hydrophone measurements at the geometric focus position, and with these corrections plus further geometrically calculated phase offsets to steer the array focus to x = 20 mm, y = -20 mm. A further set of line scans passing through the focus was obtained for the equalised unsteered case, focal steering to x = -20 mm y = 20 mm, and 8 further steered focal positions. In total, this study contains 33 datasets contained in 1 file, the corresponding figure or table in the paper is given in brackets. 1. Planar scan at 56 mm, unsteered without phase corrections 2. Planar scan at 56 mm, unsteered with phase corrections from hydrophone measurements at geometric focus (Fig 1) 3-5. X,Y,Z line scans through the focus, unsteered with phase corrections 6. Planar scan at 50 mm, with phase corrections + steered to x = 20 mm, y = 20 mm 7-9 X,Y,Z line scans through the focus, with phase corrections + steered to x = 20 mm, y = 20 mm 10-12 X,Y,Z line scans through the focus, with phase corrections + steered to z = 100 mm (Fig 2a) 13-15 X,Y,Z line scans through the focus, with phase corrections + steered to z = 70 mm 16-18 X,Y,Z line scans through the focus, with phase corrections + steered to x = 5 mm 19-21 X,Y,Z line scans through the focus, with phase corrections + steered to x = 10 mm 22-24 X,Y,Z line scans through the focus, with phase corrections + steered to x = 20 mm (Fig 2b) 25-27 X,Y,Z line scans through the focus, with phase corrections + steered to x = 40 mm (Fig 2c) 28-30 X,Y,Z line scans through the focus, with phase corrections + steered to y = -10 mm 31-33 X,Y,Z line scans through the focus, with phase corrections + steered to x = 10 mm, y = -10 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
Impact n/a 
URL https://rdr.ucl.ac.uk/articles/dataset/Measurement_and_simulation_of_steered_acoustic_fields_generat...
 
Title Measurement and simulation of steered acoustic fields generated by a multielement array for therapeutic ultrasound 
Description This data was collected to evaluate the effect of element size, element positions, relative source pressure variations, and electrical crosstalk on the accuracy of modelling pressure fields generated by a 555 kHz 32-element ultrasonic array. The transducer was assembled from 32 individual 3mm diameter plane circular piezo-ceramic elements (XDR107, Sonic Concepts, Bothell, WA) arranged in a pseudorandom configuration in a three-dimensional (3D) printed spherical cap holder, with radius of curvature 80mm and aperture diameter 70 mm. Measurements were performed with a 0.2 mm PVDF needle hydrophone (Precision Acoustics) to characterise the source under quasi steady state conditions (35 cycle burst). All measurements were acquired using an automated scanning tank filled with degassed, deionised water. The transducer was mounted in a fixed xyz position. Hydrophones were mounted on an automated xyz stage, with manual tilt, rotate adjustment. Planar scans in the prefocal region were obtained to charaterise the source under 3 driving conditions: with all elements driven with equal amplitude and phase, with phase corrections applied which were obtained from hydrophone measurements at the geometric focus position, and with these corrections plus further geometrically calculated phase offsets to steer the array focus to x = 20 mm, y = -20 mm. A further set of line scans passing through the focus was obtained for the equalised unsteered case, focal steering to x = -20 mm y = 20 mm, and 8 further steered focal positions. In total, this study contains 33 datasets contained in 1 file, the corresponding figure or table in the paper is given in brackets. 1. Planar scan at 56 mm, unsteered without phase corrections 2. Planar scan at 56 mm, unsteered with phase corrections from hydrophone measurements at geometric focus (Fig 1) 3-5. X,Y,Z line scans through the focus, unsteered with phase corrections 6. Planar scan at 50 mm, with phase corrections + steered to x = 20 mm, y = 20 mm 7-9 X,Y,Z line scans through the focus, with phase corrections + steered to x = 20 mm, y = 20 mm 10-12 X,Y,Z line scans through the focus, with phase corrections + steered to z = 100 mm (Fig 2a) 13-15 X,Y,Z line scans through the focus, with phase corrections + steered to z = 70 mm 16-18 X,Y,Z line scans through the focus, with phase corrections + steered to x = 5 mm 19-21 X,Y,Z line scans through the focus, with phase corrections + steered to x = 10 mm 22-24 X,Y,Z line scans through the focus, with phase corrections + steered to x = 20 mm (Fig 2b) 25-27 X,Y,Z line scans through the focus, with phase corrections + steered to x = 40 mm (Fig 2c) 28-30 X,Y,Z line scans through the focus, with phase corrections + steered to y = -10 mm 31-33 X,Y,Z line scans through the focus, with phase corrections + steered to x = 10 mm, y = -10 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
Impact
URL https://rdr.ucl.ac.uk/articles/dataset/Measurement_and_simulation_of_steered_acoustic_fields_generat...
 
Title Modelling nonlinear ultrasound propagation in absorbing media using the k-Wave toolbox: Experimental validation 
Description This data was collected to validate simulations performed using the k-Wave toolbox when the wave propagation is nonlinear and the medium is absorbing. Experiments were conducted using a diagnostic ultrasound scanner (Sonix RP, Ultrasonix) with a linear array probe (L9-4/38) in both water and olive oil. Measurements were performed using a two-axis automated scanning tank with a 0.4 mm membrane hydrophone. The coordinate system used is as follows: X is the elevation direction relative to the transducer (out-of-plane), Y is the lateral (in-plane) direction, Z is the axial direction. In total, this study contains 12 datasets contained in 4 files as follows. File 1. X-Y scans of transducer in water with no steering (4 datasets with planes measured at 1.3, 11.1, 21.3, and 31.3 mm from the transducer). File 2. X-Y scans of transducer in water with a steering angle of 20 degrees (2 datasets with planes measured at 1.3 and 21.3 mm from the transducer). File 3. Y-Z scans of the transducer in water with steering angles of 0 (no steering) and 20 degrees (2 datasets). File 4. X-Y scans of transducer in olive oil with no steering (4 datasets with planes measured at 2.4, 12.4, 22.4, 32.4 mm from the transducer). A MATLAB script is provided to produce simple summary plots of the data. Notes: For all X-Y scans, the reported Z-positions are approximate. Z-alignment was performed using a manual translation stage, and the position of the transducer relative to the hydrophone in the first scan plane was estimated using a diagnostic ultrasound image. A more accurate estimate could potentially be obtained using the time-of-flight data for the recorded waveforms. For dataset 3, the reported X-Y coordinate origin for the scan plane at 2.39mm (dataset1) is not aligned with the X-Y coordinate origin for the other scan planes (dataset2, dataset3, dataset4). This could potentially be corrected, e.g., using acoustic holography and aligning the projections to the measured planes. 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
Impact
URL https://rdr.ucl.ac.uk/articles/dataset/Modelling_nonlinear_ultrasound_propagation_in_absorbing_media...
 
Title Rapid Spatial Mapping of Focused Ultrasound Fields Using a Planar Fabry-Pérot Sensor 
Description The data was acquired in order to investigate the potential of a robust planar Fabry-Pérot sensor for measurement of high acoustic pressures. The sensor was formed from all hard dielectric materials, and designed to operate at 1550 nm, coupled with a C-L (1516-1610 nm) band wavelength tunable laser and rapid scanning system. A set of measurements of the field of a single element spherically focusing HIFU transducer (H101, Sonic Concepts) driven at 1.1 MHz with a 4 cycle burst, was made with the sensor at a variety of drive levels, which at the lower end was compared against hydrophone measurements (0.2 mm PVDF needle hydrophone, Precision Acoustics), and at the higher end was beyond the damage threshold of conventional commercially available PVDF hydrophones, and was compared with KZK simulations of the field. Volume scans were also performed to demonstrate the feasibility of these given the rapid scan times. The transducer was mounted pointing downwards into a small temperature controlled tank filled with degassed, deionised water, with manually adjustable xyz position. The Fabry-Perot sensor was mounted in the bottom of the tank in a fixed position, and measurements were taken over the sensor area by scanning the interrogation laser beam. The directional frequency response of the sensor is included in the frequency response field in the sensor dataset. This has size [1002, 978, 3], where [:, 1, :] contains the frequency, [1, :, :] contains the angles, [2:end, 2:end , 1] is the magnitude response, [2:end, 2:end, 2] is the phase response, and [2:end, 2:end, 3] is the smoothed/corrected magnitude correction (1/mag response) that as applied to the data. In total, this records contains 5 data files: 1. Planar field scan acquired with the Fabry Perot sensor at the focal plane at low level, for comparison with hydrophone scans (Fig4). 2. Planar scans at the focal plane at three drive levels (Fig 5). 3. Small area planar scans at the focal plane at 22 different drive levels, 6 repeats up to level 13, 3 repeats at levels 13-22: 94 datasets (Fig 6). 4. Planar scans at three different axial positions at an intermediate drive level. (Fig 7). 5. Hydrophone scans: a planar scan used to define the source boundary condition for KZK simulations performed as a comparison with scans in file 2. A lateral line scan acquired for comparison with the Fabry-Perot scan in file 1. 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact This dataset has had over 100 downloads 
URL https://rdr.ucl.ac.uk/articles/dataset/Rapid_Spatial_Mapping_of_Focused_Ultrasound_Fields_Using_a_Pl...
 
Title Repeatability and reproducibility of hydrophone measurements of medical ultrasound fields 
Description This data was collected in order to study the repeatability and reproducibility of hydrophone measurements of ultrasound fields. Sets of independent measurements were made with two probe (0.2 mm, 40 µm) and two membrane hydrophones (0.4 mm, 0.2 mm differential) (all from Precision Acoustics) to examine the repeatability of measurements. The pressures measured by these hydrophones in three different ultrasound fields, with both linear and nonlinear, pulsed and steady state driving conditions, were acquired to assess the reproducibility of measurements between hydrophones. Repeatability measurements: Sets of five independent measurements were made with each hydrophone of the field generated by a single element focusing bowl transducer (Sonic Concepts H151) driven at a frequency of 1.1 MHz, with both a 4 cycle burst and under quasi steady state conditions. Axial and lateral line scans passing through the focus were acquired at a drive level which generated a weakly nonlinear field. Reproducibility measurements: Two single element focusing bowl transducers (H151 at 1.1 MHz, and H101 at 3.3 MHz, Sonic Concepts) and one diagnostic linear array (L14-5 at 5 MHz, Ultrasonix) sources were used. For the single element transducers, axial and lateral line scans passing through the focus were acquired with each hydrophone at two drive levels to generate both a linear and a weakly nonlinear field, with both a 4 cycle burst and under quasi steady state conditions. For the diagnostic linear array, lateral line scans were acquired passing through the beam axis at an axial distance of 40 mm. The transducer was driven with a 4 cycle burst at a power level that generated harmonics up to 30 MHz. All measurements were acquired using an automated scanning tank filled with degassed, deionised water. The transducers mounted in a fixed xyz position with automated tilt, rotate adjustment. Hydrophones were mounted on an automated xyz stage, with manual tilt, rotate adjustment. In total this study contains 12 datasets, the corresponding figure or table in the paper is given in brackets: 1-4: Repeatability and reproducibility - H151 x 4 hydrophones (Figs 1-4, Table 3) Each dataset contains axial and lateral line scans at 2 drive levels, with a 4 cycle and a 40 cycle burst, with 5 sets of scans at the high drive level and one set of scans at the low drive level 5-8: Reproducibility - H101 x 4 hydrophones (Figs 4-5, Table 3) Each dataset contains a single set of axial and lateral line scan at each of 2 drive levels, with a 4 cycle and a 120 cycle burst. 9-12: Reproducibility - L14-5 x 4 hydrophones (Fig 6, Table 3) Each dataset contains lateral scans at 1 power level. 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact
URL https://rdr.ucl.ac.uk/articles/dataset/Repeatability_and_reproducibility_of_hydrophone_measurements_...
 
Title Repeatability and reproducibility of hydrophone measurements of medical ultrasound fields. 
Description This data was collected in order to study the repeatability and reproducibility of hydrophone measurements of ultrasound fields. Sets of independent measurements were made with two probe (0.2 mm, 40 µm) and two membrane hydrophones (0.4 mm, 0.2 mm differential) (all from Precision Acoustics) to examine the repeatability of measurements. The pressures measured by these hydrophones in three different ultrasound fields, with both linear and nonlinear, pulsed and steady state driving conditions, were acquired to assess the reproducibility of measurements between hydrophones. Repeatability measurements: Sets of five independent measurements were made with each hydrophone of the field generated by a single element focusing bowl transducer (Sonic Concepts H151) driven at a frequency of 1.1 MHz, with both a 4 cycle burst and under quasi steady state conditions. Axial and lateral line scans passing through the focus were acquired at a drive level which generated a weakly nonlinear field. Reproducibility measurements: Two single element focusing bowl transducers (H151 at 1.1 MHz, and H101 at 3.3 MHz, Sonic Concepts) and one diagnostic linear array (L14-5 at 5 MHz, Ultrasonix) sources were used. For the single element transducers, axial and lateral line scans passing through the focus were acquired with each hydrophone at two drive levels to generate both a linear and a weakly nonlinear field, with both a 4 cycle burst and under quasi steady state conditions. For the diagnostic linear array, lateral line scans were acquired passing through the beam axis at an axial distance of 40 mm. The transducer was driven with a 4 cycle burst at a power level that generated harmonics up to 30 MHz. All measurements were acquired using an automated scanning tank filled with degassed, deionised water. The transducers mounted in a fixed xyz position with automated tilt, rotate adjustment. Hydrophones were mounted on an automated xyz stage, with manual tilt, rotate adjustment. 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact The dataset has approximately 100 downloads 
URL https://doi.org/10.5522/04/14217044.v1
 
Title Sensitivity of simulated transcranial ultrasound fields to acoustic medium property maps 
Description This data was collected in order to validate models of ultrasound propagation through skull bone phantoms. A single element spherically focusing ultrasound transducer (PA332 at 1 MHz, Precision Acoustics) was used to generate an acoustic field. Measurements were performed with a 0.2 mm PVDF needle hydrophone (Precision Acoustics) to characterise the source under short burst conditions (3 cycles). These measurements include planar scans in the prefocal region in free field for characterisation of the source, and planar scans further from the source after propagation through 3 different bone phantoms: a parametric araldite resin phantom, a mesh based skull bone phantom obtained from a T1 weighted MRI scan of the head, cast in araldite and printed in VeroBlack. Medium maps used in simulations, which match the experimental set up are included as a supplementary file, these include speed of sound, attenuation coefficient and density. The .stl file containing the mesh is also included as a supplementary file. All measurements were acquired using an automated scanning tank filled with degassed, deionised water. The transducer was mounted in a fixed xyz position. Hydrophones were mounted on an automated xyz stage, with manual tilt, rotate adjustment. In total this study contains 5 datasets contained 5 files, the corresponding figure or table in the paper is given in brackets: 1: Free field XY planar transverse scan at z = 45 mm, corresponds to dataset 2, which was performed in the same measurement session. 2. XY planar transverse scan at z = 58 mm after propagation through a parametric araldite 1302 resin phantom. (Fig 13) 3. Free field XY planar transverse scan at 45 mm, corresponds to datasets 4 and 5, which were performed in the same measurement session. 4. Planar transverse scan at z = 85 mm after propagation through a mesh based skull bone phantom cast in araldite 1302. (Fig 14) 5. Planar transverse scan at z = 85 mm after propagation though a mesh based skull bone phantom printed in VeroBlack. (Fig 14) Supplementary files: 6. *_supplementary_01.h5, h5 file containing fields medium1, medium2 and medium3, which contain grid based medium maps (sound speed, attenuation coefficient at 1 MHz, and density), with coordinates and description, for medium1: parametric resin phantom, medium2: mesh based resin phantom, medium3: mesh based VeroBlack phantom. 7. *_supplementary-02.stl, .stl file containing mesh used to construct the anatomical bone phantom 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact This dataset has had over 100 downloads, the research paper is highly cited. 
URL https://rdr.ucl.ac.uk/articles/dataset/Sensitivity_of_simulated_transcranial_ultrasound_fields_to_ac...
 
Title Sensitivity of simulated transcranial ultrasound fields to acoustic medium property maps 
Description This data was collected in order to validate models of ultrasound propagation through skull bone phantoms. A single element spherically focusing ultrasound transducer (PA332 at 1 MHz, Precision Acoustics) was used to generate an acoustic field. Measurements were performed with a 0.2 mm PVDF needle hydrophone (Precision Acoustics) to characterise the source under short burst conditions (3 cycles). These measurements include planar scans in the prefocal region in free field for characterisation of the source, and planar scans further from the source after propagation through 3 different bone phantoms: a parametric araldite resin phantom, a mesh based skull bone phantom obtained from a T1 weighted MRI scan of the head, cast in araldite and printed in VeroBlack. Medium maps used in simulations, which match the experimental set up are included as a supplementary file, these include speed of sound, attenuation coefficient and density. The .stl file containing the mesh is also included as a supplementary file. All measurements were acquired using an automated scanning tank filled with degassed, deionised water. The transducer was mounted in a fixed xyz position. Hydrophones were mounted on an automated xyz stage, with manual tilt, rotate adjustment. In total this study contains 5 datasets contained 5 files, the corresponding figure or table in the paper is given in brackets: 1: Free field XY planar transverse scan at z = 45 mm, corresponds to dataset 2, which was performed in the same measurement session. 2. XY planar transverse scan at z = 58 mm after propagation through a parametric araldite 1302 resin phantom. (Fig 13) 3. Free field XY planar transverse scan at 45 mm, corresponds to datasets 4 and 5, which were performed in the same measurement session. 4. Planar transverse scan at z = 85 mm after propagation through a mesh based skull bone phantom cast in araldite 1302. (Fig 14) 5. Planar transverse scan at z = 85 mm after propagation though a mesh based skull bone phantom printed in VeroBlack. (Fig 14) Supplementary files: 6. *_supplementary_01.h5, h5 file containing fields medium1, medium2 and medium3, which contain grid based medium maps (sound speed, attenuation coefficient at 1 MHz, and density), with coordinates and description, for medium1: parametric resin phantom, medium2: mesh based resin phantom, medium3: mesh based VeroBlack phantom. 7. *_supplementary-02.stl, .stl file containing mesh used to construct the anatomical bone phantom 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
Impact dataset linked to from new draft international standard on measurement based modelling as a suggested benchmark 
URL https://rdr.ucl.ac.uk/articles/dataset/Sensitivity_of_simulated_transcranial_ultrasound_fields_to_ac...
 
Title Simulating Focused Ultrasound Transducers using Discrete Sources on Regular Cartesian Grids 
Description This data was collected in order to validate models of curved sources on cartesian grids. A single element spherically focusing ultrasound transducer (H101 at 1.1 MHz, Sonic Concepts) was used to generate an acoustic field. Measurements were performed with a 0.2 mm PVDF needle hydrophone (Precision Acoustics) to characterise the source under quasi continuous wave and short burst conditions. These measurements include planar scans in the prefocal region for the two driving regimes, and axial scans at the same drive level for both drive regimes. There are additional axial scans at one further higher drive level (very weakly nonlinear) for each of the driving regimes which were acquired for comparison with the model with scaled input source amplitude. All measurements were acquired using an automated scanning tank filled with degassed, deionised water. The transducers mounted in a fixed xyz position with automated tilt, rotate adjustment. Hydrophones were mounted on an automated xyz stage, with manual tilt, rotate adjustment. In total this study contains 6 datasets contained in one file, the corresponding figure or table in the paper is given in brackets: 1: Planar scan with 45 cycle burst (qCW) at z = 42.5 mm, linear field 2: Axial scan 45 cycle burst (qCW), linear field (conditions as in 1), Fig 8, 9. 3: Axial scan 45 cycle burst (qCW), weakly nonlinear field, Fig 8, 9. 4: Planar scan with 4 cycle burst at z = 42.5 mm, linear field 5: Axial scan 4 cycle burst, linear field (conditions as in 4), Fig 10, 11. 6. Axial scan 4 cycle burst, weakly nonlinear field, Fig 10, 11. 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact This dataset has had approximately 40 downloads 
URL https://rdr.ucl.ac.uk/articles/dataset/Simulating_Focused_Ultrasound_Transducers_using_Discrete_Sour...
 
Description Across Acoustics podcast 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Across Acoustics podcast episode: Measurement and simulation of steered acoustic fields generated by a multielement array for therapeutic ultrasound
I was interviewed on one of my recent journal articles, communicating the content, motivation and impact to a general audience. The podcast is available across podcast platforms.
Year(s) Of Engagement Activity 2021
URL https://acousticalsociety.org/across-acoustics-podcast/
 
Description IEC TC87 - Ultrasonics Technical Committee 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact Member of expert IEC technical committee 87 on Ultrasonics.
The scope of the Ultrasonics technical committee is to prepare standards related to the characteristics, methods of measurement, safety, and specifications of fields, equipment and systems in the domain of ultrasonics. Contribution to review, maintenance and drafting of international standards.
Year(s) Of Engagement Activity 2017,2018,2019,2020,2021,2022
URL https://www.iec.ch/technical-committees-and-subcommittees
 
Description ITRUSST expert group 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact International Transcranial Ultrasonic Stimulation Safety and Standards. We are an international consortium working together towards the safe and effective application of transcranial focused ultrasound for neuromodulation. ITRUSST aims to establish consensus on expert guides, guidelines, and standardization for this neuromodulatory technique.
Year(s) Of Engagement Activity 2020,2021,2022
URL https://itrusst.github.io