Mammalian vocal communication as a model for human language; from genes and brains to behaviour
Lead Research Organisation:
University of St Andrews
Department Name: Biology
Abstract
Our ability to communicate via spoken language requires a complex skill set built upon cognitive and physiological processes. I aim to discover the biological bases of language related skills and understand how they unite to create the sophisticated social communication system that is language. Bats present a unique opportunity to shed light on these issues because they are an extraordinary group of animals with intricate social structures and communication abilities. They feature speech and language relevant traits such as vocal learning - the ability to learn new vocalisations, a crucial component of how we learn to speak. However this potential has rarely been exploited. My goal is to use bat models to understand the biological encoding of social-vocal communication abilities. By comparing these findings with other mammals and with humans, it will be possible to shed light on mechanisms by which human language evolved.
Specifically, I will explore the behavioural abilities that bats have to learn new vocalisations in a social context, and compare this with other vocal learning mammals (e.g. seals, dolphins). I will investigate the neurobiological, genetic, and genomic factors contributing to these abilities. And I will integrate findings from human language disorder studies to identify parallels between the mechanisms that allow these social-vocal communicative behaviours in bats and other mammals, to those that underscore human language abilities and evolution.
Specifically, I will explore the behavioural abilities that bats have to learn new vocalisations in a social context, and compare this with other vocal learning mammals (e.g. seals, dolphins). I will investigate the neurobiological, genetic, and genomic factors contributing to these abilities. And I will integrate findings from human language disorder studies to identify parallels between the mechanisms that allow these social-vocal communicative behaviours in bats and other mammals, to those that underscore human language abilities and evolution.
Planned Impact
The fellowship will study vocal learning in bats, using leading-edge techniques to drive understanding of the genomics, genetics, neurobiology and behaviour of this trait. This will provide the first model for studying the neurobiology and genetics of language relevant traits in a non-human mammal. This new approach will ultimately shed light on the biological underpinnings of human speech and language and associated disorders, and resolve unanswered questions about how speech and language may have evolved.
Goal 1. Foster partnerships for knowledge exchange with industry/technology development. Beneficiaries: Industry/technology partners.
Being at the forefront of genomic sequencing with the Bat1K consortium, I will work with Industrial/technology development partners to exchange knowledge about the implementation and utilization of their rapidly developing genomic technologies. As 'super users' of these technologies, we will provide feedback throughout the fellowship about what works well and what is problematic about the technology and help them focus their improvement and development efforts to improve the technology hardware and software that is available. This has knock-on effects to accelerate technology development as well as industry and research output.
Goal 2. Engage and encourage the next generation of scientists, particularly minority and disadvantaged students. Beneficiaries: Students
Education of the next generation of scientists, as well as promoting equality in science is a high priority. These activities engage with student education and actively encourage students from minorities or less advantaged backgrounds to interact with ongoing research and understand the reality of being a scientist. Giving hands on experience with scientific research can demystify science as a higher education option or career path, therefore increasing opportunities for minority or disadvantaged students to succeed.
Goal 3. Increase the public understanding of science, promote conservation of bats, and involve patient groups. Beneficiaries: Charitable partners, museums, general public, students, patient groups.
Bats are fascinating creatures with special skills such as being able to 'see in the dark' via echolocation, living to extraordinarily old ages, and avoiding otherwise deadly diseases like ebola. Furthermore, bats are vital to our ecosystems and crops as they pollinate plants, disperse seeds and consume harmful insect pests. The goal will be to work with museums, galleries and local artists to generate exhibitions and installations that engage different audiences to learn about bats. By working with charitable partners such as bat conservation charities, local artists, students and patient groups (children with speech/language disorders, autism, etc., given bats relevance for human language, and blindness given their ability to navigate via sound) we will facilitate community driven exhibitions and installations. These activities will benefit the general public and students by teaching them about the special features of bats and their protection, and will benefit UK agriculture and ecosystems by encouraging bat conservation. They will benefit patient groups by finding new ways to engage patients and families. These exhibitions will also benefit museums, local artists and conservation organisations by bringing new audiences to them.
In addition to these activities, we will actively engage with conservation groups to help them make use of the genomic resources we generate for conservation efforts, and with the media to promote our work and bats via print, web, radio and television.
Goal 1. Foster partnerships for knowledge exchange with industry/technology development. Beneficiaries: Industry/technology partners.
Being at the forefront of genomic sequencing with the Bat1K consortium, I will work with Industrial/technology development partners to exchange knowledge about the implementation and utilization of their rapidly developing genomic technologies. As 'super users' of these technologies, we will provide feedback throughout the fellowship about what works well and what is problematic about the technology and help them focus their improvement and development efforts to improve the technology hardware and software that is available. This has knock-on effects to accelerate technology development as well as industry and research output.
Goal 2. Engage and encourage the next generation of scientists, particularly minority and disadvantaged students. Beneficiaries: Students
Education of the next generation of scientists, as well as promoting equality in science is a high priority. These activities engage with student education and actively encourage students from minorities or less advantaged backgrounds to interact with ongoing research and understand the reality of being a scientist. Giving hands on experience with scientific research can demystify science as a higher education option or career path, therefore increasing opportunities for minority or disadvantaged students to succeed.
Goal 3. Increase the public understanding of science, promote conservation of bats, and involve patient groups. Beneficiaries: Charitable partners, museums, general public, students, patient groups.
Bats are fascinating creatures with special skills such as being able to 'see in the dark' via echolocation, living to extraordinarily old ages, and avoiding otherwise deadly diseases like ebola. Furthermore, bats are vital to our ecosystems and crops as they pollinate plants, disperse seeds and consume harmful insect pests. The goal will be to work with museums, galleries and local artists to generate exhibitions and installations that engage different audiences to learn about bats. By working with charitable partners such as bat conservation charities, local artists, students and patient groups (children with speech/language disorders, autism, etc., given bats relevance for human language, and blindness given their ability to navigate via sound) we will facilitate community driven exhibitions and installations. These activities will benefit the general public and students by teaching them about the special features of bats and their protection, and will benefit UK agriculture and ecosystems by encouraging bat conservation. They will benefit patient groups by finding new ways to engage patients and families. These exhibitions will also benefit museums, local artists and conservation organisations by bringing new audiences to them.
In addition to these activities, we will actively engage with conservation groups to help them make use of the genomic resources we generate for conservation efforts, and with the media to promote our work and bats via print, web, radio and television.
Organisations
- University of St Andrews (Collaboration, Lead Research Organisation)
- University of Arizona (Collaboration)
- Leiden University (Collaboration)
- Rockefeller University (Collaboration)
- Stony Brook University (Collaboration)
- Max Planck Society (Collaboration)
- University of North Carolina at Charlotte (Collaboration)
- University College Dublin (Collaboration)
- The Wellcome Trust Sanger Institute (Collaboration)
- Tel Aviv University (Collaboration)
- University of Dundee (Collaboration)
- Queen Mary University of London (Collaboration)
- Technologiezentrum Dresden (Collaboration)
- Texas Tech University (Collaboration)
- Massachusetts Institute of Technology (Collaboration)
- University of Texas Southwestern Medical Center (Collaboration)
- Technical University Dresden (Project Partner)
- Max Planck Institutes (Project Partner)
- Catholic (Radboud) University Foundation (Project Partner)
- Ludwig-Maximilians-Universität München (Project Partner)
People |
ORCID iD |
| Sonja Vernes (Principal Investigator / Fellow) |
Publications
Alvarez Van Tussenbroek I
(2024)
The genome sequence of Rhynchonycteris naso, Peters, 1867 (Chiroptera, Emballonuridae, Rhynchonycteris).
in Wellcome open research
Anijs M
(2022)
ARHGEF39, a Gene Implicated in Developmental Language Disorder, Activates RHOA and Is Involved in Cell De-Adhesion and Neural Progenitor Cell Proliferation.
in Frontiers in molecular neuroscience
D'Onofrio G
(2023)
Genotype-phenotype correlation in contactin-associated protein-like 2 (CNTNAP-2) developmental disorder.
in Human genetics
Haghani A
(2021)
DNA Methylation Networks Underlying Mammalian Traits
Hoeksema N
(2021)
Neuroanatomy of the grey seal brain: bringing pinnipeds into the neurobiological study of vocal learning.
in Philosophical transactions of the Royal Society of London. Series B, Biological sciences
Lattenkamp E
(2021)
The vocal development of the pale spear-nosed bat is dependent on auditory feedback
in Philosophical Transactions of the Royal Society B: Biological Sciences
Lim B
(2024)
The genome sequence of the greater two-lined sac-winged bat Saccopteryx bilineata, Temminck, 1838 (Emballonuridae, Emballonurinae)
in Wellcome Open Research
Lu AT
(2023)
Universal DNA methylation age across mammalian tissues.
in Nature aging
Millar A
(2024)
The genome sequence of the Brown Long-eared bat, Plecotus auritus (Linnaeus 1758)
in Wellcome Open Research
Morales AE
(2025)
Bat genomes illuminate adaptations to viral tolerance and disease resistance.
in Nature
| Description | In the past year we have been able to sequence the genomes of multiple vocal learning relevant bat species and produce transcriptomic data to profile the expression of genes across these bats. This data will be released to the public for use in understanding vocal learning in bats, as well as a range of other specialised phenotypes associated with bats. We have also been able to develop the first transgenic bats and are making progress on understanding the underlying genetic components of vocal learning. We have not been able to make as much progress as initially planned due to delays and interruptions caused by COVID, but are in a much better position to make progress given the measures we put in place this year to ameliorate these delays. |
| Exploitation Route | Our genomic and transcriptomic data generated is being publicly released so that it may be used across multiple research areas. |
| Sectors | Environment Pharmaceuticals and Medical Biotechnology |
| Description | ESEB Outreach Initiative Fund |
| Amount | € 3,500 (EUR) |
| Organisation | European Society for Evolutionary Biology |
| Sector | Learned Society |
| Country | Germany |
| Start | 04/2024 |
| End | 05/2025 |
| Description | St Leonard's College - Travel Award (3x PhD student awards) |
| Amount | £750 (GBP) |
| Organisation | University of St Andrews |
| Sector | Academic/University |
| Country | United Kingdom |
| Start | 01/2025 |
| End | 01/2026 |
| Title | The pale spear-nosed bat: A neuromolecular and transgenic model for vocal learning |
| Description | Vocal learning, the ability to produce modified vocalizations via learning from acoustic signals, is a key trait in the evolution of speech. While extensively studied in songbirds, mammalian models for vocal learning are rare. Bats present a promising study system given their gregarious natures, small size, and the ability of some species to be maintained in captive colonies. We utilize the pale spear-nosed bat (Phyllostomus discolor) and report advances in establishing this species as a tractable model for understanding vocal learning. We have taken an interdisciplinary approach, aiming to provide an integrated understanding across genomics (Part I), neurobiology (Part II), and transgenics (Part III). In Part I, we generated new, high-quality genome annotations of coding genes and noncoding microRNAs to facilitate functional and evolutionary studies. In Part II, we traced connections between auditory-related brain regions and reported neuroimaging to explore the structure of the brain and gene expression patterns to highlight brain regions. In Part III, we created the first successful transgenic bats by manipulating the expression of FoxP2, a speech-related gene. These interdisciplinary approaches are facilitating a mechanistic and evolutionary understanding of mammalian vocal learning and can also contribute to other areas of investigation that utilize P. discolor or bats as study species. |
| Type Of Material | Model of mechanisms or symptoms - mammalian in vivo |
| Year Produced | 2022 |
| Provided To Others? | Yes |
| Impact | Further scientific projects have arisen based on this work |
| URL | https://pubmed.ncbi.nlm.nih.gov/36069117/ |
| Title | Bat genome sequences - Wellcome Open Research |
| Description | Genome sequences of the following bats; Whiskered bat, Myotis mystacinus (https://wellcomeopenresearch.org/articles/9-684/v1) Particolored bat, Vespertilio murinus Linnaeus (https://wellcomeopenresearch.org/articles/9-403/v1) Greater two-lined sac-winged bat Saccopteryx bilineata (https://wellcomeopenresearch.org/articles/9-726/v1) Brown Long-eared bat, Plecotus auritus (https://wellcomeopenresearch.org/articles/9-246/v1) Tadarida brasiliensis (https://wellcomeopenresearch.org/articles/9-98/v1) Rhynchonycteris naso (https://wellcomeopenresearch.org/articles/9-361/v1) Molossus alvarezi González-Ruiz, Ramírez-Pulido and Arroyo-Cabrales (https://wellcomeopenresearch.org/articles/9-522/v1) Daubenton's bat, Myotis daubentonii (https://wellcomeopenresearch.org/articles/9-107/v1) Soprano Pipistrelle, Pipistrellus pygmaeus (https://wellcomeopenresearch.org/articles/8-360/v1) Northern bat, Eptesicus nilssonii (https://wellcomeopenresearch.org/articles/8-362/v1) Molossus nigricans (Chiroptera, Molossidae) (https://wellcomeopenresearch.org/articles/8-198/v1) |
| Type Of Material | Database/Collection of data |
| Year Produced | 2024 |
| Provided To Others? | Yes |
| Impact | Published genomes |
| Title | Chiropterans Are a Hotspot for Horizontal Transfer of DNA Transposons in Mammalia |
| Description | Paper publication (DOI: https://doi.org/10.1093/molbev/msad092) All assemblies are available on GenBank (see supplementary table S1 , Supplementary material online for accession numbers). TE consensus sequences, and their seed alignments, are available via the Dfam database. All other data is available in the supplementary materials, Supplementary Material online; code used in the analysis is available at github.com/daray/bat_ht. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2023 |
| Provided To Others? | Yes |
| Impact | Paper publication |
| Title | DNA methylation predicts age and provides insight into exceptional longevity of bats |
| Description | Paper publication data (DOI: https://doi.org/10.1038/s41467-021-21900-2) All data used in this study are freely available. Normalized methylation values for each sample, along with sample metadata, are available from NCBI GEO as series GSE164127 (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE164127). The design of the Illumina microarray (HorvathMammalMethylChip40) is available from the Gene Expression Omnibus (GEO) at NCBI as platform GPL28271 (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL28271). Microarray probe annotations for ten bat genomes are available from the Digital Repository at the University of Maryland (DRUM) at http://hdl.handle.net/1903/26373. Coefficients from the penalized regressions used to estimate bat age for different taxonomic groups are available at https://doi.org/10.6084/m9.figshare.c.5257271. Transcription factor databases used in this study are available as follows: TRANSFAC (http://gene-regulation.com/pub/databases.html), UniPROBE (http://thebrain.bwh.harvard.edu/uniprobe/), HT-Selex (https://ccg.epfl.ch/htpselex/) and JASPAR (http://jaspar.genereg.net/downloads/). Source data for figures are provided with this paper. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2021 |
| Provided To Others? | Yes |
| Impact | Paper publication |
| Title | Data for "Learning how to call: the vocal development of the pale spear-nosed bat is dependent on auditory feedback" |
| Description | Acoustic call parameters, auditory brainstem responses, and data analysis programs for Lattenkamp et al., "Learning how to call: the vocal development of the pale spear-nosed bat is dependent on auditory feedback". |
| Type Of Material | Database/Collection of data |
| Year Produced | 2020 |
| Provided To Others? | Yes |
| Impact | Acoustic parameters of P. discolor vocalisations, auditory brainstem responses, and data analysis programs for Lattenkamp et al., 2021. |
| URL | https://doi.gin.g-node.org/10.12751/g-node.lrqd92 |
| Title | Large-scale genome sampling reveals unique immunity and metabolic adaptations in bats |
| Description | Comprising more than 1,400 species, bats possess adaptations unique among mammals including powered flight, unexpected longevity given small body size, and extraordinary immunity. Some of the molecular mechanisms underlying these unique adaptations includes DNA repair, metabolism and immunity. However, analyses have been limited to a few divergent lineages, reducing the scope of inferences on gene family evolution across the Order Chiroptera. We conducted an exhaustive comparative genomic study of 37 bat species encompassing a large number of lineages, with a particular emphasis on multi-gene family evolution across immune system and metabolic genes. Genomes were obtained from public repositories and one genome (Phyllostomus hastatus) was assembled de novo. In agreement with previous analyses, we found lineage-specific expansions of the APOBEC3 and MHC-I gene families, and loss of the proinflammatory PYHIN gene family. We inferred more than 1,000 gene losses unique to bats, including genes involved in the regulation of inflammasome pathways such as epithelial defense receptors, the natural killer gene complex and the interferon-gamma induced pathway. Gene set enrichment analyses revealed genes lost in bats are involved in defense response against pathogen-associated molecular patterns and damage-associated molecular patterns. Gene family evolution and selection analyses indicate bats have evolved fundamental functional differences compared to other mammals in both innate and adaptive immune system, with the potential to enhance anti-viral immune response while dampening inflammatory signaling. In addition, metabolic genes have experienced repeated expansions related to convergent shifts to plant-based diets. Our analyses support the hypothesis that, in tandem with flight, ancestral bats had evolved a unique set of immune adaptations whose functional implications remain to be explored. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2021 |
| Provided To Others? | Yes |
| Impact | This repository contains the scripts used to generate data for the article "Large-scale genome sampling reveals unique immunity and metabolic adaptations in bats" from Molecular Ecology. These include the commands used for the assembly of genomes and transcriptomes, the construction of an ultrametric phylogenetic tree with the MCMCtree bioinformatics tool, the scripts used to run selection analysis with CODEML as well as the files used to perform gene family evolution analysis with CAFE. The dataset has been viewed 69 times, downloaded 16 times and cited by 1 research article. |
| URL | http://datadryad.org/stash/dataset/doi:10.5061/dryad.59zw3r265 |
| Title | Large-scale genome sampling reveals unique immunity and metabolic adaptations in bats |
| Description | Paper publication data (DOI: https://doi.org/10.1111/mec.16027) Final genome assembly has been desposited at Genbank under BioProjectID: PRJNA733208 and accession number JAHKBD000000000. Scripts for genome assembly, ultrametric tree construction, gene family, and selection test have been deposited in Dryad repository https://doi.org/10.5061/dryad.59zw3r265. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2021 |
| Provided To Others? | Yes |
| Impact | Paper publication |
| Title | Neuroanatomy of the grey seal brain: bringing pinnipeds into the neurobiological study of vocal learning |
| Description | Data for paper (DOI: https://doi.org/10.1098/rstb.2020.0252) The unlabelled brain template can be found here: https://osf.io/hz3gc/. The labelled brain template can be found here: https://osf.io/xq9pb/. Corresponding legends and labels can be downloaded from here: https://osf.io/4urbe/. All raw MRI data can be found here: https://osf.io/62ebs/. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2021 |
| Provided To Others? | Yes |
| Impact | Paper publication. |
| Description | Bat Biology Foundation |
| Organisation | University of St Andrews |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Founding director |
| Collaborator Contribution | Global partnership with wide ranging expertise in bat biology. Contributing to all work packages and key for implementation of work package 5 (UK Bat Hub) |
| Impact | Publications, conferences, workshops, as listed elsewhere |
| Start Year | 2022 |
| Description | Bat1K Consortium |
| Organisation | University College Dublin |
| Country | Ireland |
| Sector | Academic/University |
| PI Contribution | I am the founding co-director of the global Bat1K consortium which has the goal to sequence the genomes of all living bat species |
| Collaborator Contribution | We are a consortium of >450 members worldwide who collaborate on genome sequencing, fieldwork and scientific endeavours |
| Impact | A number of scientific papers have been published from this collaboration, as listed in the paper outputs section |
| Start Year | 2016 |
| Description | Carel ten Cate |
| Organisation | Leiden University |
| Country | Netherlands |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration, and expertise in neurobiological properties of vocal learning, including structural neuroimaging |
| Collaborator Contribution | Discussion, collaboration, and expertise in neurobiological properties of vocal learning with a focus on birds - work package 3 Supervision of PhD student |
| Impact | Publications as listed elsewhere PhD thesis |
| Start Year | 2020 |
| Description | Dresden-Concept Genome Centre (DCGC) |
| Organisation | Technologiezentrum Dresden |
| Country | Germany |
| Sector | Private |
| PI Contribution | Tissues and other samples have been sent for sequencing |
| Collaborator Contribution | Sequencing and bioinformatics performed by DCGC. |
| Impact | Sequencing, genome datasets as listed in publications section. |
| Start Year | 2020 |
| Description | Erich Jarvis |
| Organisation | Rockefeller University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration and expertise in genomics and molecular biology in vocal learning. Co-chair of Vertebrate Genomes Project. |
| Collaborator Contribution | Discussion, collaboration and expertise in genomics and molecular biology in vocal learning. Co-chair of Vertebrate Genomes Project. |
| Impact | Publications as listed elsewhere |
| Start Year | 2020 |
| Description | Gene Myers |
| Organisation | Max Planck Society |
| Department | Max Planck Institute for Molecular Cell Biology and Genetics |
| Country | Germany |
| Sector | Academic/University |
| PI Contribution | Tissue/samples for sequencing |
| Collaborator Contribution | Sequencing datasets and interpretation, in consortium with DCGC |
| Impact | Sequencing datasets |
| Start Year | 2020 |
| Description | Genevieve Konopka |
| Organisation | University of Texas Southwestern Medical Center |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration, and expertise in molecular biology, neurobiology, and comparative genomics. Tissue/samples for sequencing. |
| Collaborator Contribution | Discussion, collaboration, and expertise in molecular biology, neurobiology, and comparative genomics - work packages 3 and 4 |
| Impact | Publications as listed elsewhere |
| Start Year | 2020 |
| Description | Graham Hughes |
| Organisation | University College Dublin |
| Country | Ireland |
| Sector | Academic/University |
| PI Contribution | Sequencing of tissue and datasets provided |
| Collaborator Contribution | Bioinformatic analyses and grant writing |
| Impact | Grant application submissions, bioinformatic analyses in published articles, MRes/PhD supervision |
| Start Year | 2020 |
| Description | Laurel Yohe |
| Organisation | University of North Carolina at Charlotte |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration, and expertise in genomics and molecular biology underlying vocal learning |
| Collaborator Contribution | Discussion, collaboration, and expertise in genomics and molecular biology underlying vocal learning - centred around work package 2 |
| Impact | Publications as listed elsewhere. |
| Start Year | 2020 |
| Description | M. Elise Lauterbur |
| Organisation | University of Arizona |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration, and expertise concerning genomic signatures and molecular factors underlying vocal learning |
| Collaborator Contribution | Discussion, collaboration, and expertise concerning genomic signatures and molecular factors underlying vocal learning |
| Impact | Publications as listed in other sections |
| Start Year | 2020 |
| Description | Paratus Sciences |
| Organisation | Massachusetts Institute of Technology |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration, and expertise in bat biology |
| Collaborator Contribution | Discussion, collaboration, and expertise in bat biology - global network across all work packages. Using evolutionary adaptations of bats to accelerate development of therapies for human disease. |
| Impact | Publications, conferences, workshops as listed elsewhere |
| Start Year | 2020 |
| Description | Peter Hagoort |
| Organisation | Max Planck Society |
| Department | Max Planck Institute for Psycholinguistics |
| Country | Germany |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration, and expertise in neurobiological properties of vocal learning |
| Collaborator Contribution | Discussion, collaboration, and expertise in neuroimaging (PET, fMRI, DTI etc) - work package 3 |
| Impact | Publications as listed elsewhere |
| Start Year | 2020 |
| Description | Peter Thorpe |
| Organisation | University of Dundee |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration, and expertise in evolutionary genomics |
| Collaborator Contribution | Discussion, collaboration, and expertise in bioinformatics |
| Impact | Publications listed elsewhere |
| Start Year | 2020 |
| Description | Stephen Rossiter |
| Organisation | Queen Mary University of London |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration, and expertise in genomics.molecular biology underlying vocal learning |
| Collaborator Contribution | Discussion, collaboration, and expertise in molecular ecology and evolution - work package 2 |
| Impact | Publications as listed elsewhere |
| Start Year | 2020 |
| Description | Tanya Lama |
| Organisation | Stony Brook University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Discussions/collaboration surrounding conservation and evolutionary genomics |
| Collaborator Contribution | Discussions/collaboration surrounding conservation and evolutionary genomics |
| Impact | Publications/grant applications as listed in other sections |
| Start Year | 2020 |
| Description | The Global Union of Bat Diversity Networks (GBatNet) |
| Organisation | Texas Tech University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration, expertise in bat biology |
| Collaborator Contribution | Discussion, collaboration, expertise in bat biology - global network of collaborators contribution to all work packages. Essential for work package 5 - development of UK Bat Hub |
| Impact | Publications, conferences, workshops as listed elsewhere |
| Start Year | 2020 |
| Description | Vertebrate Genomes Project |
| Organisation | The Wellcome Trust Sanger Institute |
| Country | United Kingdom |
| Sector | Charity/Non Profit |
| PI Contribution | Co-chair of 'Vertebrate Genome Project (VGP)-vocal learning and language working group, driving genome sequencing of vocal learning and non-learning species and comparative evolutionary analyses. |
| Collaborator Contribution | Sequencing and bioinformatic analyses of vocal learning and non-learning species and comparative evolutionary analyses. |
| Impact | Published sequencing datasets |
| Start Year | 2020 |
| Description | Vincent Janik |
| Organisation | University of St Andrews |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration, and expertise in behavioural assays assessing vocal learning behaviour in bats |
| Collaborator Contribution | Discussion, collaboration, and expertise in behavioural assays assessing vocal learning behaviour in marine mammals - Work package 4 |
| Impact | Publications as listed elsewhere PhD studentship co-supervision |
| Start Year | 2020 |
| Description | Yossi Yovel |
| Organisation | Tel Aviv University |
| Country | Israel |
| Sector | Academic/University |
| PI Contribution | Discussion, collaboration and expertise in neurobiological properties of vocal learning |
| Collaborator Contribution | Discussion, collaboration and expertise neurobiology and NeuroEcology of fundamental behaviours of bats - work package 3 |
| Impact | Publications as listed elsewhere |
| Start Year | 2020 |
| Description | Zixia Huang |
| Organisation | University College Dublin |
| Country | Ireland |
| Sector | Academic/University |
| PI Contribution | Discussion/collaboration surrounding evolutionary biology, bioinformatics, functional genomics. |
| Collaborator Contribution | Discussion/collaboration surrounding evolutionary biology, bioinformatics, functional genomics. |
| Impact | Sequencing datasets, bioinformatic analyses, grant applications. |
| Start Year | 2020 |
| Description | Bat walks |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | Bat walks are carried out semi-regularly (~2 times per semester) with local University students and the general public. This is a walk around a local area using heterodynes to listen for wild bat calls. Whilst on this activity, group members speak about the lab research being carried out, in order to generate wider impact and awareness of our research and potentially set up student internships throughout the year. This activity has ~30 attendees per session, totalling over 100 attendees as of 2024. |
| Year(s) Of Engagement Activity | 2024 |
| Description | Dundee Science Festival |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | The Dundee Science Centre exhibition was aimed at primary school children aged 5-12 . The contents of the exhibition include introducing the types of bats and their favourite food, playing the calls of bats, showing how to identify bats with electronic chips and scanners, teaching audience to pipette and letting them observe brain slices under a microscope. This exhibition has many interactive parts for participants, which attracted a lot of visitors (estimated to be ~300) in these two days. |
| Year(s) Of Engagement Activity | 2024 |
| Description | First Chances Fife |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | This workshop was developed for High School students across Fife (Scotland) aged 11-13. 4 consecutive work stations were ran, introducing secondary students to a range of biological topics using bats as an example. Activities included basic lab techniques (pipetting, gel electrophoresis), microscopy, neurobiology, bat care and PPE, bat behaviour experiments. This workshop reached ~120 students across different schools in Fife. |
| Year(s) Of Engagement Activity | 2024 |
| Description | Girl Guides - Women in STEM |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | The exhibition at the Dundee Science Centre was aimed at young children (5-12 years) who are members of the Girl Guides. This workshop was run by women in sciences across multiple disciplines to inspire Girl Guides to pursue STEM activities and careers. The contents of the exhibition include introducing the types of bats and their favorite food, playing the calls of bats, showing how to identify bats with electronic tags and scanners, teaching audience to pipette and letting them observe brain slices under a microscope. This exhibition had many interactive parts for participants, which attracted a lot of visitors, estimated to be around 150 children. |
| Year(s) Of Engagement Activity | 2024 |
| Description | Mind & Matter Discovery Day |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | We were one of over 50 groups presenting family-friendly activities related to research at the University of St. Andrews and the greater Fife area; we used a variety of small activities to talk about bats and the type of work we do with them. Activities included echolocating bat goggles, microscopy, pipetting, and animal care/PPE. This event had ~300 attendees. |
| Year(s) Of Engagement Activity | 2024 |
| Description | Neurogenetics of Vocal Communication - Website |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | We host a website for our lab which describes our research, engagement activities, publications, grants, events, lab members and available positions. This website is freely available and has been used by external members to contact the lab for engagement activities. |
| Year(s) Of Engagement Activity | 2018,2019,2020,2021,2022,2023,2024,2025 |
| URL | https://verneslab.wordpress.com/ |
| Description | STV news - Viral tolerance in bats, Nature paper |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | STV News visited the lab and held a short interview discussing a recent paper published in nature. This paper involved our lab and the Bat1K consortium and was titled; Bat genomes illuminate adaptations to viral tolerance and disease resistance. This interview was posted by STV News which has an average audience of ~380,000 people. |
| Year(s) Of Engagement Activity | 2024 |
| URL | https://news.stv.tv/north/st-andrews-university-research-finds-bats-can-tolerate-coronaviruses-witho... |
| Description | Sutton Trust Summer School |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | The Sutton Trust Summer School targets late High School Students ~15-16 years old from underprivileged backgrounds. This 1.5 hour workshop introduced these students to university-level biology, in an effort to encourage them to pursue careers at university. The workshop contained several activities including microscopy, neurobiology, animal care, ecology, conservation, and behaviour. This activity reach ~40 students and had excellent feedback from attendees. |
| Year(s) Of Engagement Activity | 2024 |