PHOTORECEPTOR OPTIMISATION OF PLANT WATER USE

Lead Research Organisation: University of Sheffield
Department Name: Molecular Biology and Biotechnology

Abstract

A changing climate coupled with increasing population and resource use is placing a greater strain on our ability to feed the world community. Crop productivity is dependent on water availability and predicted reductions in this resource could seriously impact our Food Security. We therefore need to develop crops with improved photosynthetic performance and reduced water use. A plants performance is determined by its ability to respond to environmental signals. Light is one of the most important signals for regulating plant growth and development. It is required not only for photosynthesis but also various other processes including seed germination, stem elongation and leaf development. Transforming a light signal (direction, quality and quantity) into a response is the role of plant photoreceptors and phytochrome B, a red/far-red photoreceptor, plays a major role in many of these responses. This includes balancing photosynthetic performance with the amount of water a plant uses. Plants defective in phyB, show a trade-off with significant improvements in their water use at the expense of reductions in their photosynthetic performance. Our work has shown that phyB regulates the development of stomata on the leaf surface. Stomata are the small pores found on the surface of leaves and they are critical regulators of plant gas exchange, balancing the uptake of carbon dioxide gas, which is required for photosynthesis, in exchange for water vapour. phyB signalling determines the number of stomata that develop on a leaf, which has a direct impact on plant water use and photosynthesis. A major outcome of this proposal will be to establish the role of a phyB signalling network in regulating this process through both tissue specific and inter-tissue signalling. Modulating this phyB signalling network presents a means of manipulating the trade-off between water use and photosynthesis to generate plants with improved performance.

Technical Summary

Light has a major impact on plant growth and development regulating processes such as seed germination, stem elongation, leaf morphogenesis and development, including stomatal development. We have demonstrated that the red/far-red light photoreceptor, phytochrome B has a dominant role regulating stomatal development. Stomata are major regulators of plant water use and productivity and understanding their development is crucial to ensure our Food Security in a changing environment. phyB mutants not only show defects in stomatal development, but also significant improvements in water use, at the expense of net carbon assimilation. With new data, we propose a model that links signalling events in the epidermis with those in the mesophyll to determine stomatal development. The proposed network enables plants to discriminate impulsive light signals of short duration from more sustained light signals and prevents premature stomatal development. phyB is pivotal to this inter-tissue network and ensures that that plants efficiently conserve water in a changing light environment. To interrogate this model and provide novel mechanistic insights into how light signalling regulates plant water use we have three aims. To establish the role of phyB in regulating components of the network in both the epidermis and photosynthetic mesophyll tissues. We will then interrogate key components of the network to elucidate the mechanism by which light regulates stomatal development in the epidermis. Finally, we will use physiologically methods to determine whether manipulation of this pathway can uncouple the trade-off between water use and carbon assimilation in phyB mutants.

Planned Impact

Who will benefit from this research?
This project is aimed at understanding the mechanism that regulate plant water use in response to light signals. The academic community will benefit through improved understanding of this research and this is discussed elsewhere in this proposal. The major beneficiaries outside of academia will primarily be staff employed on the project, business and industry, the farming community along with the general public and potentially the environment.

How might they benefit from this research?
The aims of this work is to understand how light signals balance plant water use and photosynthetic performance. This has the potential to lead to future translational research by altering water use in economically important plant species, with translation into wheat already initiated. A significant proportion of the UKs outdoor crops are rainfed (>90%) however, UK agriculture still uses over 130 Million tons of water annually for spray irrigation of plants. Seasonal water availability is predicted to be reduced across the UK over this century according to government reports (DEFRA, 2009). This will place a greater demand on UK water supplies and hence impact on UK business and industry in general. Therefore, the identification of genes and mechanisms that influence water use and productivity in commercial grain and bioenergy crops such as wheat, barley, miscanthus or coppiced willow will accelerate the generation of crops designed for improved performance in future environments. Such information will be valued by Agritech and Bioenergy companies as well as crop breeders who can generate new crop varieties through either enhanced breeding programs based on gene sequence data or through genetic modification (dependent on policy and demand). This in turn may impact on the UK Food and Drink Industry as, for example brewing and bread-making are reliant on grain-crops and by improving water use of such crops there is the potential benefit of ensuring sustainable future supplies of these grains, mitigating losses due to climate change (improved Food Security). As end users, farmers may potentially benefit from the development of such crop varieties at several levels with reduced costs associated with payments to water companies, abstraction of water from rivers and boreholes and construction of on farm reservoirs. This work also focuses on stomatal development and there is a growing body of research indicating that stomata have a key role to play in regulating plant-pathogen interactions. Reductions in stomatal number may therefore improve tolerance to a variety of pathogens which will be of major interest to the aforementioned groups. Engagement with these various groups will be achieved through displays at the Oxford Farming Conference, an event attended by industry, policy makers, farmers and academics and offers a means of meeting these potential beneficiaries and highlighting the research and its potential impact. Project Sunshine, the Plant Production and Protection (P3) project and the Grantham Centre for Sustainable Futures in Sheffield will also facilitate interaction with industry and policymakers through open days and networking events. The staff employed on this project will benefit from an excellent training environment and these skills will then be of significant value to both the academic and commercial sector. The public can recognise the link between light and photosynthesis and will therefore appreciate that plants have systems for differentiating between different light signals and altering their growth and development to maximise their performance. We will therefore utilise displays and talks during events such as the Sheffield Festival of Science and Engineering and University Open days to engage the wider public and highlight the significance of plant water use and food security.
 
Description 1) Components of the stomatal developmental pathway appear to be targets for machinery that breaks down proteins in the dark. So, key regulatory proteins that determine whether stomata will be formed, can be broken down by these components in darkness or low light.
2) The tissue (epidermis or photosynthetic tissue) where light is perceived has an impact on the dynamics of genes expression in the epidermis. Here we have focused both on genes associated with stomatal development, most of which are expressed in the epidermis as well as taking a global analysis. If a major light receptor, phytochrome B, is expressed in the epidermis or inner mesophyll cells of the leaf, then the stomatal genes behave differently when plants are exposed to a change in the light conditions. So, in a normal plant, this means that these two patterns must be integrated to give a 'normal' response. On a global level, expression of phyB in the epidermis results in a more WT lelvel response than expression within the mesophyll and implies that the epidermis is a major regulator of light responses.
3) Signals from the chloroplast regulate stomatal development. Other than the major light receptors, such as phytochromes and cryptochromes, we now have strong evidence that light signals also result in changes in signals from chloroplasts that then alter the expression of key regulators of stomatal development. This provides a key link between the photosynthetic machinery of the plant (the chloroplast) and the pores that allow CO2 into the plant for photosynthesis (stomata).
4) One key hypothesis of the award was that it was proposed that HY5, a key transcription factor in light signalling, would have a role in regulating the expression of key stomatal genes. However, our analysis, published in 2020 (Zoulias et al. 2020), did not support this hypothesis.
Exploitation Route We are currently preparing two manuscripts for publication, which will bring our research to the wider academic audience and we will promote these via the UoS media team upon acceptance and release.
Sectors Agriculture

Food and Drink

Environment

 
Description Improving water use and accelerating breeding pipelines in Mexican avocado
Amount £541,029 (GBP)
Funding ID BB/S012850/1 
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 02/2019 
End 12/2022
 
Title Research tools 
Description Transgenic Arabidopsis seed lines (and initial binary plasmids). Seed lines will be deposited with the Nottingham Arabidopsis Stock Centre upon completion of the project. Estradiol inducible lines. These are for the inducible overexpression of the mentioned genes following the application of estradiol: Inducible SPEECHLESS Inducible MUTE Inducible FAMA Inducible constitutively active YODA Inducible STOMAGEN Inducible HY5 Inducible HYH Inducible PAR1 Inducible ABI4 
Type Of Material Biological samples 
Provided To Others? No  
Impact The inducible SPCH line has led us to identify a new mechanism regulating entry into the stomatal lineage. 
 
Description Poster at New Phytologist Next Generation Scientist meeting July 2017 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Mechanistic insights into light regulations of stomatal development. Presented by Dr Nick Zoulias
Year(s) Of Engagement Activity 2017
 
Description Poster at New Phytologist Next Generation Scientist meeting July 2017 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact The regulation of stomatal development in Arabidopsis thaliana presented by Dr James Rowe
Year(s) Of Engagement Activity 2017
 
Description SEB Conference (Brighton) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact A presentation to the General Plant Biology session at the annual Society of Experimental Biology conference at Brighton, on the 4/7/16. The audience included international scientists and post-graduate students as well as industry and media.
Year(s) Of Engagement Activity 2016
URL http://www.sebiology.org/events/meetings_archive/SEB_Brighton_2016
 
Description Seminar James Hutton/University of Dundee 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Postgraduate students
Results and Impact A seminar on research related to plant water use delivered to members of the James Hutton Institute.
Year(s) Of Engagement Activity 2017
 
Description UKPlantSciPresents webinar 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact This was a webinar organised by UKPlantSciPresents and was open to International members of the plant research community. The webinar format was to enable continued involvement in scientific engagement under the restrictions of covid, given that all conferences and external seminars were cancelled. The audience on the day was approximately 100 but this was recorded for non-attendees to view when convenient.
Year(s) Of Engagement Activity 2021
URL https://www.youtube.com/channel/UC89b0H0Mvu5SRbgFNhf2rfQ
 
Description University Open day participation 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Open days with ~50-100 prospective students attending
Year(s) Of Engagement Activity 2017