Closed-Loop Data Science for Complex, Computationally- and Data-Intensive Analytics
Lead Research Organisation:
University of Glasgow
Department Name: School of Computing Science
Abstract
Progress in sensing, computational power, storage and analytic tools has given us access to enormous amounts of complex data, which can inform us of better ways to manage our cities, run our companies or develop new medicines. However, the 'elephant in the room' is that when we act on that data we change the world, potentially invalidating the older data. Similarly, when monitoring living cities or companies, we are not able to run clean experiments on them - we get data which is affected by the way they are run today, which limits our ability to model these complex systems. We need ways to run ongoing experiments on such complex systems.
We also need to support human interactions with large and complex data sets. In this project we will look at the overlap between the challenge someone faces when coping with all the choices associated with booking a flight for a weekend away, and an expert running complex experiments in a laboratory.
The project will test the core ideas in a number of areas, including personalisation of hearing aids, analysis of cancer data, and adapting the computing resources for a major bank.
We also need to support human interactions with large and complex data sets. In this project we will look at the overlap between the challenge someone faces when coping with all the choices associated with booking a flight for a weekend away, and an expert running complex experiments in a laboratory.
The project will test the core ideas in a number of areas, including personalisation of hearing aids, analysis of cancer data, and adapting the computing resources for a major bank.
Planned Impact
To catalyse a long term culture change and build skills capacity in Data Science, the School is planning to co-locate up to 30 J.P. Morgan staff and the Glasgow Hub of The DataLab in the same building as the academics with an Innovation Hub building in construction. Further data providers are Glasgow Polyomics, the Urban Big Data Centre and Skyscanner. The long term legacy in data science will be achieved through changing practice together with data owners, but also by sharing the tools developed in open-source resources that can be developed by others.
Closed-loop data science is a new, challenging topic which will take time for both researchers and end-users to grasp. This project will be closely integrated with two data-rich companies (J.P. Morgan, Skyscanner) who will ground the research in a real world industrial context, as well as academic institutions from life sciences and urban studies (Glasgow Polyomics, Urban Big Data Centre). We will exploit industrial collaborations via the QuantIC innovation hub and the DataLab Innovation Centre. In each case, this project leverages existing tight-knit links to local teams. The core research topics have applications with multiple end-users (both companies/data providers, as well as their customers), allowing us to test theories in multiple domains, and transfer experience between application areas. For instance, Skyscanner customers will benefit from more effective recommendations and search results that are less biased from closed-loop interactions.
We have embedded staff with end-users (in J.P. Morgan's case they are embedded with us), and there will be separate task groups and meetings on projects with specific data providers. Each post-doc will also act as a liaison point for at least one of the external data providers. 50% of a Grade 7 PDRA will be supported at the academic data providers (UBDC, Polyomics). We will arrange periodic away days for all staff students and end-users to discuss new developments, and look for cross-fertilisation of ideas among application areas and data providers.
A senior RA will support adaptation of research-quality systems to work within the constraints of the target systems of the data providers. To ensure a lasting impact, this RA will ensure the quality of the open-source software made available for immediate use with project partners, and to manage the dissemination to the broader technical community, ensuring its longer-term legacy. Project partners will provide ongoing feedback on compliance with current standards for deployability with their teams. The impact process will be supported by Jill Ramsay, the SoCS Business Development professional, as well as BD staff at the DataLab and QuantIC Hubs.
The UoG is building a £100M interdisciplinary Research & Innovation Hub - a commitment to excellence which will include a Data Science Centre to provide an environment in which researchers involved in the generation, interrogation, analysis and visualisation of large, complex datasets can come together to stimulate new cross-disciplinary collaborative projects. Creating a culture of co-creation is at the heart of the Innovation Hub vision; embedding the Data Science Centre in the hub will enable to fully support and sustain this project and its plans for co-creation well beyond the initial EPSRC funding.
Closed-loop data science is a new, challenging topic which will take time for both researchers and end-users to grasp. This project will be closely integrated with two data-rich companies (J.P. Morgan, Skyscanner) who will ground the research in a real world industrial context, as well as academic institutions from life sciences and urban studies (Glasgow Polyomics, Urban Big Data Centre). We will exploit industrial collaborations via the QuantIC innovation hub and the DataLab Innovation Centre. In each case, this project leverages existing tight-knit links to local teams. The core research topics have applications with multiple end-users (both companies/data providers, as well as their customers), allowing us to test theories in multiple domains, and transfer experience between application areas. For instance, Skyscanner customers will benefit from more effective recommendations and search results that are less biased from closed-loop interactions.
We have embedded staff with end-users (in J.P. Morgan's case they are embedded with us), and there will be separate task groups and meetings on projects with specific data providers. Each post-doc will also act as a liaison point for at least one of the external data providers. 50% of a Grade 7 PDRA will be supported at the academic data providers (UBDC, Polyomics). We will arrange periodic away days for all staff students and end-users to discuss new developments, and look for cross-fertilisation of ideas among application areas and data providers.
A senior RA will support adaptation of research-quality systems to work within the constraints of the target systems of the data providers. To ensure a lasting impact, this RA will ensure the quality of the open-source software made available for immediate use with project partners, and to manage the dissemination to the broader technical community, ensuring its longer-term legacy. Project partners will provide ongoing feedback on compliance with current standards for deployability with their teams. The impact process will be supported by Jill Ramsay, the SoCS Business Development professional, as well as BD staff at the DataLab and QuantIC Hubs.
The UoG is building a £100M interdisciplinary Research & Innovation Hub - a commitment to excellence which will include a Data Science Centre to provide an environment in which researchers involved in the generation, interrogation, analysis and visualisation of large, complex datasets can come together to stimulate new cross-disciplinary collaborative projects. Creating a culture of co-creation is at the heart of the Innovation Hub vision; embedding the Data Science Centre in the hub will enable to fully support and sustain this project and its plans for co-creation well beyond the initial EPSRC funding.
Organisations
- University of Glasgow (Lead Research Organisation)
- Moodagent (Collaboration)
- Google (Collaboration)
- Aegean Airlines (Collaboration)
- Widex A/S (Collaboration)
- Bayerische Motoren Werke (BMW) (Collaboration)
- Thales Group (Collaboration)
- Skyscanner (Collaboration)
- Aalto University (Collaboration)
- Blue Bear (Collaboration)
Publications
Alvarez-Martin J
(2022)
Understanding the variability of pointing tasks with event-driven intermittent control
in IFAC-PapersOnLine
Anagnostopoulos C
(2018)
Large-scale predictive modeling and analytics through regression queries in data management systems
in International Journal of Data Science and Analytics
Anagnostopoulos C
(2020)
Edge-centric inferential modeling & analytics
in Journal of Network and Computer Applications
Anderson K
(2021)
Markers of Central Neuropathic Pain in Higuchi Fractal Analysis of EEG Signals From People With Spinal Cord Injury.
in Frontiers in neuroscience
Bach E
(2021)
Probabilistic framework for integration of mass spectrum and retention time information in small molecule identification.
in Bioinformatics (Oxford, England)
Bin M
(2021)
Post-lockdown abatement of COVID-19 by fast periodic switching.
in PLoS computational biology
Bin M
(2021)
Hysteresis-based supervisory control with application to non-pharmaceutical containment of COVID-19.
in Annual reviews in control
Borowska A
(2022)
Semi-Complete Data Augmentation for Efficient State Space Model Fitting
in Journal of Computational and Graphical Statistics
Borowska A
(2021)
Gaussian process enhanced semi-automatic approximate Bayesian computation: parameter inference in a stochastic differential equation system for chemotaxis
in Journal of Computational Physics
Borowska A
(2022)
Bayesian optimisation for efficient parameter inference in a cardiac mechanics model of the left ventricle.
in International journal for numerical methods in biomedical engineering
Description | Pulmonary hypertension (PH), i.e. high blood pressure in the lungs, is a serious medical condition that can damage the right ventricle of the heart and ultimately lead to heart failure. Standard diagnostic procedures are based on right-heart catheterization, which is an invasive technique that can potentially have serious side effects. Recent methodological advancements in fluid dynamics modelling of the pulmonary blood circulation system promise to mathematically predict the blood pressure based on non-invasive measurements of the blood flow. Thus, subsequent to PH diagnostication, further investigations would no longer require catheterization. However, in order for these alternative techniques to be applicable in the clinic, accurate model calibration and parameter estimation are paramount. Medical interventions taken to combat high blood pressure (as predicted from the mathematical model) alter the underlying cardiovascular physiology, thus interfering with the parameter estimation procedure. In our work, we have carried out a series of cardiovascular simulations to assess the reliability of cardiovascular physiological parameter estimation in the presence of medical interventions. Our principal result is that if the closed-loop effect of medical interventions is ignored, there is a significant estimation bias, which we have quantified under different assumed physiological scenarios. However, if the closed-loop effect of medical interventions is properly accounted for, our model calibration provides accurate parameter estimates, including a reliable quantification of the intrinsic estimation uncertainty. Details can be found in [reference the two papers by Husmeier & Paun]. This finding has important implications for the applicability of cardio-physiological modelling in the clinical practice. |
Exploitation Route | Applied in a variety of areas. Used by Aegean airlines to change the way they model pricing decisions |
Sectors | Digital/Communication/Information Technologies (including Software) Financial Services and Management Consultancy Healthcare Leisure Activities including Sports Recreation and Tourism Transport |
URL | https://www.gla.ac.uk/schools/computing/research/researchsections/ida-section/closedloop/ |
Description | They have been used by Aegean airlines to plan flight price experiments |
First Year Of Impact | 2022 |
Sector | Aerospace, Defence and Marine,Leisure Activities, including Sports, Recreation and Tourism |
Impact Types | Economic |
Description | Aegean airlines donation |
Amount | € 65,000 (EUR) |
Organisation | Aegean Airlines |
Sector | Private |
Country | Greece |
Start | 03/2022 |
Description | Aegean airlines donation |
Amount | € 74,000 (EUR) |
Organisation | Aegean Conferences |
Sector | Private |
Country | United States |
Start | 08/2023 |
End | 08/2028 |
Description | COVID-19: Fast multi-shot epidemic interventions for post lockdown Covid-19 mitigation: Open-loop mitigation strategies |
Amount | £113,258 (GBP) |
Funding ID | EP/V018450/1 |
Organisation | Engineering and Physical Sciences Research Council (EPSRC) |
Sector | Public |
Country | United Kingdom |
Start | 07/2020 |
End | 12/2020 |
Description | Conversational interactoin |
Amount | £75,000 (GBP) |
Organisation | Moodagent |
Sector | Private |
Country | Denmark |
Start | 09/2019 |
End | 04/2023 |
Description | Designing Interaction Freedom via Active Inference (DIFAI) |
Amount | £2,137,996 (GBP) |
Funding ID | EP/Y029178/1 |
Organisation | Engineering and Physical Sciences Research Council (EPSRC) |
Sector | Public |
Country | United Kingdom |
Start | 01/2024 |
End | 12/2029 |
Description | Development of voice-based agent for music interaction |
Amount | £18,000 (GBP) |
Organisation | Moodagent |
Sector | Private |
Country | Denmark |
Start | 03/2019 |
End | 06/2019 |
Description | Google Glasgow collaboration |
Amount | $87,000 (USD) |
Organisation | |
Sector | Private |
Country | United States |
Start | 02/2021 |
End | 05/2021 |
Description | Google Soli donation |
Amount | $200,000 (USD) |
Organisation | |
Sector | Private |
Country | United States |
Start | 12/2021 |
Description | HMI design for operator control and visualisation for autonomous vehicle architecture |
Amount | £10,000 (GBP) |
Organisation | Blue Bear |
Sector | Private |
Country | United Kingdom |
Start | 04/2019 |
End | 07/2019 |
Description | Moodagent Closed-loop Search PhD Studentship |
Amount | £37,000 (GBP) |
Organisation | Moodagent |
Sector | Private |
Country | Denmark |
Start | 03/2022 |
End | 09/2025 |
Description | Quantum Imaging for Monitoring of Wellbeing & Disease in Communities |
Amount | £5,625,019 (GBP) |
Funding ID | EP/T021020/1 |
Organisation | Engineering and Physical Sciences Research Council (EPSRC) |
Sector | Public |
Country | United Kingdom |
Start | 05/2021 |
End | 08/2026 |
Description | Quantum Imaging for Monitoring of Wellbeing & Disease in Communities EP/T021020/1 |
Amount | £5,490,693 (GBP) |
Organisation | Engineering and Physical Sciences Research Council (EPSRC) |
Sector | Public |
Country | United Kingdom |
Start | 07/2020 |
End | 07/2025 |
Description | TRACE (Integration and Harmonization of Logistics Operations) |
Amount | € 9,500,000 (EUR) |
Funding ID | 101104278 |
Organisation | European Commission |
Sector | Public |
Country | European Union (EU) |
Start | 05/2023 |
End | 05/2026 |
Description | Turing AI Fellowship:Neural Conversational Information Seeking Assistant |
Amount | £1,623,810 (GBP) |
Funding ID | EP/V025708/1 |
Organisation | Engineering and Physical Sciences Research Council (EPSRC) |
Sector | Public |
Country | United Kingdom |
Start | 01/2021 |
End | 12/2025 |
Description | Urban Canyon project |
Amount | £10,000 (GBP) |
Organisation | Thales Group |
Sector | Private |
Country | France |
Start | 03/2020 |
End | 12/2020 |
Title | A Hybrid Conditional Variational Autoencoder Model for Personalised Top-N Recommendation |
Description | |
Type Of Material | Database/Collection of data |
Year Produced | 2020 |
Provided To Others? | Yes |
URL | http://researchdata.gla.ac.uk/id/eprint/1043 |
Title | Cardiovascular Modelling Subject to Medical Interventions |
Description | This GitHub repository contains data and code to reproduce the results reported in the paper 'Inference in Cardiovascular Modelling Subject to Medical Interventions' by L. Mihaela Paun, Agnieszka Borowska, Mitchel J. Colebank, Mette S. Olufsen and Dirk Husmeier, published in the Proceedings of ICSTA 2021. |
Type Of Material | Computer model/algorithm |
Year Produced | 2021 |
Provided To Others? | Yes |
Impact | The software allows the results of the above-mentioned paper to be reproduced, and it can be used more widely to correct closed-loop effects in cardiovascular modelling and inference subject to medical interventions. |
URL | https://github.com/LMihaelaP/Cardio_Vasodilation.git |
Title | DDA and DIA data for ViMMS 2.0 |
Description | This dataset contains the mzML files produced from liquid chromatography tandem mass spectrometry (LC-MS/MS) measurements of 6 beer samples. Data acquisition was performed using newly developed Data-Dependent Acquisition (DDA) and Data-Independent Acquisition (DIA) controllers in the ViMMS 2.0 framework. For DDA this includes the fullscan, Top-N and all methods introduced in the TopNEXt paper. For DIA this includes the AIF and SWATH methods. |
Type Of Material | Database/Collection of data |
Year Produced | 2022 |
Provided To Others? | Yes |
URL | http://researchdata.gla.ac.uk/id/eprint/1382 |
Title | Does Interacting Help Users Better Understand the Structure of Probabilistic Models? |
Description | The dataset includes the responses and demographics of participants in the evaluation user study of interactive visualizations of probabilistic models presented in the paper. The analysis code is also included. |
Type Of Material | Database/Collection of data |
Year Produced | 2022 |
Provided To Others? | Yes |
URL | http://researchdata.gla.ac.uk/id/eprint/1248 |
Title | Neural Network-Based Left Ventricle Geometry Prediction from Cardiac Magnetic Resonance Images |
Description | Github repository including the software and data for the paper by Lukasz Romaszko, Agnieszka Borowska, Alan Lazarus, David Dalton, Colin Berry, Xiaoyu Luo, Dirk Husmeier and Hao Gao (2021): ``Neural network-based left ventricle geometry prediction from CMR images with application in biomechanics", Artificial Intelligence in Medicine, Volume 119, September 2021, 102140, doi: https://doi.org/10.1016/j.artmed.2021.102140 In particular, the Github repository contains pre-processed data (a subset of re-scaled and cropped original CMR images as well as segmented images and LV geometries), as well as the code (two-stage CNN: segmentation network and geometry prediction network). |
Type Of Material | Computer model/algorithm |
Year Produced | 2021 |
Provided To Others? | Yes |
Impact | The Github repository allows readers to reproduce the results reported in the above paper and to use the software to automatically predict the shape of the left ventricle of the heart from their own cardiac magnetic resonance images. This is a prerequisite for any subsequent cardiac mechanic modelling. |
URL | https://github.com/aborowska/LVgeometry-prediction |
Title | Rapid Development of Improved Data-Dependent Acquisition Strategies |
Description | The dataset includes two runs (injections) of the Serum (QCA) and Beer (QCB) samples measured with various controllers introduced in the paper. |
Type Of Material | Database/Collection of data |
Year Produced | 2021 |
Provided To Others? | Yes |
Impact | none |
URL | http://researchdata.gla.ac.uk/id/eprint/1137 |
Title | Semi-Complete Data Augmentation for Efficient State Space Model Fitting |
Description | We propose a novel efficient model-fitting algorithm for state space models. State space models are an intuitive and flexible class of models, frequently used due to the combination of their natural separation of the different mechanisms acting on the system of interest: the latent underlying system process; and the observation process. This flexibility, however, often comes at the price of more complicated model-fitting algorithms due to the associated analytically intractable likelihood. For the general case a Bayesian data augmentation approach is often employed, where the true unknown states are treated as auxiliary variables and imputed within the MCMC algorithm. However, standard "vanilla" MCMC algorithms may perform very poorly due to high correlation between the imputed states and/or parameters, often leading to model-specific bespoke algorithms being developed that are non-transferable to alternative models. The proposed method addresses the inefficiencies of traditional approaches by combining data augmentation with numerical integration in a Bayesian hybrid approach. This approach permits the use of standard "vanilla" updating algorithms that perform considerably better than the traditional approach in terms of improved mixing and lower autocorrelation, and has the potential to be incorporated into bespoke model-specific algorithms. To demonstrate the ideas, we apply our semi-complete data augmentation algorithm to different application areas and models, leading to distinct implementation schemes and improved mixing and demonstrating improved mixing of the model parameters. |
Type Of Material | Database/Collection of data |
Year Produced | 2022 |
Provided To Others? | Yes |
URL | https://tandf.figshare.com/articles/dataset/Semi-Complete_Data_Augmentation_for_Efficient_State_Spac... |
Title | Semi-Complete Data Augmentation for Efficient State Space Model Fitting |
Description | We propose a novel efficient model-fitting algorithm for state space models. State space models are an intuitive and flexible class of models, frequently used due to the combination of their natural separation of the different mechanisms acting on the system of interest: the latent underlying system process; and the observation process. This flexibility, however, often comes at the price of more complicated model-fitting algorithms due to the associated analytically intractable likelihood. For the general case a Bayesian data augmentation approach is often employed, where the true unknown states are treated as auxiliary variables and imputed within the MCMC algorithm. However, standard "vanilla" MCMC algorithms may perform very poorly due to high correlation between the imputed states and/or parameters, often leading to model-specific bespoke algorithms being developed that are nontransferable to alternative models. The proposed method addresses the inefficiencies of traditional approaches by combining data augmentation with numerical integration in a Bayesian hybrid approach. This approach permits the use of standard "vanilla" updating algorithms that perform considerably better than the traditional approach in terms of improved mixing and lower autocorrelation, and has the potential to be incorporated into bespoke model-specific algorithms. To demonstrate the ideas, we apply our semi-complete data augmentation algorithm to different application areas and models, leading to distinct implementation schemes and improved mixing and demonstrating improved mixing of the model parameters. Supplementary materials for this article are available online. |
Type Of Material | Database/Collection of data |
Year Produced | 2022 |
Provided To Others? | Yes |
URL | https://tandf.figshare.com/articles/dataset/Semi-Complete_Data_Augmentation_for_Efficient_State_Spac... |
Title | Semi-Complete Data Augmentation for Efficient State Space Model Fitting |
Description | We propose a novel efficient model-fitting algorithm for state space models. State space models are an intuitive and flexible class of models, frequently used due to the combination of their natural separation of the different mechanisms acting on the system of interest: the latent underlying system process; and the observation process. This flexibility, however, often comes at the price of more complicated model-fitting algorithms due to the associated analytically intractable likelihood. For the general case a Bayesian data augmentation approach is often employed, where the true unknown states are treated as auxiliary variables and imputed within the MCMC algorithm. However, standard "vanilla" MCMC algorithms may perform very poorly due to high correlation between the imputed states and/or parameters, often leading to model-specific bespoke algorithms being developed that are nontransferable to alternative models. The proposed method addresses the inefficiencies of traditional approaches by combining data augmentation with numerical integration in a Bayesian hybrid approach. This approach permits the use of standard "vanilla" updating algorithms that perform considerably better than the traditional approach in terms of improved mixing and lower autocorrelation, and has the potential to be incorporated into bespoke model-specific algorithms. To demonstrate the ideas, we apply our semi-complete data augmentation algorithm to different application areas and models, leading to distinct implementation schemes and improved mixing and demonstrating improved mixing of the model parameters. Supplementary materials for this article are available online. |
Type Of Material | Database/Collection of data |
Year Produced | 2022 |
Provided To Others? | Yes |
URL | https://tandf.figshare.com/articles/dataset/Semi-Complete_Data_Augmentation_for_Efficient_State_Spac... |
Title | Virtual Mass Spectrometer |
Description | A computational method for simulating a mass spectrometer operating in data dependent acquisition mode to assist users in the optimising their own acquisition. |
Type Of Material | Computer model/algorithm |
Year Produced | 2019 |
Provided To Others? | Yes |
Impact | None yet |
URL | http://github.com/sdrogers/vimms |
Description | Aegean Airlines |
Organisation | Aegean Airlines |
Country | Greece |
Sector | Private |
PI Contribution | NDA signed to enable discussions with their Data Analytics team |
Collaborator Contribution | Still in early stage of discussions |
Impact | So far the main outcome is an NDA and agreement to collaborate |
Start Year | 2020 |
Description | Blue bear |
Organisation | Blue Bear |
Country | United Kingdom |
Sector | Private |
PI Contribution | Joint work on human-computer interface for their autonomous drones system |
Collaborator Contribution | provision of research challenges |
Impact | none yet |
Start Year | 2019 |
Description | Google Advanced Engineering |
Organisation | |
Country | United States |
Sector | Private |
PI Contribution | joint research on radar and machine learning |
Collaborator Contribution | provision of radar hardware, and problem domain |
Impact | none yet |
Start Year | 2020 |
Description | Moodagent |
Organisation | Moodagent |
Country | Denmark |
Sector | Private |
PI Contribution | Joint work on music information retrieval |
Collaborator Contribution | Sharing access to user interaction data, design requests and expertise on music information retrieval. |
Impact | no outputs yet |
Start Year | 2019 |
Description | Prof. Juho Rousu |
Organisation | Aalto University |
Department | Department of Computer Science |
Country | Finland |
Sector | Academic/University |
PI Contribution | Prof. Rousu and I obtained funding from SICSA for him to visit my group in Glasgow for three months in Summer 2019. Prof Rousu is an expert in the analysis of metabolomic data. Collaboration from his visit has two strands: one stemming from the BBSRC project (Combatting...), in which we are working together on new IOKR methods for predicting the products of Biosynthetic Gene Clusters and a second strand stemming from the EPSRC project (Closed-loop...), in which we are building probabilistic models that incorporate retention time into annotation, that could be used in a closed-loop context to prioritise MS acquisition. |
Collaborator Contribution | Prof Rousu has provided expertise in kernel methods for metabolite ID, and retention time prediction. His group also funded a visit by one of his PGR students (Eric Bach) to my group for several weeks in Summer 2019 (a direct result of Prof. Rousu's visit) |
Impact | 1 Draft publication awaiting submission |
Start Year | 2019 |
Description | Research Furth with BMW Research Group |
Organisation | Bayerische Motoren Werke (BMW) |
Country | Germany |
Sector | Academic/University |
PI Contribution | My PhD Student Mrs N Harth is visiting the BMW Research Group, Munich, Germany, in a Research Furth (University of Glasgow) for conducting research in advanced federated learning in vehicle networks. |
Collaborator Contribution | BMW Research Group is providing knowledge regarding the application requirements and the underlying in-vehicle network infrastructure for building predictive models for recognising drivers' behaviour based on the principles of Federated Learning. |
Impact | Preliminary in-vehicle predictive modelling and first experimental evaluations on candidate distributed and federated learning statistical models. |
Start Year | 2019 |
Description | Skyscanner |
Organisation | Skyscanner |
Country | United Kingdom |
Sector | Private |
PI Contribution | Joint discussions on collaboration. Exploration of initial datasets and analysis with machine learning tools |
Collaborator Contribution | Sharing of data, and possible closed-loop application scenarios |
Impact | none yet |
Start Year | 2017 |
Description | Thales studentship |
Organisation | Thales Group |
Department | Thales Optronics Limited |
Country | United Kingdom |
Sector | Private |
PI Contribution | expertise in Ai & human interaction |
Collaborator Contribution | application domain, testing domain, subject expertise |
Impact | none yet |
Start Year | 2020 |
Description | widex A/S |
Organisation | Widex A/S |
Country | Denmark |
Sector | Private |
PI Contribution | Joint sponsorship of Ph.D. student to look at Bayesian Optimisation of subjective experience with hearing aids. |
Collaborator Contribution | Provision of research challenges, access to data and joint supervision of the student. |
Impact | none yet |
Start Year | 2018 |
Title | ViMMS: the Virtual Metabolomics Mass Spectrometer |
Description | This software emulates a chromatography/mass spectrometry system for the purposes of exploring behaviours of different run controllers for metabolomics. |
Type Of Technology | Software |
Year Produced | 2019 |
Open Source License? | Yes |
Impact | None |
URL | https://doi.org/10.3390/metabo9100219 |
Description | Aegean Airlines |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Conversations with Aegean Airlines about involvement in Closed-loop data science project. Discussions with CEO and COO. Agreement to do some joint research once their Data Science team was more established. |
Year(s) Of Engagement Activity | 2019 |
URL | https://en.aegeanair.com/ |
Description | Aegean airlines |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Ongoing collaboration with Aegean airlines, including multiple multi-day visits to Athens |
Year(s) Of Engagement Activity | 2020,2021,2022 |
Description | BMW collaboration discussions |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Discussions with BMW about collaboration and Ph.D scholarships |
Year(s) Of Engagement Activity | 2023 |
Description | Computational Interaction Summer School |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Postgraduate students |
Results and Impact | Dr John Williamson helped organise and presented at the Computational Interaction Summer school, teaching research students about work related to the Closed-loop interaction project. |
Year(s) Of Engagement Activity | 2018 |
URL | http://www.dcs.gla.ac.uk/~jhw/computationalinteraction/chi2018/ |
Description | Computationally efficient parameter estimation and uncertainty quantification in complex physiological systems |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Invited keynote lecture given at the 2nd International Conference on Statistics: Theory and Applications (ICSTA'20), held as a virtual conference via Zoom, 19-21 August 2020. |
Year(s) Of Engagement Activity | 2021 |
URL | https://2020.icsta.net/program/ |
Description | Conversations with Google Advanced Engineering team |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Conversations with Google Advanced Engineering team about joint work on their Soli framework. |
Year(s) Of Engagement Activity | 2019 |
URL | https://atap.google.com/soli/ |
Description | Dagstuhl seminar on Computational Interaction and Autonomous Vehicles |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Other audiences |
Results and Impact | Research roadmap discussions between academics and industry on computational modelling in autonomous vehicle development. |
Year(s) Of Engagement Activity | 2022 |
URL | https://www.dagstuhl.de/en/program/calendar/semhp/?semnr=22102 |
Description | Discussions with Huawei |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Discussions with Huawei Finland in both Glasgow and Helsinki about joint research projects. |
Year(s) Of Engagement Activity | 2019 |
Description | Discussions with the BBC |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Presentations and discussions about Closed-loop interaction and possible joint training and research |
Year(s) Of Engagement Activity | 2018,2019 |
Description | Inference in Cardiovascular Modelling Subject to Medical Interventions |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Talk at the International Conference on Statistics: Theory and Applications (ICSTA 2021), given by Dirk Husmeier |
Year(s) Of Engagement Activity | 2021 |
URL | https://avestia.com/ICSTA2021_Proceedings/files/papers.html |
Description | Interactions with Thales |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Industry/Business |
Results and Impact | Agreement to participate in a project and for them to fund a Ph.D. studentship |
Year(s) Of Engagement Activity | 2019 |
URL | https://www.thalesgroup.com/en/europe/united-kingdom/about-thales-uk/our-uk-locations/thales-scotlan... |
Description | Invited talk at the University of Edinburgh which was live-streamed and recorded |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Talk entitled "Gaussian process enhanced semi-automatic ABC for inference in a stochastic differential equation system for chemotaxis" by Dirk Husmeier's post-doc Agnieszka Borowska at a Statistics seminar of the University of Edinburgh on the 8th of November 2021. The talk questions afterwards, including a follow-up discussion on gather.town. The recording of the talk can be accessed here: https://ed-ac-uk.zoom.us/rec/play/f-leD9akIBpTJCiF9ZIlKdq2QEYByLsP79lV4ZwPtaXA3iv0L12TYBLI8cRgoJiWvuIowPSt_Necyekm.YwhHusq0ucFvlT0S?continueMode=true&_x_zm_rtaid=9RE7lTR9SviipSXtp58ZrQ.1637266969453.752b91c756c02a3426d923e4580c6e85&_x_zm_rhtaid=330 |
Year(s) Of Engagement Activity | 2021 |
URL | https://www.maths.ed.ac.uk/school-of-mathematics/events/statistics |
Description | Meeting with British Telecom |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Industry/Business |
Results and Impact | Meeting with a variety of British Telecom technical leads to discuss Closed-loop interaction and possible collaboration. Joint sponsorship of Ph.D. students discussed |
Year(s) Of Engagement Activity | 2019 |
Description | Mini-symposium "Stochastic models in biology informed by data" at BMC BAMC 2021 |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Talk entitled "Parameter estimation and uncertainty quantification in a stochastic differential equation model of cell movement and chemotaxis" given by Dirk Husmeier's post-doc Agnieszka Borowska at the Mini-symposium "Stochastic models in biology informed by data" at the British Applied Mathematics Colloquium on the 6th of April 2021, which sparked questions and discussion afterwards, including follow-up emails. |
Year(s) Of Engagement Activity | 2021 |
URL | https://sites.google.com/view/bmcbamc2021/home |
Description | Naver Labs |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Presentation and discussions with Naver Labs concerning recommender systems (inc. feedback loops) and ideas for future collaborations. |
Year(s) Of Engagement Activity | 2019 |
Description | Presentation in the SICSA conference |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Other audiences |
Results and Impact | Dr. Saeed Maadi presented our work (CAV simulation by using closed-loop approach) in the interdisciplinary session on 'Developing the Future of Transport' at the SICSA conference on Oct 1st. |
Year(s) Of Engagement Activity | 2020 |
Description | Presentation to British Telecom |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Industry/Business |
Results and Impact | A delegation of approximately 12 executives from British Telecom Research attended a series of presentations at the School of Computing Science, at which the CLDS project was presented. This resulted in a series of follow-up discussions on future research collaboration. |
Year(s) Of Engagement Activity | 2019 |
Description | Presentation to Robert Bosch Digital technologies team |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Presentation to Robert Bosch Digital technologies team making them aware of closed-loop issues in data science. |
Year(s) Of Engagement Activity | 2019 |
Description | Scottish Government Data Delivery Group |
Form Of Engagement Activity | A formal working group, expert panel or dialogue |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Policymakers/politicians |
Results and Impact | Participation by Prof Murray-Smith in the Scottish Government's Data Delivery group, as a member of that group, helping to steer Scottish Government's data strategy. Multiple meetings. |
Year(s) Of Engagement Activity | 2019 |
Description | Scottish Government delegation to India |
Form Of Engagement Activity | A formal working group, expert panel or dialogue |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Policymakers/politicians |
Results and Impact | As part of a Data Science delegation by Scottish Deputy First Minister John Swinney, we had a variety of meetings with Indian businesses, universities and government departments, including round table discussions at the British High Commission. |
Year(s) Of Engagement Activity | 2018 |
URL | https://blogs.gov.scot/education/2018/12/03/deputy-first-minister-john-swinney-reflects-on-his-week-... |
Description | Talk at the "ML in PL 2021" conference |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Talk entitled "Neural network-based left ventricle geometry prediction from CMR images with application in biomechanics" given by Dirk Husmeier's post-doc Agnieszka Borowska at the "ML in PL 2021" conference (online) on the 7th of November 2021. The talk sparked questions afterwards, including requests for further information. |
Year(s) Of Engagement Activity | 2021 |
URL | https://conference2021.mlinpl.org/ |
Description | Talk to BMW Research Group (DE) |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Talk and presentation of the closed-loop activities regarding in-vehicle predictive modelling with Dr. Hans-Jörg Vögel, Manager AI, Robotics, Cognitive Systems of the BMW Research Group for collaboration in overlapping research interests. |
Year(s) Of Engagement Activity | 2019 |
Description | Talk to Cisco |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | A delegation from Cisco attended a presentation on the CLDS project, specifically interactive probabilistic modelling and recommender systems topics. |
Year(s) Of Engagement Activity | 2019 |
Description | Talk to Huawei Technologies R&D UK |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Industry/Business |
Results and Impact | Talk and presentation of the closed-loop project and potential further funding on bio-inspired analytics methods with the Huawei UK R&D (HIRP Calls). |
Year(s) Of Engagement Activity | 2020 |
Description | Talk to NXP |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Industry/Business |
Results and Impact | Talk and presentation to NXP for in-vehicle predictive analytics; the target is potential funding for in-vehicle network analytics. |
Year(s) Of Engagement Activity | 2020 |
Description | Talk to UK Cisco CTO Group |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Industry/Business |
Results and Impact | Talk and presentation about in-network intelligent and resilient predictive analytics activities from the closed-loop to Cisco UK CTO Group; the target was potential research collaborations and funding. |
Year(s) Of Engagement Activity | 2019 |
Description | Talk to an industrial delegation from Hong Kong fintech sector |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Talk and presentation about the closed-loop project to delegates from 12 HK fintech companies; the target was potential research collaborations and funding. |
Year(s) Of Engagement Activity | 2019 |
Description | Talk with an industrial delegation from Zhejiang Provincial Department of Science and Technology |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Talk and presentation about the close-loop project to delegates from 20 companies and industrial labs from Zhejiang, China. |
Year(s) Of Engagement Activity | 2019 |
Description | Talks and discussions with Rolls Royce |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Industry/Business |
Results and Impact | Two meetings/seminars with Rolls Royce (local RR R&D and RR HQ) about AI and machine learning in advanced manufacturing. The closed-loop project was presented and several potential research collaborations are being explored (including joint training and research). |
Year(s) Of Engagement Activity | 2019,2020 |
Description | Tata Consultancy Services forum |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Presented the Closed-loop Data science concept to a group of about 100 industry professionals as part of the Tata Consultancy Services Forum in Edinburgh. |
Year(s) Of Engagement Activity | 2017,2018 |
URL | https://digitaldirections.com/why-untying-the-data-loop-is-crucial-in-this-age-of-business-4-0/ |
Description | Telefonica Barcelona |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Presentations and joint development of research plans for Telefonica's health-related research Proposal for a jointly funded Ph.D. project from Telefonica |
Year(s) Of Engagement Activity | 2018 |
Description | meeting with Aegean airlines |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | joint work with Aegean data team for planning real-world closed-loop experimetns |
Year(s) Of Engagement Activity | 2022 |