Investigating the roles of non-coding RNA in meiotic recombination
Lead Research Organisation:
Babraham Institute
Department Name: UNLISTED
Abstract
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Technical Summary
Only a tiny fraction of the human genome encodes proteins, but recent studies show that almost the entire genome is transcribed into RNA. This means that many more genes produce RNA than produce proteins, and the key aim of my research is to find functions for these non-protein coding RNAs.
We are particularly interested in the potential roles of non-coding RNAs in coordinating genome rearrangements. Although genomes are often thought of as largely unchanging, they undergo extensive recombination during meiosis, the specialised cell division required for sexual reproduction. These recombination events are vital for successful meiosis and are responsible for most of the mixing of parental traits in children.
We and others have found evidence that non-protein coding RNAs and their associated enzymes can influence DNA recombination. This raises the fascinating possibility that non-coding RNAs can influence genome changes, and therefore that organisms have the ability to control how traits are assorted between progeny during reproduction. Furthermore, studies of meiotic recombination are medically important as cells that undergo too little recombination or recombination in the wrong place end up aneuploid, leading to miscarriages and conditions such as Down Syndrome.
The aim of this PhD project is to investigate the roles of non-coding RNAs in coordinating meiotic recombination. It will particularly focus on the changes in chromosome structure that precede recombination and the importance of these changes to the initiation of recombination.
The realisation that cells produce so much non-coding RNA provides new areas of fundamental biology to explore, and non-coding RNAs are of considerable pharmaceutical interest. This project will provide much sought-after experience in this fast-moving area of biology, which should be very beneficial to the successful candidate's future scientific career.
We are particularly interested in the potential roles of non-coding RNAs in coordinating genome rearrangements. Although genomes are often thought of as largely unchanging, they undergo extensive recombination during meiosis, the specialised cell division required for sexual reproduction. These recombination events are vital for successful meiosis and are responsible for most of the mixing of parental traits in children.
We and others have found evidence that non-protein coding RNAs and their associated enzymes can influence DNA recombination. This raises the fascinating possibility that non-coding RNAs can influence genome changes, and therefore that organisms have the ability to control how traits are assorted between progeny during reproduction. Furthermore, studies of meiotic recombination are medically important as cells that undergo too little recombination or recombination in the wrong place end up aneuploid, leading to miscarriages and conditions such as Down Syndrome.
The aim of this PhD project is to investigate the roles of non-coding RNAs in coordinating meiotic recombination. It will particularly focus on the changes in chromosome structure that precede recombination and the importance of these changes to the initiation of recombination.
The realisation that cells produce so much non-coding RNA provides new areas of fundamental biology to explore, and non-coding RNAs are of considerable pharmaceutical interest. This project will provide much sought-after experience in this fast-moving area of biology, which should be very beneficial to the successful candidate's future scientific career.
Planned Impact
unavailable
Organisations
People |
ORCID iD |
Stephen Frenk (Principal Investigator) |
Publications
Frenk S
(2014)
The nuclear exosome is active and important during budding yeast meiosis.
in PloS one
Frenk S
(2017)
Aging yeast gain a competitive advantage on non-optimal carbon sources.
in Aging cell
Description | We examined the role of unstable non-coding RNAs in meiosis. We disproved the published hypothesis that these species should become stable in meiosis and proved that this instability is important for efficient meiotic progression. We also made the surprising finding that yeast ageing can improve adaptation to new environments. |
Exploitation Route | This adds to our understanding of non-coding RNA biology, which is thought to be important in diverse areas of biological science. Our findings on ageing will be useful in understanding the potential for control of the ageing process. |
Sectors | Healthcare |
Description | We published the results of this investigation this year. |
First Year Of Impact | 2014 |
Sector | Healthcare |
Description | Poster at Ageing meeting |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Other academic audiences (collaborators, peers etc.) |
Results and Impact | General interest in presented work. networking |
Year(s) Of Engagement Activity | 2014 |
Description | Poster at EMBO transcription meeting |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Other academic audiences (collaborators, peers etc.) |
Results and Impact | General interest in presented work. Presentation by my student, he successfully approached future employers. |
Year(s) Of Engagement Activity | 2014 |
Description | Schools day (annual) |
Form Of Engagement Activity | Participation in an open day or visit at my research institution |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Schools |
Results and Impact | Visit by school children to do experiments in BI labs. All BI labs participate. |
Year(s) Of Engagement Activity | 2010,2011,2012,2013,2014,2015,2016 |
Description | Talk and poster at EMBO Evolution meeting |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Other academic audiences (collaborators, peers etc.) |
Results and Impact | General interest in presented work. networking |
Year(s) Of Engagement Activity | 2014 |
Description | Talk at Epigenesys meeting |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Presentation at Epigenesys meeting |
Year(s) Of Engagement Activity | 2016 |
Description | Talk at UK RNA meeting |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Conference presentation |
Year(s) Of Engagement Activity | 2016 |