Ediacaran constraints on early animal evolution

Lead Research Organisation: University of Cambridge
Department Name: Zoology

Abstract

Animals first appear in the fossil record during the Ediacaran time period (631-541 million years ago), but it takes almost 50 million years for animal evolution to really take off, with a rapid diversification of animal life known as the Cambrian Explosion (~540 Ma). The biology and ecology of Ediacaran organisms are not well resolved because their body-plans are fundamentally different to both life today and elsewhere in the fossil record. Consequently, little is known about how the key evolutionary processes of competition and reproduction operate during the Ediacaran, and so it is not clear what role these factors play in the relatively slow start to animal evolution. The overarching objective of this proposal is to understand the interplay of these processes during the Ediacaran and how they influenced early animal evolution.

Ecological statistics are incredibly valuable for studying Ediacaran palaeontology because entire communities are captured in the fossil record, opening the door for the use of techniques normally only applied to living systems. These multiple "snap-shots" of Ediacaran life exist because thousands of immobile organisms were killed and preserved where they lived. This in-situ preservation means that the positions of the fossils on their rock surface encapsulate their life-history: how they reproduced, interacted with each other and with their environment. My previous work utilised spatial analyses to reconstruct how these key evolutionary processes of reproduction and competition operated in the Ediacaran, finding at least one species was dominantly asexual, producing colonies of clones, and that competition between species was relatively rare.

In this proposal I will investigate the consequences of Ediacaran clonal colonies on early animal evolution by addressing three key questions:

1) Are low Ediacaran competition rates a consequence of the dominance of clonal colonies? I will establish the extent to which Ediacaran communities were dominated by colonies of clones, and whether the inter-connectedness within these clonal colonies could have led to resource sharing, reducing competition. Competition is likely reduced for clonal colonies because if resources can be shared within a colony, there is no benefit to individuals out-competing their neighbouring clone.

2) Are Ediacaran ecosystems fundamentally different to modern ones? The relatively low levels of competition in Ediacaran communities stands in stark contrast to modern deep-sea systems, where competition is pervasive, and most species are thought to compete with each other. By analysing the fine-scale community structure of modern deep-sea communities, and comparing these details to Ediacaran communities, I will establish how the Ediacaran was different to the modern, and work out whether such differences were due to the prevalence of clonal colonies, or merely the result of differing environments.

3) Are Ediacaran evolutionary rates fundamentally slow? Having established the prevalence of clonal colonies and their impact on competition and community structure, I will feed this information into theoretical models of trait evolution and genetic diversification. By comparing how these models differ between the Ediacaran and modern communities, I will investigate the repercussions of any differences on evolutionary rates to establish whether Ediacaran evolutionary rates were reduced because of widespread clonality, thus limiting early animal evolution.

Planned Impact

There are three non-academic groups that will benefit from my research, and that I will target in my Pathways to Impact plan.

The Interested Public
Understanding the origins of animals has enormous public interest, but is normally focused on the older Cambrian fossils. Recent work has demonstrated that animal life started in the Ediacaran, and I am working to increase awareness of the existence and importance of Ediacaran fauna through public talks and exhibits at science festivals. I regularly give talks to local groups in Newfoundland, Canada through the continued collaboration with Discovery Aspiring Geopark (see letter of support). In Cambridge I give talks to the general public (e.g. at Pint of Science) as well as local interest groups such as the Friends of the Sedgwick Museum and at the Charnia Research Group, a group comprising of interested people from Natural England and local museums, local land owners and academics interested in Charnwood and Ediacaran palaeobiology.

Educators
In Newfoundland I will host a workshop for primary school and secondary school science teachers, proving the syllabus and materials for a module on Ediacaran palaeontology and how local fossil sites inform our understanding of the evolution of life on Earth. In the UK I will develop an online school resource primarily aimed at Upper Key Stage 2: Evolutionary and inheritance and Key Stage 3: Science as evidence for evolution.

Geo-conservation and tourism
I am collaborating with The Discovery Aspiring Geopark, an organisation applying for UNESCO Geopark status, with their application to get Geopark status for a region of the Bonavista Pennisula, Newfoundland, Canada. This application would help to preserve the local fossil sites as well as increasing tourism, thus helping the local economy. I will also continue to share my laser-scans of fossil surfaces with people interested in monitoring erosion of these key sites.
 
Description Significant new knowledge generated:
Most modern animal groups first appear in the fossil record during the Cambrian time period so suddenly that this has been termed the Cambrian Explosion. Understanding the driving factors behind the Cambrian explosion is crucial to understanding the origins of animals and the evolution of life on Earth. In Mitchell et al. 2020 (Interface Focus) we studied some of the earliest animal communities, found in the Ediacaran period, just before the Cambrian to determine the important of environmental patchiness to Ediacaran organisms. We found that there was a significant increase in the importance and influence of environmental patchiness throughout the Ediacaran, and that this increase in importance corresponded to an increase in species richness. We proposed that there is a feedback of evolutionary diversification whereby the evolution of grazers facilitated a shift towards increased habitat and water column patchiness leading to increased species diversity. Our work provide support for the Savannah hypothesis of early animal evolution which suggests that the late Ediacaran taxonomic diversification was a benthic event.

New or improved research methods or skills developed;
Mitchell et al. 2020 (Progress in Oceanography, Communications Biology) and Mitchell et al. 2021 (Scientific Reports) developed the application of Bayesian network inference to marine systems to investigate ecosystem structure and infer the ecosystem-wide effects of past and potentially future changes.
Exploitation Route The application of Bayesian network inference to ecosystems can be applied to many different systems to infer past and future change. These methods could be used to help conservation biologists understand the consequences of climate change.
Sectors Environment

 
Description There are three different ways in which this work has had societal impact. First, we worked with the Discovery Aspiring, Newfoundland, Canada to help to support community outreach and their application for UNESCO world heritage status, which they received in 2020. This work involved giving talks at local events and within local schools and providing information and graphics for their application. Second, in the UK, we have spoken to large public science events, including AAAS 2023 panel discussion. Thirdly, our work has been covered within the BBC and PBS documentary Earth: Snowball (2023), where we discussed the work done during this grant work during.
First Year Of Impact 2023
Sector Leisure Activities, including Sports, Recreation and Tourism,Culture, Heritage, Museums and Collections
Impact Types Societal

 
Description Alternate stable biospheres - modelling the microbial to metazoan transition
Amount £109,700 (GBP)
Organisation University of Cambridge 
Sector Academic/University
Country United Kingdom
Start 09/2023 
End 09/2025
 
Title Data From: The influence of environmental setting on the community ecology of Ediacaran organisms 
Description Taxa ID, Spatial positions and sizes (where appropriate) of the palaeocommuties from: The influence of environmental setting on the community ecology of Ediacaran organisms. Please cite this paper if this data if used. 
Type Of Material Database/Collection of data 
Year Produced 2020 
Provided To Others? Yes  
Impact Publication. 
 
Title Data from: A new approach for investigating spatial relationships of ichnofossils: a case study of Ediacaran-Cambrian animal traces 
Description Abstract - Trace fossils record foraging behaviours, the search for resources in patchy environments, of animals in the rock record. Quantification of the strength, density and nature of foraging behaviours enables the investigation of how these may have changed through time. Here, we present a novel approach to explore such patterns using spatial point process analyses to quantify the scale and strength of ichnofossil spatial distributions on horizontal bedding planes. To demonstrate the utility of this approach we use two samples from the terminal Ediacaran Shibantan Member in South China (between 551 and 543 Ma) and the early Cambrian Nagaur Sandstone in northwestern India (between 539 and 509 Ma). We find that ichnotaxa on both surfaces exhibited significant non-homogeneous lateral patterns, with distinct levels of heterogeneity exhibited by different types of trace fossils. In the Shibantan, two ichnotaxa show evidence for mutual positive aggregation over a shared resource, suggesting the ability to focus on optimal resource areas. Trace fossils from the Nagaur Sandstone exhibit more sophisticated foraging behaviour, with greater niche differentiation. Critically, mark correlation functions highlight significant spatial autocorrelation of trace fossil orientations, demonstrating the greater ability of these Cambrian tracemakers to focus on optimal patches. Despite potential limitations, these analyses hint at changes in the development and optimisation of foraging at the Ediacaran-Cambrian transition and highlight the potential of spatial point process analysis to tease apart subtle differences in behaviour in the trace fossil record. 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
URL http://datadryad.org/stash/dataset/doi:10.5061/dryad.wh70rxwqb
 
Title Data from: Bayesian Network Analysis reveals resilience of Aurelia aurita to Irish Sea zooplankton regime shifts 
Description The data for the contemporary jellyfish-zooplankton network were collected over a 2 week cruise in the Irish Sea on the RV Prince Madog in 2008. Zooplankton were collected using horizontally-towed midwater MIK net and vertically hauled ringnets at 144 different stations (Fig. 3). At each station, physical variables were recorded as follows: location, depth, pressure, flow rate (used to calculate volume filtered), estimated sample depth and water depth using a CTD/sonde system. Stations without depth estimates were excluded from analyses because zooplankton counts could not be standardised. Zooplankton were identified and counts per sample were then standardised using the estimated volume of water sampled. The volume of water sampled was calculated as the mean number of revolutions (NR) per minute of the flow meter, multiplied by the volume of the net. If the mean NR was more than one standard deviation outside the stated flowmeter revolutions per minute, these samples were discarded. For analyses, the zooplankton were grouped by biogeographic group following Beaugrand et al. 2001. 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
URL https://figshare.com/articles/dataset/Data_from_Bayesian_Network_Analysis_reveals_resilience_of_Aure...
 
Title Data from: Benthic ecosystem cascade effects in Antarctica using Bayesian network inference 
Description Data from: Benthic ecosystem cascade effects in Antarctica using Bayesian network inference. This data was originally published in Brasier et al. 2018. Brasier, MJ, Grant, SM, Trathan, PN, Allcock, L., Ashford, O., Blagbrough, H., ... & Enderlein, P. (2018). Benthic biodiversity in the South Orkney Islands Southern shelf marine protected area. Biodiversity , 19 (1-2), 5-19. Discretized data for the BNI analyses for the small and large spatial scales. 
Type Of Material Database/Collection of data 
Year Produced 2020 
Provided To Others? Yes  
Impact Publication. 
 
Title Data from:Mortality, population and community dynamics of the glass sponge dominated community "The Forest of the Weird" from the Ridge Seamount, Johnston Atoll, Pacific Ocean. 
Description Data for the above paper. The 2D projection of the abundant specimens from the Forest of the Weird 
Type Of Material Database/Collection of data 
Year Produced 2020 
Provided To Others? Yes  
Impact Data for publication. The 2D projection of the abundant specimens from the Forest of the Weird 
 
Title Pre and Post processing for use with Banjo 
Description Run banjo multiple times bootstrapping the data. 
Type Of Material Data handling & control 
Year Produced 2020 
Provided To Others? Yes  
Impact Multiple papers. 
URL https://github.com/egmitchell/bootstrap
 
Title Vector to Spatial map code 
Description Code for extracting vector co-ordinates from svg files to spatial, dimension and species data. 
Type Of Material Data handling & control 
Year Produced 2020 
Provided To Others? Yes  
Impact Used in multiple publications. 
URL https://github.com/egmitchell/dex
 
Description Leverhulme Research centre for life in the Universe. 
Organisation University of Cambridge
Country United Kingdom 
Sector Academic/University 
PI Contribution I am co-director of this centre. I contributed to the application through the proposal and as part of the interview team.
Collaborator Contribution This is a proposal headed by Prof. Didier Queloz, bringing together people across the University to consider fundamental questions relating to life in the Universe.
Impact We have recieved £10,000,000 which will be used to set up the centre. Of this £9,000,000 will be used for research, awarded on a competitive basis from the steering committee.
Start Year 2021
 
Title Code for A new approach for investigating spatial relationships of ichnofossils: a case study of Ediacaran-Cambrian animal traces 
Description Code to process line segments into spreadsheets. 
Type Of Technology Software 
Year Produced 2022 
Impact Code used for paper to determine new way for analysing trace fossil spatial patterns. 
URL https://www.cambridge.org/core/journals/paleobiology/article/new-approach-for-investigating-spatial-...
 
Title Probabilistic inference code for inferring Benthic ecosystem cascade effects in Antarctica using Bayesian network inference 
Description Code for inferring changes in node state for Bayesian networks, used in the paper Benthic ecosystem cascade effects in Antarctica using Bayesian network inference, Communications Biology. 
Type Of Technology Software 
Year Produced 2020 
Open Source License? Yes  
URL https://zenodo.org/record/3969970
 
Title Probabilistic inference code for inferring Benthic ecosystem cascade effects in Antarctica using Bayesian network inference 
Description Code for inferring changes in node state for Bayesian networks, used in the paper Benthic ecosystem cascade effects in Antarctica using Bayesian network inference, Communications Biology. 
Type Of Technology Software 
Year Produced 2020 
Open Source License? Yes  
URL https://zenodo.org/record/3969969
 
Description Part of a BBC and PBS documentary series 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact I was interviewed for the BBC and PBS series Earth, episode 2: Snowball. My work and I was featured in the final segment "Unlocked Earth's Secrets" which discussed how scientists study Ediacaran organisms which included videos of fieldwork and detailed descriptions of my work. I was also featured on the PBS alongside some of my fossil laser scans. Participating in these documentaries should help to increase peoples knowledge about this time period, and the sort of complex analyses that can be done to understand early animal evolution.
Year(s) Of Engagement Activity 2023
URL https://www.bbc.co.uk/iplayer/episode/p0fpwlny/earth-series-1-2-snowball
 
Description Public talk in Discovery Geopark, Newfoundland, Canada 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact 30 people attended a public talk about my work in one of my fieldwork regions. This was hosted by a local charitable organisation and attended by members of the local government. It increased awareness of the importance of the fossils within the region.
Year(s) Of Engagement Activity 2022