Studentship: Dissecting the polyclonal antibody response to foot-and-mouth disease virus in cattle and buffalo.

Lead Research Organisation: THE PIRBRIGHT INSTITUTE
Department Name: UNLISTED

Abstract

Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.

Technical Summary

Foot-and-mouth disease (FMD) is a highly contagious, acute viral disease of cloven-hoofed, domesticated and wild animals and crucial within the global food security agenda. Despite this, very little is known of the transmission dynamics of the virus in natural hosts (buffalo in Africa), in particular, how FMDV persists in the individual host, and the factors leading to spill-over events from wildlife reservoirs (buffalo) into livestock populations (cattle, pigs, and sheep).This project will determine the genetics underlying the protective immune response to FMDV by exploiting the natural resistance to FMD of the African buffalo (Syncerus caffer). Buffalo and cattle are closely related species that show differential resistance to several diseases including FMD. In cattle and other domestic livestock FMD is characterized by fever, lameness and vesicular lesions of the feet, tongue, snout and teats. In contrast, FMDV infection of African buffalo only causes mild or subclinical disease. Consequently this species is an effective reservoir host of FMDV South African Territories (SAT) 1-3 serotypes and poses considerable problems to livestock farmers and to wildlife conservation. This proposal brings together world-leading expertise in immunology, immunogenetics, virology and epidemiology to examine the genetic basis underlying this species-specific differential disease resistance. As FMDV protection is largely mediated by antibody, we will test the hypothesis that differences in the antibody responses between cattle and buffalo creates differential disease resistance to FMD. This fundamental research will inform future epidemiological studies and direct future vaccination strategies. Specifically, we will determine the differences between the cattle and buffalo immunoglobulin (Ig) heavy chain germline sequences; compare the natural antibody repertoire between cattle and buffalo; and compare the IgG antibody repertoire between cattle and buffalo after FMDV infection.

Planned Impact

unavailable

Publications

10 25 50
publication icon
Schwartz JC (2018) The antibody loci of the domestic goat (Capra hircus). in Immunogenetics

 
Description The B cell locus in the cattle genome has not been well assembled and contains numerous errors. However, to understand how an antibody response is generated we need to understand the potential response the genome can generate, and how this differs during infection and vaccination. We have examined all current genome builds as well as generating our own sequence data to generate bespoke assemblies and determined how the cattle genome is unique and encodes a unique antibody repertoire.
We then used this as a reference to better assemble the publicly available buffalo genome over the antibody loci and compare these to cattle. We are now exploring how this compares with the response in buffalo to FMDV infection and comparing differential responses between the differentially susceptible but closely related species. We have been able to get data from both buffalo and cattle that were naturally infected and vaccinated (respectively) with FMDV. Our analysis showed clearly that there was a fundamental difference in the breadth of the response between these species despite having similar genomic diversity. This now needs to be explored in detail with matched samples as part of a future grant.
Exploitation Route Developing methods to trace B cell responses that lead to vaccine induced protection in cattle. Identify novel ways to target the cattle immune response based on buffalo responses. Develop an understanding of the underlying basis of persistent infection.
Sectors Agriculture

Food and Drink

 
Description Dr Liam Morrison 
Organisation University of Edinburgh
Department The Roslin Institute
Country United Kingdom 
Sector Academic/University 
PI Contribution Analysis is single cattle B cell antibody sequences
Collaborator Contribution Single cattle B cell antibody sequences
Impact None as yet
Start Year 2019
 
Description Rebecca Philp contacted Dr. Brigitte Glanzmann, lead author of "The complete genome sequence of the African buffalo (Syncerus caffer)" to leverage the Illumina sequencing reads. 
Organisation South African Medical Research Centre
Country South Africa 
Sector Public 
PI Contribution Dr. Brigitte Glanzmann sequenced and assembled the African Buffalo genome and was kind enough to share concatenated sequence with us for comparison to our own sequence data. This data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication.
Collaborator Contribution This data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication.
Impact This data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication.
Start Year 2017
 
Description Rebecca Philp contacted Li Ma from the China University of Agriculture after her publication of the cattle heavy chain assembly "Internal duplications of DH, JH and C region genes create an unusual IgH locus in Cattle" to question her on herprotocol. 
Organisation China University of Agriculture
Country China 
Sector Academic/University 
PI Contribution Li Ma was kind enough to share her concatenated sequence with us for comparison to our own sequence data. Both of these data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication on Li Ma's paper.
Collaborator Contribution Li Ma was kind enough to share her concatenated sequence with us for comparison to our own sequence data. Both of these data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication on Li Ma's paper.
Impact Li Ma was kind enough to share her concatenated sequence with us for comparison to our own sequence data. Both of these data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication on Li Ma's paper.
Start Year 2016
 
Description BSI antibody meeting 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Presented work on how we have developed methods to study cattle B cells and antibody responses.
Year(s) Of Engagement Activity 2018
 
Description Rebecca Philp - Cafe Scientific talk "stand up science" Reading 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact Gave a talk on Soil health without the use of slides or props, followed by a debate
Year(s) Of Engagement Activity 2016
 
Description Rebecca Philp - Cafe Scientific talk Basingstoke 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact Gave a presentation and then debate on my internship research on soil health
Year(s) Of Engagement Activity 2016
 
Description Rebecca Philp - Microbiology Quiz 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Postgraduate students
Results and Impact Organized and hosted a Microbiology quiz for teams of postgraduate student at the Institute. The microbiology society sponsored Amazon voucher prizes for the winning team.
Year(s) Of Engagement Activity 2016
 
Description Rebecca Philp - Zoonotic Disease Panel discussion 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact I organized and chaired a panel discussion on zoonotic disease for the Big Biology Day in Cambridge. This involved inviting and hosting several prominent speakers.
Year(s) Of Engagement Activity 2016