Studentship: Dissecting the polyclonal antibody response to foot-and-mouth disease virus in cattle and buffalo.
Lead Research Organisation:
THE PIRBRIGHT INSTITUTE
Department Name: UNLISTED
Abstract
Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.
Technical Summary
Foot-and-mouth disease (FMD) is a highly contagious, acute viral disease of cloven-hoofed, domesticated and wild animals and crucial within the global food security agenda. Despite this, very little is known of the transmission dynamics of the virus in natural hosts (buffalo in Africa), in particular, how FMDV persists in the individual host, and the factors leading to spill-over events from wildlife reservoirs (buffalo) into livestock populations (cattle, pigs, and sheep).This project will determine the genetics underlying the protective immune response to FMDV by exploiting the natural resistance to FMD of the African buffalo (Syncerus caffer). Buffalo and cattle are closely related species that show differential resistance to several diseases including FMD. In cattle and other domestic livestock FMD is characterized by fever, lameness and vesicular lesions of the feet, tongue, snout and teats. In contrast, FMDV infection of African buffalo only causes mild or subclinical disease. Consequently this species is an effective reservoir host of FMDV South African Territories (SAT) 1-3 serotypes and poses considerable problems to livestock farmers and to wildlife conservation. This proposal brings together world-leading expertise in immunology, immunogenetics, virology and epidemiology to examine the genetic basis underlying this species-specific differential disease resistance. As FMDV protection is largely mediated by antibody, we will test the hypothesis that differences in the antibody responses between cattle and buffalo creates differential disease resistance to FMD. This fundamental research will inform future epidemiological studies and direct future vaccination strategies. Specifically, we will determine the differences between the cattle and buffalo immunoglobulin (Ig) heavy chain germline sequences; compare the natural antibody repertoire between cattle and buffalo; and compare the IgG antibody repertoire between cattle and buffalo after FMDV infection.
Planned Impact
unavailable
Publications

Schwartz JC
(2018)
The antibody loci of the domestic goat (Capra hircus).
in Immunogenetics
Description | The B cell locus in the cattle genome has not been well assembled and contains numerous errors. However, to understand how an antibody response is generated we need to understand the potential response the genome can generate, and how this differs during infection and vaccination. We have examined all current genome builds as well as generating our own sequence data to generate bespoke assemblies and determined how the cattle genome is unique and encodes a unique antibody repertoire. We then used this as a reference to better assemble the publicly available buffalo genome over the antibody loci and compare these to cattle. We are now exploring how this compares with the response in buffalo to FMDV infection and comparing differential responses between the differentially susceptible but closely related species. We have been able to get data from both buffalo and cattle that were naturally infected and vaccinated (respectively) with FMDV. Our analysis showed clearly that there was a fundamental difference in the breadth of the response between these species despite having similar genomic diversity. This now needs to be explored in detail with matched samples as part of a future grant. |
Exploitation Route | Developing methods to trace B cell responses that lead to vaccine induced protection in cattle. Identify novel ways to target the cattle immune response based on buffalo responses. Develop an understanding of the underlying basis of persistent infection. |
Sectors | Agriculture Food and Drink |
Description | Dr Liam Morrison |
Organisation | University of Edinburgh |
Department | The Roslin Institute |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Analysis is single cattle B cell antibody sequences |
Collaborator Contribution | Single cattle B cell antibody sequences |
Impact | None as yet |
Start Year | 2019 |
Description | Rebecca Philp contacted Dr. Brigitte Glanzmann, lead author of "The complete genome sequence of the African buffalo (Syncerus caffer)" to leverage the Illumina sequencing reads. |
Organisation | South African Medical Research Centre |
Country | South Africa |
Sector | Public |
PI Contribution | Dr. Brigitte Glanzmann sequenced and assembled the African Buffalo genome and was kind enough to share concatenated sequence with us for comparison to our own sequence data. This data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication. |
Collaborator Contribution | This data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication. |
Impact | This data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication. |
Start Year | 2017 |
Description | Rebecca Philp contacted Li Ma from the China University of Agriculture after her publication of the cattle heavy chain assembly "Internal duplications of DH, JH and C region genes create an unusual IgH locus in Cattle" to question her on herprotocol. |
Organisation | China University of Agriculture |
Country | China |
Sector | Academic/University |
PI Contribution | Li Ma was kind enough to share her concatenated sequence with us for comparison to our own sequence data. Both of these data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication on Li Ma's paper. |
Collaborator Contribution | Li Ma was kind enough to share her concatenated sequence with us for comparison to our own sequence data. Both of these data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication on Li Ma's paper. |
Impact | Li Ma was kind enough to share her concatenated sequence with us for comparison to our own sequence data. Both of these data sharing has enabled me to draft a results chapter of my thesis and will go towards informing a rebuttal publication on Li Ma's paper. |
Start Year | 2016 |
Description | BSI antibody meeting |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Presented work on how we have developed methods to study cattle B cells and antibody responses. |
Year(s) Of Engagement Activity | 2018 |
Description | Rebecca Philp - Cafe Scientific talk "stand up science" Reading |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Public/other audiences |
Results and Impact | Gave a talk on Soil health without the use of slides or props, followed by a debate |
Year(s) Of Engagement Activity | 2016 |
Description | Rebecca Philp - Cafe Scientific talk Basingstoke |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Public/other audiences |
Results and Impact | Gave a presentation and then debate on my internship research on soil health |
Year(s) Of Engagement Activity | 2016 |
Description | Rebecca Philp - Microbiology Quiz |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Postgraduate students |
Results and Impact | Organized and hosted a Microbiology quiz for teams of postgraduate student at the Institute. The microbiology society sponsored Amazon voucher prizes for the winning team. |
Year(s) Of Engagement Activity | 2016 |
Description | Rebecca Philp - Zoonotic Disease Panel discussion |
Form Of Engagement Activity | A formal working group, expert panel or dialogue |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Schools |
Results and Impact | I organized and chaired a panel discussion on zoonotic disease for the Big Biology Day in Cambridge. This involved inviting and hosting several prominent speakers. |
Year(s) Of Engagement Activity | 2016 |