Biotransforming Phenylpropanoids derived from Biorefining: a Toolkit Approach
Lead Research Organisation:
University of York
Department Name: Biology
Abstract
The use of plants as renewable feedstocks to replace petrochemicals requires similar levels of efficiency in terms of refining and recovery of useful products. In biofuel production, which is currently the most advanced refining applied to recover platform chemical from plant biomass, a considerable amount of material is non-fermentable and remains as a low value by-product at the end of the process. Fractionating this residue and adding value to its components would enhance the efficiency economics and ultimately sustainability of biorefining. One relatively abundant and easily recoverable chemical in the non-fermented material is the secondary metabolite ferulic acid, a phenylpropanoid (PP) used extensively in plants for making biologically active polyphenolic compounds. In this project we propose to use ferulic acid and other PPs as precursors to produce dihydrochalcones and their glycosylated derivatives through fermentation in metabolically engineered yeast. These dihydrochalcones are widely used as artificial sweetners and flavour masking agents in the food industry and are currently made by non-chemical transformation methods. In our process, we will reconstruct pathways which function to produce polyphenolics in plants and engineer them into yeast, which on feeding with PPs will then produce these artificial flavouring agents through a sustainable biological process. As artificial flavouring agents, the use of genetic modification to produce these compounds will not affect their market value, as they are not 'natural' products. Furthermore, the modular assembly of our engineered pathway and the feeding of specific PP pre-cursors gives us the potential to produce novel dihydrochalcones which have the potential to be developed into new flavour enhancing products for the food industry. The programme therefore will therefore add value to existing fermentation processes which utilise plant material. In addition the process would also be highly compatible with processes aimed at deconstructing lignin, which is a major non-fermentable product derived from woody biomass composed of PP intermediates. Thus the project is both of immediate utility and establishes useful technologies of longer term value to the biorefining industries which have identified lignin deconstruction and the use of the respective products as a major future commercial opportunity.
Technical Summary
Phenylpropanoids (PPs) are metabolites found in all terrestrial plants which are used in nature to make a range of polyphenolic compounds, with dietary functions as flavourings and antioxidants. In this project, we propose to copy the pathways which exist in nature and take PPs left over as low value by products of biofuel and plant fibre production and biotransform them into high value polyphenolic intermediates of value to the food industry. The biosynthetic process proposed would be assembled in yeast , using enzyme pathways which can be assembled together in a modular manner to generate a wide range of end products from the limited range of PPs available from biorefining. To illustrate the technology, we will generate glycosylated dihydrochalcones which are 100s of time sweeter than sucrose and already extensively marketed as artificial flavour enhancers. While our process will use renewable feedstock and biological processing, currently the synthesis of such compounds requires non-sustainable chemical transformations. In terms of novelty, our programme has the capability of generating end products derived from PPs which have not been described in nature , but which based on chemical precedence would have a strong liklihood of being biologically active as flavourings or neutraceuticals. Therefore in addition to providing an alternative route to existing successful products, through using a modular approach for metabolic engineering we have the potential to generate new market leading products in the future. The proposed process involves a series of individual enzyme steps , each of which serves as a biotransformation module (BM), which can then be linked to the next biosynthetic step to produce the compounds of interest. These BMs will be co-ordinately expressed in different combinations using polyprotein expression technology, essentially enabling the directed reconstruction of plant secondary metabolic pathways in yeast.
Planned Impact
The groupings who will benefit from the work have been identified as 1. UK industry, notably in companies developing biorefining and more broadly in the industrial biotechnology sector. By deriving high value products from waste streams, the biofuels companies would be able to add value to existing processes with minimal disruption. In addition, the production of high value fine chemicals by a biotechnological route has the potential to generate new businesses in fine chemicals production which could physically cluster with large scale fermentation. Importantly, as these food additives will be entering a market dominated by synthetic compounds, their origins through the genetic modification of yeast will not have the same negative connotations with end users or the regulatory bodies as would be the case if they were supplanting plant derived natural products. As part of a BBSRC industry club, the project would immediately benefit from the close links with its membership of private companies and dissemination agreement. The PI also has close links with the industrial sector outside the club and continues to work with the Bioscience knowledge transfer network . There is therefore excellent scope for the work to be brought to the attention of the private sector. 2. The region's economy, through the commercialisation of the process or the licensing of the patented technology to a third party. With other on-going projects, the programme offers a long term potential to establish a spin out in industrial biotechnology and fine chemicals manufacture to be located in the region. As an alternative strategy the work will be patented and the IP licensed to generate wealth for the University and region. 3. Schools and public engagement. The concept of the biofactory, using living cells to produce chemicals from sustainable sources is an inspirational example of the power of biotechnology and offers a simple entry level into the science for school teachers and children. Similarly, the message is also readily understandable to a 'science hungry' general public who want to find out more of the research work going on in the University. Dissemination to the schools will be via the teachers in clustered in Science Learning Centres and to the school children through Academies and the Science in to Schools programme where staff and students go out into local schools and through the COMPACT scheme where the children get experience of working in the University labs. Engagement with the general public is organized through a public lecture series and most recently through the Institute of Advanced Studies, which holds debating classes around contemporary issues. The PI is particularly interested in developing best practice in ELSIs and as such is a member of the cross research council oversight group for public dialogue on synthetic biology.
Organisations
Publications
Ahmad L
(2017)
Structural evidence for Arabidopsis glutathione transferase AtGSTF2 functioning as a transporter of small organic ligands.
in FEBS open bio
Brazier-Hicks M
(2013)
Metabolic engineering of the flavone-C-glycoside pathway using polyprotein technology.
in Metabolic engineering
Brazier-Hicks M
(2018)
Substrate specificity and safener inducibility of the plant UDP-glucose-dependent family 1 glycosyltransferase super-family.
in Plant biotechnology journal
Fesenko E
(2014)
Plant synthetic biology: a new platform for industrial biotechnology.
in Journal of experimental botany
Jenkins T
(2011)
Plants: biofactories for a sustainable future?
in Philosophical transactions. Series A, Mathematical, physical, and engineering sciences
Robert Edwards (Author)
(2012)
MERGER OF PRIMARY AND SECONDARY METABOLISM
in Pharmaceutical biology
Description | This project met all its technical objectives and has allowed us to make natural products that are of interest to the food industry as high value sweetners using a sustainable bio-based process. Our current research interests are focussed around the biotransformation of synthetic compounds and natural products in plants and the manipulation of these pathways for applications in crop protection and biorefining using technologies including synthetic biology. We became involved in the IBTI Club through my role as science lead at the Bioscience for Business Knowledge Transfer Network (KTN) but had not undertaken any specific research directly related to biorefining prior to this project. Adding value to the by-products of biofuel and biobased products production is important for the economic viability of a biorefinery operation. For example, the non-fermented residue from bioethanol production contains significant quantities of extractable chemicals including phenylpropanoids such as ferulic acid. Through the IBTI project the Edwards group demonstrated how they could be transformed into high-value polyphenolic intermediates of interest to the food industry as new flavour enhancing products. This was achieved by assembling a multienzyme biosynthetic pathway in the yeast species Saccharomyces cerevisiae, then using the engineered yeast to ferment phenyl propanoids to produce interesting food ingredients including dihydrochalcones, widely used as artificial sweeteners and flavour masking agents. The IBTI club has enabled Edwards to dedicate part of his research to a work programme in the field of biotechnology and helped create several academic and industrial contacts within the field. The IBTI club has also influenced the direction of our research group, notably through the use of polyprotein technology develop in the IBTI project in further yeast engineering prograrmmes. In particular, polyproteins have been used to characterise herbicide detoxification pathway enzymes from crops and weeds using yeast expression systems. This has resulted in further major funding from Syngenta to study herbicide selectivity mechanisms (£350k). |
Exploitation Route | The development of a reliable and efficient means to express multiple proteins simultaneously in a variety of eukaryotic hosts is a major advance in metabolic engineering and has formed the basis of a new major collaboration and long term relationship with Syngenta, where we are building multi-enzyme detoxification systems from plants in yeast. This platform is a valuable addition to the technology available to Syngenta to develop new generations of safe and effective pesticides. |
Sectors | Agriculture Food and Drink Chemicals |
Description | The outputs of this project with respect to the use of polyprotein technology to produce sweeteners has been picked up as a technology of interest to Pepsico via UKTI. As a result of a presentation, we were then approached by Syngenta to establish a collaboration using the polyprotein technology to express and screen members of the cytochrome P450 family from crops and weeds in yeast using the technology we hav=d developed as part of this project. This work continues until July 2018. |
First Year Of Impact | 2014 |
Sector | Agriculture, Food and Drink |
Impact Types | Economic |
Description | Syngenta Innovation Award ' Identification, expression and induction of P450 enzymes involved in herbicide selectivity' |
Amount | £350,000 (GBP) |
Organisation | Syngenta International AG |
Department | Syngenta Crop Protection |
Sector | Private |
Country | United Kingdom |
Start | 05/2015 |
End | 07/2018 |
Description | Debate (Royal Institution) |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Public/other audiences |
Results and Impact | Panellist and speaker at Royal Society of Biology hosted event 'Debate on Synthetic Biology' , Royal Institution, London 13th October 2015. Presented the view of engineering food for future health benefits |
Year(s) Of Engagement Activity | 2015 |
Description | Debate on Synthetic Biology |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Public/other audiences |
Results and Impact | Invited speaker at annual debate of the the Linnean Society jointly organised with the London Evolutionary Research Network, Linnean Society, Bulington House, London 19th April 2018. |
Year(s) Of Engagement Activity | 2018 |
Description | International Workshop (Hanoi) |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Invited speaker at UK-Vietnam Research Links workshop 'Innovation in Chemical Engineering for Sustainable Environments', Hanoi 9th -14th March, 2015. Presented outcomes of IBTI proposal that has led to a biorefining collaboration with VAST |
Year(s) Of Engagement Activity | 2015 |
Description | Invited speaker Institute of Food Science and Technology Launch Pad event, Fera, 27th November 2015. |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Industry/Business |
Results and Impact | This was an IFST event reviewing the latest developments in food technology and associated safety which was well attended by leading UK food companies and the FSA. there was considerable interest in applications for synthetic biology in food production. |
Year(s) Of Engagement Activity | 2015 |
Description | Invited speaker, BBSRC Integrated biorefining research and technology club 'Biotransforming phenylpropanids derived from biorefining, Royal York Hotel, York, 27th November 2015. |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Thus was a wrap up IBTI workshop looking at the final outputs of the programme end game a useful overview to the industry sponsors |
Year(s) Of Engagement Activity | 2015 |
Description | Plenary speaker at British Nutrition Foundation 50th anniversary conference 'Who is shaping the food choices of the future ?'. St Thomas' Hospital, London 12th October. |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | The presentation was hosted by the British Nutrition Foundation as a forward look at future food production and the effect on consumer health, The meeting was well attended by academics, industrialist and some policy facing practitioners. The event gave useful insight to nutritionists on agricultural innovation. |
Year(s) Of Engagement Activity | 2017 |
Description | Plenary speaker, at Session 'Signalling, Cellular Trafficking and Systems Biology' Plant Biotechnology Denmark, University of Copenhagen, 1st February 2017. |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Invited talk on the potential of biorefining and synthetic biology in food production |
Year(s) Of Engagement Activity | 2017 |
Description | Synthetic Biology Conference |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Plenary speaker Global Engage 2nd Synthetic Biology Congress, London 20-21st October, 'Roles for Synthetic Biology in Sustainable Agriculture' Opportunity to network with industry sponsors |
Year(s) Of Engagement Activity | 2015 |