Parallel pathways for representing temporal sensory information
Lead Research Organisation:
University of Manchester
Department Name: Life Sciences
Abstract
Being nocturnal, rodents rely to a large extent on their whiskers to sense the precise nature of the environment, and the resolution of the system is impressive: using its whiskers, a blind-folded rat can discriminate between objects that differ only in micron-scale surface texture. Since it is well-established that different sensory systems in different mammals have profound similarities, studying the rats whiskers can offer important insight into general questions about the mechanisms of sensation in the brain. When a rat is exploring an object, it sweeps its whiskers back and forth across the surface around 10 times per second. This causes the whiskers to vibrate. These vibrations are known as 'micromotions' and they are important, since it is because different objects evoke different micromotions that the rat is able to tell them apart. A key implication is that a critical function of neurons in the rat's brain is to represent and process whisker motion. But how this happens is not fully understood. In my laboratory, we have recently made progress in understanding how the thalamus - a vital control centre for all the senses - represents whisker motion. Whereas previously it was thought that neurons in the thalamus all respond in the same way to a whisker stimulus, we unexpectedly found diversity. This new discovery opens up many new questions, including: Where in the brain does this diversity originate? Are neurons of different types located in different parts of the thalamus? Are there corresponding types of neuron in the cerebral cortex - a key brain structure, which is the next level after the thalamus in the brain's sensory circuit. In this project, we seek to answer these questions. The wider significance of the research is that it will contribute new insight into sensory systems and how sensory information is processed.
Technical Summary
The platform for this proposal is new findings from my lab (Petersen et al., Neuron, in press) which unexpectedly show that neurons in the whisker thalamic relay nucleus represent diverse kinetic features of whisker motion (position, velocity and others). This suggests a new view of sensory processing: that the whisker system consists of parallel channels, specialised for conveying different types of temporal information. It is still unknown what is the origin of these channels, and what their anatomical basis is in the pathways from the ventro-posterior medial and posterior medial nuclei of thalamus to barrel cortex. This project seeks to answer these questions. I propose to do this by a novel combination of methods. To identify the sensory features that neurons encode, we will use electrophysiological recording in conjunction with a novel reverse correlation approach. This is a new computational technique, with which it is possible to determine the sensory features that neurons in the whisker system represent in a systematic fashion that was not previously possible. To identify the anatomical location of these neurons, we will use juxtacellular recording and single-cell labelling with biocytin, in conjunction with cytochrome oxidase histochemistry.
Organisations
People |
ORCID iD |
Rasmus Petersen (Principal Investigator) |
Publications
Bale M
(2015)
Microsecond-Scale Timing Precision in Rodent Trigeminal Primary Afferents
in The Journal of Neuroscience
Bale MR
(2015)
Efficient population coding of naturalistic whisker motion in the ventro-posterior medial thalamus based on precise spike timing.
in Frontiers in neural circuits
Bale MR
(2013)
Low-dimensional sensory feature representation by trigeminal primary afferents.
in The Journal of neuroscience : the official journal of the Society for Neuroscience
Bale MR
(2009)
Transformation in the neural code for whisker deflection direction along the lemniscal pathway.
in Journal of neurophysiology
Gruen, Sonia; Rotter, Stefan
(2010)
Analysis of Parallel Spike Trains
Hoare DJ
(2011)
Modeling peripheral olfactory coding in Drosophila larvae.
in PloS one
Ince RA
(2009)
Python for information theoretic analysis of neural data.
in Frontiers in neuroinformatics
Ince RA
(2010)
Open source tools for the information theoretic analysis of neural data.
in Frontiers in neuroscience
Maravall M
(2013)
Transformation of adaptation and gain rescaling along the whisker sensory pathway.
in PloS one
Petersen RS
(2009)
Neural coding and contextual influences in the whisker system.
in Biological cybernetics
Description | In any sensory system, the primary afferents constitute the first level of sensory representation and fundamentally constrain all subsequent information processing. Our main discovery was to show that the spike timing, reliability and stimulus selectivity of primary afferents in the whisker system can be accurately described by a simple model, consisting of linear stimulus filtering combined with spike feedback. This is substantial progress towards the aim of understanding the input the senses provide to the brain under natural conditions. |
Exploitation Route | The findings constitute (1) a baseline for which the effect of peripheral neuropathies can be assessed and (2) fundamental data to guide construction of robots with an effective somatosensory system. |
Sectors | Aerospace Defence and Marine Digital/Communication/Information Technologies (including Software) Electronics Healthcare |
URL | http://www.petersenlab.ls.manchester.ac.uk/ |
Description | Active Touch: A Novel Computational-Electrophysiological Approach |
Amount | £20,000 (GBP) |
Organisation | Weizmann Institute of Science |
Sector | Academic/University |
Country | Israel |
Start | 07/2012 |
End | 07/2013 |
Description | Collective neural computation in the whisker thalamus |
Amount | £19,020 (GBP) |
Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
Sector | Public |
Country | United Kingdom |
Start | 09/2010 |
End | 09/2012 |
Description | Experience-dependent plasticity of the peripheral olfactory code |
Amount | £595,301 (GBP) |
Funding ID | BB/H009914/1 |
Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
Sector | Public |
Country | United Kingdom |
Start | 01/2010 |
End | 12/2012 |
Description | The contribution of inner retinal photoreception to mouse visual function |
Amount | £500,207 (GBP) |
Funding ID | BB/I007296/1 |
Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
Sector | Public |
Country | United Kingdom |
Start | 03/2011 |
End | 02/2014 |
Description | Junk the Jargon event |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Public/other audiences |
Results and Impact | Communication of scientific projects in engaging, jargon-free manner. PDRA MRB was a finalist in the event. |
Year(s) Of Engagement Activity | 2014 |
Description | MRC Max Perutz Science Writing Prize |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Media (as a channel to the public) |
Results and Impact | PhD student OF won this award for communication of his PhD work on diabetic neuropathy. |
Year(s) Of Engagement Activity | 2013 |
URL | https://www.mrc.ac.uk/skills-careers/studentships/for-current-mrc-students/max-perutz-science-writin... |
Description | Pint of Science festival |
Form Of Engagement Activity | A formal working group, expert panel or dialogue |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Public/other audiences |
Results and Impact | Communication of neuroscience by informal, lively talk in local pubs. |
Year(s) Of Engagement Activity | 2014,2016 |