Enzyme e-map - Modernising Electrochemical Enzymology To Map Electron Transfer
Lead Research Organisation:
University of York
Department Name: Chemistry
Abstract
In Nature the production of hydrogen and methane fuel molecules from readily available starting materials such as water and carbon
dioxide is achieved selectively, efficiently and rapidly by electrocatalytic redox-metalloenzymes containing non-precious transition
metal active sites. The outstanding recent scientific advances made in molecular biology have made the development of biofuel
technologies based on these enzymes a reality, but such applications require a complementary toolkit of physical chemistry methods
that can dissect how DNA sequence and protein structure relates to function. Classic bio-electrochemistry methods developed in the
1980s have been a powerful way to probe the active site reactivity of such enzymes, but they have been unable to map the electron
transfer processes which underpin the catalysis. Therefore, we have been limited to a narrowly active-site focussed view of enzyme
mechanism. This project will transform the state of the art in bio-electrochemistry to deliver a powerful new technique that can "see"
the electron-transfer processes of the highly evolved and essential electron-transfer reaction centres in redox-enzymes, and deconvolute
their role in electrocatalysis. This will be achieved by deploying advanced computational methods to integrate intelligent
experimental design into electrochemistry to develop a methodology that lets us separate and accurately model the electron transfer
processes of an enzyme bound to substrate, and chemical biology methods to develop linker molecules for light-activated electrografting
of proteins and enzymes onto electrodes. We will showcase the power of this new electrochemical enzymology toolkit by
conducting previously impossible hypothesis-led investigations and enzyme-discovery projects into i) cellulose-degrading LPMOs
that play a crucial role in biorefinery enzyme cocktails and ii) hydrogenases, Ni+Fe or Fe-only metalloenzymes that are as rapid and
efficient at hydrogen-catalysis as platinum.
dioxide is achieved selectively, efficiently and rapidly by electrocatalytic redox-metalloenzymes containing non-precious transition
metal active sites. The outstanding recent scientific advances made in molecular biology have made the development of biofuel
technologies based on these enzymes a reality, but such applications require a complementary toolkit of physical chemistry methods
that can dissect how DNA sequence and protein structure relates to function. Classic bio-electrochemistry methods developed in the
1980s have been a powerful way to probe the active site reactivity of such enzymes, but they have been unable to map the electron
transfer processes which underpin the catalysis. Therefore, we have been limited to a narrowly active-site focussed view of enzyme
mechanism. This project will transform the state of the art in bio-electrochemistry to deliver a powerful new technique that can "see"
the electron-transfer processes of the highly evolved and essential electron-transfer reaction centres in redox-enzymes, and deconvolute
their role in electrocatalysis. This will be achieved by deploying advanced computational methods to integrate intelligent
experimental design into electrochemistry to develop a methodology that lets us separate and accurately model the electron transfer
processes of an enzyme bound to substrate, and chemical biology methods to develop linker molecules for light-activated electrografting
of proteins and enzymes onto electrodes. We will showcase the power of this new electrochemical enzymology toolkit by
conducting previously impossible hypothesis-led investigations and enzyme-discovery projects into i) cellulose-degrading LPMOs
that play a crucial role in biorefinery enzyme cocktails and ii) hydrogenases, Ni+Fe or Fe-only metalloenzymes that are as rapid and
efficient at hydrogen-catalysis as platinum.
Organisations
People |
ORCID iD |
Alison Parkin (Principal Investigator) |
Publications
Baranska N
(2024)
Practical Guide to Large Amplitude Fourier-Transformed Alternating Current Voltammetry-What, How, and Why
in ACS Measurement Science Au
Lloyd-Laney H
(2023)
Recovering biological electron transfer reaction parameters from multiple protein film voltammetric techniques informed by Bayesian inference
in Journal of Electroanalytical Chemistry
Yates NDJ
(2024)
Crossing the Solubility Rubicon: 15-Crown-5 Facilitates the Preparation of Water-Soluble Sulfo-NHS Esters in Organic Solvents.
in Bioconjugate chemistry
Yates NDJ
(2023)
Site-Selective Aryl Diazonium Installation onto Protein Surfaces at Neutral pH using a Maleimide-Functionalized Triazabutadiene.
in Chembiochem : a European journal of chemical biology