Understanding the regulation of Polycomb Repressor Complex 1 and its role in epigenetic control of gene expression
Lead Research Organisation:
Babraham Institute
Department Name: UNLISTED
Abstract
Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.
Technical Summary
Cells, the basic unit of all mammals, contain all the information for cell survival and proliferation, which are highly regulated processes. One regulatory mechanism is the expression of specific proteins. Different proteins are encoded from unique DNA sequences known as genes. DNA is packaged into chromatin using a complex made up of histones, providing a further level of regulation on top of DNA sequence. Chromatin can be modified to regulate gene expression and therefore protein levels in the cell. One complex of proteins that is known to modify chromatin is called the polycomb complex PRC1. PRC1 is able to modify a histone and this is associated with gene repression. The PRC1 complex has been shown to play an important role in cell survival and proliferation, through its ability to modify chromatin. How the PRC1 complex is regulated and how it is able to recognise chromatin to modify it is poorly understood. The work described in this proposal is aimed at elucidating how PRC1 is regulated and in turn how this regulates gene expression to maintain healthy cells.
Planned Impact
unavailable
People |
ORCID iD |
| Len Stephens (Principal Investigator) |
Publications
Schoenfelder S
(2015)
Polycomb repressive complex PRC1 spatially constrains the mouse embryonic stem cell genome.
in Nature genetics
Cooper S
(2014)
Targeting polycomb to pericentric heterochromatin in embryonic stem cells reveals a role for H2AK119u1 in PRC2 recruitment.
in Cell reports
Maertens GN
(2010)
Ubiquitin-specific proteases 7 and 11 modulate Polycomb regulation of the INK4a tumour suppressor.
in The EMBO journal
| Description | We showed how a key protein complex PRC1 is recruited to chromatin to regulate how the chromatin is organised to regulate gene expression in embryonic stem cells we have shown how this complex is regulated by signalling pathways from environmental cues. |
| Exploitation Route | these are basic mechanistic finding of how a key protein complex functions, this complex is miss-regulated during development, in ageing and in multiple cancers. Our data can be utilised by other who will use these finding to potentially develop stem cell therapies, and drug treatments. |
| Sectors | Education Healthcare Pharmaceuticals and Medical Biotechnology |
| Title | promoter capture Hi-C |
| Description | It contains genome wide chromatin interactions from mouse embryonic stem cells |
| Type Of Material | Database/Collection of data |
| Year Produced | 2014 |
| Provided To Others? | Yes |
| Impact | This will provide a resource for other members of the scientific community |
| Description | Role of Polycomb repressive complexes in nuclear organisation |
| Organisation | EMBL European Bioinformatics Institute (EMBL - EBI) |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | We provided promoter capture Hi-C Next sequencing data |
| Collaborator Contribution | Our collaborator has analysed our Hi-C next generation sequencing data |
| Impact | This work will be published in a peer review journal. This is multi-disciplinary and involved Stem cell research and bioinformatics |
| Start Year | 2011 |
| Description | Understanding recruitment of Polycomb repressive complexes |
| Organisation | University of Oxford |
| Department | Department of Biochemistry |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Research results based on mass spectrometry |
| Collaborator Contribution | Research results on ChIP-seq |
| Impact | doi: 10.1016/j.celrep.2014.04.012 doi: 10.1016/j.cell.2011.12.029 |
| Start Year | 2010 |
| Description | Functional role of PRC1 recruitment in embryonic stem cells |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | presented a poster at a scientific conference and stimulated discussions with other scientific researchers NA |
| Year(s) Of Engagement Activity | 2012 |
| Description | Schools day |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | School children were engaged in science Members of the group reported back that the project was excellent and that it had made them very interested in research biology |
| Year(s) Of Engagement Activity | 2010,2011,2012,2014 |
| Description | visit to special needs school |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | Gave a talk to a class of children with learning difficulties on the fun aspects of science After my talk the children were engaged in science activities more. |
| Year(s) Of Engagement Activity | 2012 |