Functional Analysis of the Plant Vacuolar Proton-Pumping Pyrophosphatase
Lead Research Organisation:
John Innes Centre
Department Name: UNLISTED
Abstract
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Technical Summary
Plant vacuolar membranes are unusual in containing two classes of proton pump: an ATPase (V-ATPase) and an inorganic pyrophosphatase (V-PPase). While the V-ATPase is ubiquitous among eukaryotes, the V-PPase is restricted in its distribution to plants, some photosynthetic bacteria and a few members of the Archaea. Vacuolar proton pumps are known to acidify the vacuolar lumen, thereby generating the protonmotive force (PMF) required for proton-coupled transport of solutes into the vacuole via antiporters.
In Arabidopsis, a family of three AVP genes encodes V-PPases. We have shown in avp1 mutants that PPi-driven proton currents are completely absent at the vacuoles of many cell types. [AVP2 is known to be Golgi-localised, while expression of AVP3 is limited to pollen.] The phenotype of avp1 mutants is subtle under nutritionally-replete conditions. However, mutants are hypersensitive to salinity. Surprisingly, this sensitivity relates to chloride ions rather than to sodium. In accord with the notion that a V-PPase-generated PMF might play a critical role in anion accumulation in vacuoles, avp1 mutants are also exhibit a marked phenotype if nitrogen is supplied as nitrate rather than ammonium.
Future work will address the mechanistic basis of the role of the V-PPase in anion nutrition through measurement of vacuolar pH in vivo with ion-selective electrodes.
In Arabidopsis, a family of three AVP genes encodes V-PPases. We have shown in avp1 mutants that PPi-driven proton currents are completely absent at the vacuoles of many cell types. [AVP2 is known to be Golgi-localised, while expression of AVP3 is limited to pollen.] The phenotype of avp1 mutants is subtle under nutritionally-replete conditions. However, mutants are hypersensitive to salinity. Surprisingly, this sensitivity relates to chloride ions rather than to sodium. In accord with the notion that a V-PPase-generated PMF might play a critical role in anion accumulation in vacuoles, avp1 mutants are also exhibit a marked phenotype if nitrogen is supplied as nitrate rather than ammonium.
Future work will address the mechanistic basis of the role of the V-PPase in anion nutrition through measurement of vacuolar pH in vivo with ion-selective electrodes.
Planned Impact
unavailable
Organisations
People |
ORCID iD |
| Dale Sanders (Principal Investigator) |
Publications
Besse M
(2011)
Developmental pattern of aquaporin expression in barley (Hordeum vulgare L.) leaves.
in Journal of experimental botany
Borrill P
(2014)
Biofortification of wheat grain with iron and zinc: integrating novel genomic resources and knowledge from model crops.
in Frontiers in plant science
Chapman N
(2011)
Water supply and not nitrate concentration determines primary root growth in Arabidopsis.
in Plant, cell & environment
Dodd AN
(2010)
The language of calcium signaling.
in Annual review of plant biology
Fan X
(2016)
Overexpression of a pH-sensitive nitrate transporter in rice increases crop yields.
in Proceedings of the National Academy of Sciences of the United States of America
Feng H
(2013)
Optimizing plant transporter expression in Xenopus oocytes.
in Plant methods
Hu R
(2016)
Knock-Down of a Tonoplast Localized Low-Affinity Nitrate Transporter OsNPF7.2 Affects Rice Growth under High Nitrate Supply.
in Frontiers in plant science
Kavitha PG
(2012)
Rice cultivars with differing salt tolerance contain similar cation channels in their root cells.
in Journal of experimental botany
Patron NJ
(2015)
Standards for plant synthetic biology: a common syntax for exchange of DNA parts.
in The New phytologist
| Description | The plant cell vacuole has two proton pumps that are important for energizing the transport systems. The specific role of one of these pumps, the proton-pumping pyrophosphatase in vacuolar function is being characterised. The vacuolar proton pumping pyrophosphates has a particular role is energizing the vacuolar storage of nitrate. This role is important for crop nitrogen use efficiency as stored nitrate can be subsequently be remobilized and used for growth by the plant. |
| Exploitation Route | Many commercailly important processes in plants depend on the function of the vacuole. For example, when supplied in excess nutrients can be stored in the vacuole and this process has important consequences for fertiliser use efficiency. |
| Sectors | Agriculture Food and Drink Environment |
| Description | The role of this important vacuole pump in crop nutrient use efficiency has been shown. The vacuolar pyrophosphatase can energise the storage of important plant products. The vacuolar storage of nitrate is important for crop NUE and is particularly energised by this membrane proton pump. |
| First Year Of Impact | 2008 |
| Sector | Agriculture, Food and Drink,Environment |
| Impact Types | Societal Economic |
| Description | CEPAMS Symposium Shanghai 2016 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | CEPAMS Symposium Shanghai 2016 Friday 18th March Editing Long Distance Transport and Storage to Optimize the Site of Nitrogen Assimilation in Drought and Salt-stress |
| Year(s) Of Engagement Activity | 2016 |
| Description | International Symposium on Plant Membrane Biology, Annapolis MD, USA |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | International Symposium on Plant Membrane Biology, Annapolis MD, 2016 Thursday 9th June 2016 S16 Future Perspectives |
| Year(s) Of Engagement Activity | 2016 |
| Description | Invited Seminar at Bristol University |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited seminar speaker at Bristol University - title 'The Plant Lytic Vacuole: Space-Filler, Garbage Bag, or Something More Interesting?' |
| Year(s) Of Engagement Activity | 2017 |
| Description | Invited Seminar at SIPPE Shanghai Institute of Plant Physiology and Ecology |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Professional Practitioners |
| Results and Impact | 4th November 2016 in Shanghai 15:00 Invited Seminar at SIPPE Shanghai Institute of Plant Physiology and Ecology |
| Year(s) Of Engagement Activity | 2016 |
| Description | Invited seminar speaker Padua Italy (12th January 2016) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Presentation on the role of the plant lytic vacuole. Title: Lytic Vacuole: Space-Filler, Garbage Bag, or Something More Interesting? |
| Year(s) Of Engagement Activity | 2016 |
| Description | Invited seminar speaker Plant Sciences Univiersity of Oxford, UK (January 28 th 2016) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited Departmental seminar speaker. Topic was the role of the lytic vacuole. Title: The Plant Lytic Vacuole: Space-Filler, Garbage Bag, or Something More Interesting? |
| Year(s) Of Engagement Activity | 2016 |
| Description | Invited speaker at SEB Plant Transport Group Meeting Glasgow 2014 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited presentation on the functional role of the vacuole proton pumping pyrophosphatase. |
| Year(s) Of Engagement Activity | 2014 |
| Description | Invited speaker at York University |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited speaker to York University: Plant Biology Seminar - The Plant Lytic Vacuole: Space-Filler, Garbage Bag, or Something More Interesting? |
| Year(s) Of Engagement Activity | 2017 |
| Description | Invited speaker: Gordon Research Conference on Organellar Channels and Transporters |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited speaker: Gordon Research Conference on Organellar Channels and Transporters Gordon Research Conference on Organellar Channels and Transporters |
| Year(s) Of Engagement Activity | 2017 |
| Description | Keynote Speech: Plants and Human Health at the Wellcome Trust China-UK Life Science Summit |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Keynote Speech: Plants and Human Health at the Wellcome Trust China-UK Life Science Summit |
| Year(s) Of Engagement Activity | 2017 |
| Description | Member of the UK Science Partnership for Animal and Plant Health |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Member of the UK Science Partnership for Animal and Plant Health - quarterly meetings are held |
| Year(s) Of Engagement Activity | 2017 |
| Description | New Phytologist Next Generation Scientists meeting - Open Address |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Opening Address at New Phytologist Next Generation Scientists meeting - Scientific meeting |
| Year(s) Of Engagement Activity | 2017 |
| Description | Nourishing ten billion sustainably: resilient food production in a time of climate change |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | CLIMATE CHANGE : SCIENCE AND SOLUTIONS | BRIEFING 10 The global food system accounts for around one third of greenhouse gas (GHG) emissions generated by human activity. It therefore offers a major opportunity for progress towards net zero if emissions can be reduced at the same time as delivering food security and building resilience to the inevitable impacts of climate change. Research shows how solutions can be found in diet change, respectfully approached, sustainable agricultural practices and harnessing the continuing wave of innovation in food biotechnology |
| Year(s) Of Engagement Activity | 2021 |
| URL | https://royalsociety.org/-/media/policy/projects/climate-change-science-solutions/climate-science-so... |
| Description | Opening address at Breeders Day |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Industry/Business |
| Results and Impact | Opening address at Breeders Day at the John Innes Centre |
| Year(s) Of Engagement Activity | 2017 |
| Description | Panel Meeting of Severo Ochoa and Maria de Maeztu Committee - Madrid, Spain |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Professional Practitioners |
| Results and Impact | Panel Meeting of Severo Ochoa and Maria de Maeztu Committee - Madrid, Spain |
| Year(s) Of Engagement Activity | 2017 |
| Description | Royal Society fact finding visit to Beijing |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Royal Society fact finding visit to Beijing, 22 to 26 October for Royal Society's genetic technologies programme |
| Year(s) Of Engagement Activity | 2017 |
| Description | Salt & Water Stress in Plants - Gordon conference presentation Hong Kong |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Report research to the scientific community |
| Year(s) Of Engagement Activity | 2012 |
| URL | http://www.grc.org/programs.aspx?year=2012&program=salt |
| Description | Scientific Advisory Board Member for Max PIanck Institute of Molecular Plant Physiology, Golm, Germany |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Scientific Advisory Board Meeting for Max PIanck Institute of Molecular Plant Physiology |
| Year(s) Of Engagement Activity | 2017 |
| Description | University of Geneva - PhD Retreat |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Postgraduate students |
| Results and Impact | University of Geneva - PhD Retreat, participation in a debate: " Technological advances - A new chance for changing public perception on GMOs". Also speaker title: 'The plant lytic vacuole: space-filler, garbage bag, or something more interesting'. A two-day retreat for PhD students in molecular plant sciences at universities in French-speaking Switzerland. |
| Year(s) Of Engagement Activity | 2017 |
| Description | World Life Science Conference (Sustainable Agriculture Session), Beijing, 2016 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | World Life Science Conference (Sustainable Agriculture Session), Beijing, 2016 3rd November 2016, Session 48 Sustainable Agriculture - Membrane Transporters and Nutrition - from crops to people |
| Year(s) Of Engagement Activity | 2016 |
| Description | World Life Science Conference (Sustainable Agriculture Session), Beijing, 2018 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | China National Convention Center presentation: The Plant Vacuole: Roles in Plant and Human Nutrition, and Cellular Signaling 27th - 29th October 2018 |
| Year(s) Of Engagement Activity | 2018 |