Role of the paxillin/poly(A)-binding protein 1 complex in mRNA trafficking during cell migration

Lead Research Organisation: University of Liverpool
Department Name: Sch of Biological Sciences

Abstract

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Technical Summary

During cell migration the adaptor protein, paxillin, is recruited to integrin complexes at the cell's leading edge and is thought to be involved in positioning multiprotein complexes that are key to the maintenance of polarity during cell migration. One of the mechanisms by which cells generate and maintain polarity is by trafficking and localising mRNA transcripts to particular subcellular locations, and it is therefore of interest that we have recently identified poly(A)-binding protein 1 (PABP1) as a novel ligand for paxillin. PABP1 associates with paxillin with high affinity, and the resulting complex shuttles in and out of the nucleus and localises to the leading edge of migrating cells. In preliminary studies, mutants of PABP1 that cannot bind paxillin are inefficiently exported from the nucleus and are thus unable to reach the leading edge of migrating cells. Furthermore, cells expressing these mutants are unable to migrate directionally, raising the possibility that PABP1 must associate with paxillin to maintain cell polarity during migration.Recent NMR and crystallographic studies of the complex formed between paxillin and focal adhesion kinase highlight the dangers of undertaking mutagenesis studies without detailed information on the structure of the intermolecular complex. We therefore propose a detailed structural analysis of the paxillin/PABP1 complex using biochemical and biophysical technologies. We have demonstrated the feasibility of this approach by collecting preliminary NMR spectra showing a domain/domain interaction between paxillin and PABP1. We propose to pursue these approaches to obtain detailed information of the intermolecular contacts between paxillin and PABP1, and how these relate to the association of PABP1 with mRNA and components of the translation apparatus. Using this information we will construct mutants of PABP1 that have reduced affinity for paxillin, and synthesise peptide antagonists of paxillin/PABP1 interaction. These will be designed to have minimal effect on the folding of PABP1, its association with mRNA and ability to enhance poly(A)-dependent translation. These mutant PABP1s and cell permeant peptides will allow determination of the requirement for paxillin in the export of mRNA from the nucleus and its transport to the leading edge of migrating cells. We will also measure various parameters of cell movement on 2D and 3D matrices following disruption of the paxillin/PABP1 complex and evaluate the requirement for this aspect of mRNA trafficking during directional migration. We anticipate that this parallel application of biochemical, biophysical and cell biological approaches will yield valuable information concerning the molecular mechanisms by which mRNA is trafficked in migrating cells and how this relates to the development of cell polarity.

Publications

10 25 50
 
Description One of the major mechanisms by which cells
generate and maintain polarity during migration is
by trafficking and localising particular mRNAs to
specific sub-cellular compartments, such as the
leading edge or lamellipodium. Translation of
these mRNAs is then prompted by signalling
pathways initiated by interactions of adhesion
receptors, such as integrins, with the
extra-cellular matrix. Paxillin is a component of
focal complexes at the leading edge of migrating
cells, and acts as an adaptor protein between
integrin cytodomains, and numerous proteins which
interact with the cytoskeleton of the cell.




We identified three distinct independent sites on
paxillin and PABP1 that are involved in the
interaction between the proteins and solved the
NMR structure of the complex to demonstrate that
LD1 interacts with the RNA-binding surface of
RRM2. This mode of peptide binding is completely
novel for RRM domains, where most of the peptides
bind at the sites distinct from the RNA-binding
surface. Using structural information we
identified several residues on the RRM2 surface
that are critical to the LD1 binding but not
involved in the interaction with RNA. We have
designed PABP1 mutations at these positions that
selectively disrupt the interaction with LD1, but
not the binding to RNA.




In parallel with the structural analysis, we
have analysed the requirement for paxillin in the
selectivity of mRNA transport using microarray
analysis. We identified 11 mRNAs that have
significantly altered translational efficiency in
the presence and absence of paxillin. Particularly
interesting were mRNAs encoding aurora kinase b
(AKb) and b-actin. Crucially, the former has not
previously been implicated in cell migration. We
demonstrated that AKb is indeed up-regulated in
migration and that this is paxillin-dependent,
confirming and extending the conclusion of our
microarray experiments. We have pursued these
observations and found that AKb contributes to
cell migration and by allowing appropriate
orientation of microtubule organising centre
toward the direction of cell movement.
Exploitation Route Structural information can be used for design on
PABP1 inhibitors. Biotech and pharmaceutical
companies
Sectors Pharmaceuticals and Medical Biotechnology

 
Description The results have been deposited to the database and may be used by biotech and pharmaceutical companies to design PABP1 inhibitors. To gain industrial traction further research and funding is required. Results were used in the undergraduate and postgradual teaching
First Year Of Impact 2009
Sector Education
 
Title Solution structure of RRM2 domain of PABP1 
Description PDB deposition of the solution structure of RRM2 domain of PABP1 
Type Of Material Database/Collection of data 
Year Produced 2009 
Provided To Others? Yes  
Impact facilitated research 
 
Description Structural and functional studies of talin 
Organisation University of Manchester
Country United Kingdom 
Sector Academic/University 
PI Contribution The collaboration links in vitro analysis of talin with cell studies. Critical for the understanding of the role of talin in adhesion. Generated further publications and grant applications in the adhesion area. Stimulates multi-disciplinary research.
Start Year 2011
 
Description Talin link to the integrin regulation 
Organisation University of Turku
Country Finland 
Sector Academic/University 
PI Contribution Structural analysis on the novel regulator of integrin activity.
Start Year 2010