Development of novel multivalent vaccines

Lead Research Organisation: ANIMAL AND PLANT HEALTH AGENCY
Department Name: Statutory and Exotic Viral Diseases

Abstract

The objective of this project is to use reverse genetics to develop better ways of making vaccines that protect against more than one disease (multivalent vaccines). This technology allows us to mutate RNA virus genomes through DNA copies (cDNA) of the RNA genome. The new genome cDNA can then be used to obtain the mutated form of the virus. In these studies we will use an existing vaccine for peste des petits ruminants virus (PPRV), as a vector to deliver antigens from other economically important viruses. PPRV causes a devastating plague in small ruminants and has a severe impact on animal welfare and the economies of many countries in Africa and Asia. In previous studies using this technology with a related virus, rinderpest virus (RPV), we were able to express foreign proteins efficiently in infected cells and to produce effective marker vaccines for RPV as well as identify some of the molecular factors which determine differences in virulence between virus strains. Recently it has been shown that the genome of measles virus (MV), a closely related virus, can be artificially segmented and that cDNAs of these segments can be used in a similar way to the full-length nonsegmented cDNA to rescue viable virus. The segmentation and rescue of PPRV will provide a new way to deliver immunogens from other small ruminant viral pathogens. Work with other nonsegmented negative strand (NNS) viruses has shown that there is a limit to the amount of extra genetic material that can be added to NNS virus genomes before a reduction in virus viability is seen. Segmentation of NNS genome can effectively overcome this limit, as evidenced by the ability of the segmented MV to encode at up to six foreign proteins efficiently. If this is applicable to related viruses then it would increase their coding capacity and enable us to produce multivalent vaccines to simultaneously protect against several economically important diseases of ruminants and increase their cost-effectiveness. Whilst RPV has been virtually eliminated from the globe as a result of a concerted vaccination campaign over the past 20 years, PPRV is a disease emerging in new regions of the world and is now causing great economic losses across much of the developing world as well as on the borders of the European Union. The current live-attenuated vaccines developed for PPRV are safe and highly effective and are, therefore, ideal candidates for use as vaccine vectors that can be tagged to allow differentiation between infected and vaccinated animals. We wish to explore the segmented approach using PPRV as a vector delivery system for multiple antigens from other economically significant viruses such as bluetongue virus (BTV) and Rift Valley Fever virus (RVFV), insect borne pathogens which can infect cattle and sheep, the latter also being able to infect humans. BTV and RVFV were once considered exotic diseases although recently BTV has entered the European Union, having a devastating effect on agriculture. RVFV has the potential to also enter Europe as insect vectors that carry BTV may also competent for RVFV infection. Current use of the PPRV vaccine generates a sterilising immunity that gives lifelong protection against the virus and, for RVFV, a similar response is thought to be generated post vaccination. However, for BTV a number of distinct genetic variants exist which, although diverse, cluster across distinct geographical regions. We wish to develop vaccines that target viruses circulating within a specific areas. Both RVFV and BTV are endemic across much of Asia and Africa and effective vaccination strategies are integral to their control. The three viral diseases targeted in this proposal are in line with the BBSRC's combating diseases of the developing world strategy as well as DFID's long term commitment to improving the sustainability of agriculture in developing countries.

Technical Summary

The objective of the proposed work is to explore ways of producing novel multivalent vaccine delivery systems using reverse genetics technology. Reverse genetics provides a means to manipulate the genomes of non-segmented, negative strand RNA (NNS) viruses through DNA copies of their genomes. Virus can be 'rescued' from the cDNAs and the effects of any changes introduced into the viral sequence can be studied both in vitro and in vivo. For this work we will use peste des petits ruminants virus (PPRV), a morbillivirus which is closely related to human measles virus (MV) that causes a devastating plagues in sheep and goats and in some wild ruminants. Recently it has been shown that the MV genome can be artificially segmented and that these segments can also be used to rescue viable virus. This is a very promising avenue to explore for the production of multivalent vaccines that also enable serological differentiation between infected and vaccinated animals within the herd post vaccination, so called DIVA vaccines. We wish to use segmented versions of PPRV as a vaccine vector to express immunogens from other viral disease of small ruminants such as Rift Valley Fever virus (RVFV) and Bluetongue virus (BTV). This approach would be highly cost-effective as available vaccination strategies for these viruses are problematic. Current use of the PPRV vaccine generates a sterilising immunity that gives lifelong protection against the virus and, for RVFV, a similar response is thought to be generated post vaccination. However, for BTV a number of different serotypes exist which, although diverse, cluster phylogenetically allowing the possibility of neutralisation both within and between different serotypes. This approach will allow the rapid development of effective vaccines to protect against all BTV serotypes circulating within distinct locations by creating a bank of recombinants representing each serotype.

Planned Impact

Should the aim of this project be realised the impact on agricultural practises within the developing world will be profound. All three of these viruses targeted in this proposal affect farm animals, especially small ruminants that are the mainstay of rural economies in the developing world. The application of PPRV as a live attenuated vaccine vector expressing immunogens from BTV and RVFV will potentially reduced the administration of vaccine to a one dose schedule to cover all three viruses, greatly aiding the current situation for protecting small ruminants against these diseases. This factor is of great importance across the developing world where the economic infrastructure is often unable to support mass vaccination campaigns, especially where multiple dose schedules are required. The development of such multivalent vaccines against these agents will reduce the burden of disease and in turn through improving the sustainability of agricultural practises, help alleviate poverty. These areas will benefit from enhanced animal health and animal production resulting from the availability of safe multivalent vaccines for disease control and eradication programmes. The impact of PPRV, RVFV and BTV across the developing world is of great importance to sustainable agriculture in these areas. These diseases are of particular concern to subsistence farmers in remote areas where vaccination of domestic animals is difficult to achieve. The development of multivalent vaccines, which protect against several pathogens of sheep and goats with one vaccination, increases the financial viability of vaccination programmes through their cost-effectiveness. Furthermore, developing vaccines and novel diagnostic assays that allow differentiation between naturally infected and vaccinated animals is of paramount importance in combating these infectious agents. The technology detailed in this proposal will be used to add both positive and negative serologically detectable genetic markers that will allow serological differentiation of vaccinated animals from those naturally infected. This factor, using both current and novel serological assays, will enhance serosurveillance of vaccinated animals and identify pockets of animals that have come into contact with circulating virus strains. In developing research that aims to generate vaccines to combat such diseases this proposal strongly supports the BBSRCs Animal Science strategy and highlights the research council's dedication to fighting disease on a global scale. In addition a report sponsored by DFID highlighted PPR as a transboundary disease which threatens the economic health of many developing countries. Within the scientific community the potential impacts of this research will be realised through several pathways: through presentations of the results of this research at national and international scientific conferences; through contacts with international bodies (FAO / OIE) dealing with transboundary diseases; through public presentation of the data through media contacts and by direct contact with the commercial sector since the project involves a vaccine manufacturer, Indian Immunologicals Limited (IIL). IIL is a subsidiary of the Indian National Dairy Development Board. As a non-profit making organisation they have a mandate to provide cheap and effective vaccines and other health products for farm animals in India. In Africa this contact will be made through the National Institute for Communicable Diseases (NICD) in Johannesburg which deals with relevant transboundary diseases for Southern Africa. The resources for these impact activities will firstly be through the established contacts of the participating laboratories with regional and national laboratories in developing countries which are ongoing and the funding which will be provided by the project for research, training and travel to international conferences where further networking opportunities will arise.

Publications

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Description This grant has enabled the first recovery of peste des petts ruminants virus from a DNA copy of its genome. Furthermore we have assessed this virus in the natural host of the animal and assessed changes to the surface coat protein in the immune response to vaccination
 
Title Development of a reverse genetics system for PPRV and potential DIVA tools 
Description We have developed an in vitro method for rescue of PPRV from a cDNA. We have also performed and published the first in vivo assessment of the rescue virus in its natural host, goats. 
Type Of Material Model of mechanisms or symptoms - mammalian in vivo 
Provided To Others? No  
Impact The resulting publication highlights potential mechanisms for DIVA development for PPRV 
 
Description Development of collaboration with Chinese PPRV group 
Organisation China Animal Health and Epidemiology Center (CAHEC)
Country China 
Sector Academic/University 
PI Contribution Through the CIDLID initiative we further sought and were awarded a BBSCR Partnering award to partner with colleagues in China from the China Animal Health and Epidemiology Center, Qingdao, Shandong, China.
Collaborator Contribution Discussions and outputs for joint publications
Impact Jingyue Bao, Qinghua Wang, Satya Parida, Chunju Liu, Ling Zhang, Wenji Zhao, and Zhiliang Wang (2012) Complete Genome Sequence of a Peste des Petits Ruminants Virus Recovered from Wild Bharal in Tibet, China J. Virol. October 86:10885-10886; This manuscript represents outputs from a visit by Prof Parida and Dr Banyard to collaborators as part of a BBSRC China partnering award. Whilst this work has not been directly funded by the CIDLID project, collaboration sought following initation of the CIDLID led to the coming together of the groups, and the application for a partnering award to work with our Chinese collaborators. Further publications with our Chinese collaborators are in press currently
Start Year 2012
 
Description Establishment of collaboration with scientists in Pakistan to build capacity in the country 
Organisation PARC Institute of Advanced Studies in Agriculture
Country Pakistan 
Sector Academic/University 
PI Contribution Part of the award was to develop collaboration with research and diagnostic facilities in areas where the virus is endemic. To this end we targetted Pakistan as a country with a significant problem with PPRV but with little infrastructure to diagnose the disease effectively.
Collaborator Contribution Collaborative assessment of data and outbreak scenario setting.
Impact Abubakar, M., Ashiq, S., Zahoor, A. B., Arshed M. J., and Banyard, A. C., (2011). Diagnosis and Control Strategies for Peste Des Petits Ruminants Virus: Global and Pakistan Perspectives. Pak. Vet J. 31(4): 267-274. (PEER REVIEWED/OPEN ACCESS) This review represents the initial formal collaboration between the grant holder and a team of scientists in Pakistan with PPRV experience. The lead author is a developing country researcher. It also represent a document that can easily be accessed by researchers in Pakistan where access to international journals may be problematic. Abubakar, M., Arshed M. J., Zahoor, A. B., Qurban A. and Banyard, A. C. (2012). Natural infection with Peste des petits ruminants virus: A pre and post vaccinal assessment following an outbreak scenario. Virus Research, 167: 43-47 This manuscript highlights continued collaboration between the PI and the Pakistani research team. A visit by members of the Pakistani group were planned for 2012 but due to alteration to the laboratory infrastructure at AHVLA visits by developing world researchers have been delayed. However, plans are underway for a member of Dr Abubakars team to visit the PI at AHVLA during the life time of the grant. The lead author is a developing country researcher.
Start Year 2011
 
Description Training in molecular tools and establishment of collaboration 
Organisation Biofarma
Country Morocco 
Sector Private 
PI Contribution Prof Satya Parida provided 2 weeks training on PPRV diagnostics including real time PCR and sequence analysis for collaborators from Biofarma, Morocco.
Collaborator Contribution Involvement in developing a suitable challenge model for PPRV.
Impact El Harrak M., Touil N., Loutfi C., Hammouchi M., Parida S., Sebbar G., Chaffai N., Harif B., Messoudi N., Batten C., and Oura C., (2013). A reliable and reproducible experimental challenge model for Peste-des-petits ruminants. J. Clin. Microbiol. Muniraju, M., El Harrak, M., Aravindh Babu, Carrie Batten, Ashley C. Banyard, Satya Parida (2013). Complete genome sequence of a Peste-des-Petits Ruminants Virus recovered from alpine goats in Morocco. Genome announcement. June 2013.
Start Year 2011