Molecular control of synaptobrevin retrieval and its biological function by synaptophysin
Lead Research Organisation:
University of Edinburgh
Department Name: Centre for Discovery Brain Sciences
Abstract
Brain cells (neurones) communicate by releasing chemical neurotransmitters. Neurotransmitters are stored in small spherical compartments within neurones called synaptic vesicles (SVs). When neurones communicate, SVs fuse with the outer surface of the neurone causing neurotransmitter release. After neurotransmitter release these SVs are reformed by a process called endocytosis. The correct formation of SVs during endocytosis is essential for the maintenance of neurotransmitter release, since SVs with the wrong composition will be faulty for subsequent fusion. A critical part of SV generation is the packaging the correct proteins in the correct amounts into SVs. This is usually done by specific molecules called adaptor proteins, however in some cases additional molecules are required.
We have recently identified an essential role for the protein synaptophysin in coordinating the packaging of sybII into SVs during endocytosis. While these proteins are known to stick to each other, no-one knows which regions of the proteins are important for this. Other molecules are also suggested to be required to control sybII and synaptophysin packaging into SVs. These are AP180 and AP-2. We have proposed a working model whereby all four proteins stick together in a coordinated manner to control packaging of sybII and synaptophysin into SVs. This model will be tested in this application. Finally various different types of syb are found on SVs, all of which have specific jobs in the control of neurotransmitter release. Therefore synaptophysin may also control their packaging into SVs and subsequently their biological role.
We propose that synaptophysin is the central organiser in the packaging of different syb molecules into SVs during endocytosis. We will test this by a number of approaches. We will examine how syb movements differ when the gene encoding synaptophysin is removed from neurones grown on glass coverslips. We will also examine the simultaneous movement of altered forms of sybs and synaptophysin which do not stick to each other to see how their interaction controls their function. We will also monitor syb and synaptophysin movement in the absence of AP180 or AP-2. Finally we will determine how interfering with the normal function of synaptophysin in syb retrieval alters neurotransmitter release by detecting it indirectly via electrical changes in neighbouring neurones.
The combination of experiments outlined in this application will systematically dissect the role of synaptophysin in both the control of the packaging of different sybs into SVs but also its downstream functions in neurotransmitter release. This is very important, since a decrease in the efficiency of syb packaging into SVs is proposed to underlie a series of neurodegenerative and neurodevelopmental disorders such as Alzheimer's Disease, Parkinson's Disease and X-linked intellectual disability. It will also provide important leads outside this field, since the mutants created in this application can be used to examine other possible neuronal functions of synaptophysin such as the formation of connections between neurones in brain.
We have recently identified an essential role for the protein synaptophysin in coordinating the packaging of sybII into SVs during endocytosis. While these proteins are known to stick to each other, no-one knows which regions of the proteins are important for this. Other molecules are also suggested to be required to control sybII and synaptophysin packaging into SVs. These are AP180 and AP-2. We have proposed a working model whereby all four proteins stick together in a coordinated manner to control packaging of sybII and synaptophysin into SVs. This model will be tested in this application. Finally various different types of syb are found on SVs, all of which have specific jobs in the control of neurotransmitter release. Therefore synaptophysin may also control their packaging into SVs and subsequently their biological role.
We propose that synaptophysin is the central organiser in the packaging of different syb molecules into SVs during endocytosis. We will test this by a number of approaches. We will examine how syb movements differ when the gene encoding synaptophysin is removed from neurones grown on glass coverslips. We will also examine the simultaneous movement of altered forms of sybs and synaptophysin which do not stick to each other to see how their interaction controls their function. We will also monitor syb and synaptophysin movement in the absence of AP180 or AP-2. Finally we will determine how interfering with the normal function of synaptophysin in syb retrieval alters neurotransmitter release by detecting it indirectly via electrical changes in neighbouring neurones.
The combination of experiments outlined in this application will systematically dissect the role of synaptophysin in both the control of the packaging of different sybs into SVs but also its downstream functions in neurotransmitter release. This is very important, since a decrease in the efficiency of syb packaging into SVs is proposed to underlie a series of neurodegenerative and neurodevelopmental disorders such as Alzheimer's Disease, Parkinson's Disease and X-linked intellectual disability. It will also provide important leads outside this field, since the mutants created in this application can be used to examine other possible neuronal functions of synaptophysin such as the formation of connections between neurones in brain.
Technical Summary
We have recently identified a key role for the SV protein synaptophysin protein in the retrieval of sybII during endocytosis in central nerve terminals. Synaptophysin and sybII are known interaction partners, however the molecular basis of their interaction is still undetermined. We propose a working model where synaptophysin presents sybII in a "retrieval competent" conformation, allowing a simultaneous interaction with adaptor molecules AP180 and AP-2 respectively, which will be tested in work outlined in this application. Multiple forms of syb reside on SVs, all performing specific roles in neurotransmitter release. We propose that synaptophysin may also control their retrieval and thus their neuronal function. In support we have key pilot data showing the syb homologue Vti1a is stranded at the plasma membrane of synaptophysin knockout neurones, a phenotype reversed by expression of the wild-type protein.
The major hypothesis underlying this application is that synaptophysin is the hub of a molecular complex which co-ordinates efficient retrieval of synaptobrevin homologues to direct multiple neuronal events. This will be tested via the simultaneous monitoring of sybII and synaptophysin traffic in wild-type and synaptophysin knockout neurones. The role of the reciprocal interactions between sybII, synaptophysin, AP180 and AP-2 will be determined via expression of interaction mutants, shRNA knockdown and inhibition by competitive peptides. Finally the biological role of synaptophysin in controlling neurotransmitter release via the traffic of multiple sybs will be assessed using an integration of live imaging and paired electrophysiological recordings in culture.
The outcome of these experiments will be the determination of the molecular role of synaptophysin in the control of multiple facets of neurotransmitter release.
The major hypothesis underlying this application is that synaptophysin is the hub of a molecular complex which co-ordinates efficient retrieval of synaptobrevin homologues to direct multiple neuronal events. This will be tested via the simultaneous monitoring of sybII and synaptophysin traffic in wild-type and synaptophysin knockout neurones. The role of the reciprocal interactions between sybII, synaptophysin, AP180 and AP-2 will be determined via expression of interaction mutants, shRNA knockdown and inhibition by competitive peptides. Finally the biological role of synaptophysin in controlling neurotransmitter release via the traffic of multiple sybs will be assessed using an integration of live imaging and paired electrophysiological recordings in culture.
The outcome of these experiments will be the determination of the molecular role of synaptophysin in the control of multiple facets of neurotransmitter release.
Planned Impact
Communications and Engagement
The major beneficiaries outside the academic community will be the commercial private sector, primarily pharmaceutical companies. Prof. Cousin has previously explored such interactions in research funded by CHDI and UCB Pharma. Work originating from this application will provide a platform for future interactions by 1) creating new links with potential private sector partners or 2) by exploiting existing partnership links to design and develop modulators of synaptophysin-dependent sybII traffic.
At key stages in the project critical junctures will arise where a commercial partner could add great value. At these points existing contacts (via Prof. Cousin) and possible new partners will be contacted with a view to entering partnership agreements. All of these discussions will be brokered by technology transfer staff at the University of Edinburgh.
Prof. Cousin will engage the wider general public in conjunction with the University of Edinburgh Press Office, which has an excellent record of communicating research highlights to the public. Information will also be circulated to current and prospective students as well as partner organisations within the public and private sectors.
Collaboration
The project will be managed by Prof. Cousin in collaboration with Dr. Gordon. The roles and responsibilities for day to day project management are explained in the justification section.
Exploitation and Application
Intellectual property management, licensing and technology and knowledge transfer will be handled by the research office at University of Edinburgh. Edinburgh Research and Innovation (ERI) has extensive expertise in the protection of intellectual property arising from grant funded research.
Capability
Prof. Cousin will be responsible for the majority of delivery of impact activities in close collaboration with ERI. The team at ERI are expert in the drafting and production of publications for the commercial sector to publicise licensing opportunities or partnership agreements. Previous patents from Prof. Cousin's research have gone through this process. Prof. Cousin has extensive experience in the commercialisation of research and in the development of links with commercial partners, with a number of outputs from his laboratory already patented. Recently he successfully negotiated a collaboration and exploitation agreement between his laboratory, Bio-Link (a life sciences commercialisation company), the Children's Medical Research Institute (Sydney, Australia) and The University of Newcastle (Australia) in the development of novel anti-epileptic pharmaceuticals.
ERI provides instruction and training for academics to prepare academics for media engagements and both Prof. Cousin and Dr. Gordon will be trained as required.
Impact activity deliverables and milestones
Pathways to impact will be evaluated every 6 months. Key milestones to be monitored will be a determination of 1) the molecular interface between synaptophysin and sybII, 2) the constituent components of the synaptophysin-sybII endocytic complex (and their roles) and 3) the physiological consequences of synaptophysin-mediated sybII retrieval in neuronal physiology. Achievement of these milestones will trigger negotiations with commercial partners and their research offices.
Resource for the activity
Resource implications have been outlined in the application. ERI has a technology transfer budget that will cover the initial costs of protecting output from the research.
The major beneficiaries outside the academic community will be the commercial private sector, primarily pharmaceutical companies. Prof. Cousin has previously explored such interactions in research funded by CHDI and UCB Pharma. Work originating from this application will provide a platform for future interactions by 1) creating new links with potential private sector partners or 2) by exploiting existing partnership links to design and develop modulators of synaptophysin-dependent sybII traffic.
At key stages in the project critical junctures will arise where a commercial partner could add great value. At these points existing contacts (via Prof. Cousin) and possible new partners will be contacted with a view to entering partnership agreements. All of these discussions will be brokered by technology transfer staff at the University of Edinburgh.
Prof. Cousin will engage the wider general public in conjunction with the University of Edinburgh Press Office, which has an excellent record of communicating research highlights to the public. Information will also be circulated to current and prospective students as well as partner organisations within the public and private sectors.
Collaboration
The project will be managed by Prof. Cousin in collaboration with Dr. Gordon. The roles and responsibilities for day to day project management are explained in the justification section.
Exploitation and Application
Intellectual property management, licensing and technology and knowledge transfer will be handled by the research office at University of Edinburgh. Edinburgh Research and Innovation (ERI) has extensive expertise in the protection of intellectual property arising from grant funded research.
Capability
Prof. Cousin will be responsible for the majority of delivery of impact activities in close collaboration with ERI. The team at ERI are expert in the drafting and production of publications for the commercial sector to publicise licensing opportunities or partnership agreements. Previous patents from Prof. Cousin's research have gone through this process. Prof. Cousin has extensive experience in the commercialisation of research and in the development of links with commercial partners, with a number of outputs from his laboratory already patented. Recently he successfully negotiated a collaboration and exploitation agreement between his laboratory, Bio-Link (a life sciences commercialisation company), the Children's Medical Research Institute (Sydney, Australia) and The University of Newcastle (Australia) in the development of novel anti-epileptic pharmaceuticals.
ERI provides instruction and training for academics to prepare academics for media engagements and both Prof. Cousin and Dr. Gordon will be trained as required.
Impact activity deliverables and milestones
Pathways to impact will be evaluated every 6 months. Key milestones to be monitored will be a determination of 1) the molecular interface between synaptophysin and sybII, 2) the constituent components of the synaptophysin-sybII endocytic complex (and their roles) and 3) the physiological consequences of synaptophysin-mediated sybII retrieval in neuronal physiology. Achievement of these milestones will trigger negotiations with commercial partners and their research offices.
Resource for the activity
Resource implications have been outlined in the application. ERI has a technology transfer budget that will cover the initial costs of protecting output from the research.
Organisations
- University of Edinburgh (Lead Research Organisation)
- National Center for Scientific Research (Centre National de la Recherche Scientifique CNRS) (Collaboration)
- Florey Institute of Neuroscience and Mental Health (Collaboration)
- Erasmus MC (Collaboration)
- University of Queensland (Collaboration)
- UNIVERSITY OF CAMBRIDGE (Collaboration)
Publications
Cousin MA
(2017)
Integration of Synaptic Vesicle Cargo Retrieval with Endocytosis at Central Nerve Terminals.
in Frontiers in cellular neuroscience
Cousin MA
(2021)
Synaptophysin-dependent synaptobrevin-2 trafficking at the presynapse-Mechanism and function.
in Journal of neurochemistry
Gordon SL
(2016)
A Fine Balance of Synaptophysin Levels Underlies Efficient Retrieval of Synaptobrevin II to Synaptic Vesicles.
in PloS one
Gordon SL
(2016)
The iTRAPs: Guardians of Synaptic Vesicle Cargo Retrieval During Endocytosis.
in Frontiers in synaptic neuroscience
Harper C
(2020)
An Epilepsy-Associated SV2A Mutation Disrupts Synaptotagmin-1 Expression and Activity-Dependent Trafficking
in The Journal of Neuroscience
Harper CB
(2021)
Synaptophysin controls synaptobrevin-II retrieval via a cryptic C-terminal interaction site.
in The Journal of biological chemistry
Harper CB
(2017)
Altered synaptobrevin-II trafficking in neurons expressing a synaptophysin mutation associated with a severe neurodevelopmental disorder.
in Neurobiology of disease
Kokotos AC
(2019)
Synaptophysin sustains presynaptic performance by preserving vesicular synaptobrevin-II levels.
in Journal of neurochemistry
Description | We have discovered a series of key findings relating to the control brain function by the protein synaptophysin. Firstly we found that mutations in the gene encoding synaptophysin found in human patients with either intellectual disability or epilepsy all have the same effect in brain cells. This effect was an inefficient transport of the essential molecule synaptobrevin. Synaptobrevin is essential for brain cell communication and we have found that if synaptophysin function is lost (for example due to a gene mutation) this communication becomes inefficient. We found that synaptophysin also controls the number of synaptobrevin molecules in brain cells, explaining why there is always double the amount of synaptobrevin molecules when compared to synaptophysin. We also discovered the mechanism behind the control of brain function by synaptophysin, with specific parts of this molecule responsible for both synaptobrevin trafficking and its brain level. We also found that synaptophysin works in combination with a different molecule called AP180 to maximize the efficiency of synaptobrevin trafficking. We have also discovered that the principal role of synaptophysin is the control of synaptobrevin retrieval, since too much synaptobrevin rescues function in synaptophysin knockout neurons and when experiments are performed at physiological temperatures the only remaining dysfunction in synaptobrevin retrieval. All of these findings reveal that synaptophysin is a key molecule for correct brain function and methods to correct synaptobrevin trafficking may be beneficial in a range of neurodevelopmental disorders. We also discovered that a protein called SV2A behaved in a very similar manner to synaptophysin, but in this instance it controlled the trafficking of a different essential protein for brain communication, synaptotagmin-1. We also revealed that faulty trafficking of synaptotagmin-1 is linked to epilepsy, since mutations in the SV2A gene in people with epilepsy disrupted SV2A-dependent synaptotagmin-1 trafficking. |
Exploitation Route | We discovered a class of presynaptic molecules called iTRAPs, which are SV cargo proteins that control the retrieval and trafficking of specific SV cargoes (synaptophysin and SV2A). We have established a series of criteria that iTRAPs must fulfil to be part of this class of trafficking adaptors. We hope that the field will use this information, as we will do, to search for other iTRAP molecules. In addition we have established that dysfunctional synaptobrevin (and synaptotagmin-1) trafficking is central to both intellectual disability and epilepsy. The challenge for the field is to develop therapeutic strategies to correct this synaptophysin-dependent defect both in vitro and in vivo. Since a number of individuals are effectively synaptophysin null (due to nonsense mediated mRNA decay), these interventions will have to target parallel mechanisms rather than synaptophysin itself. |
Sectors | Pharmaceuticals and Medical Biotechnology,Other |
Description | Callista Harper - EMBO Travel Award |
Amount | £199 (GBP) |
Organisation | European Molecular Biology Organisation |
Sector | Charity/Non Profit |
Country | Germany |
Start | 09/2017 |
End | 09/2017 |
Description | Callista Harper - Guarantors of Brain Travel Award |
Amount | £600 (GBP) |
Organisation | Guarantors of Brain |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 09/2017 |
End | 09/2017 |
Description | Gordon Research Conference travel award - Callista Harper |
Amount | £500 (GBP) |
Organisation | Gordon Research Conferences |
Sector | Charity/Non Profit |
Country | United States |
Start | 08/2016 |
End | 08/2016 |
Title | pHluorin - pSUPER vectors |
Description | We have generated two new genetically-encoded reporters which co-express shRNA with either synaptophysin-pHluorin or synaptotagmin-phluorin |
Type Of Material | Technology assay or reagent |
Provided To Others? | No |
Impact | None yet, but actively being used in the project currently. |
Description | Collaboration Grazia Manchini |
Organisation | Erasmus MC |
Country | Netherlands |
Sector | Hospitals |
PI Contribution | We investigated the role of a human mutation in the gene encoding synaptophysin |
Collaborator Contribution | Our collaborators identified the mutation in a patient. |
Impact | Harper C.H., Mancini G.M.S., van Slegtenhorst M. And Cousin M.A. (2017) Altered synaptobrevin II trafficking in neurons expressing a synaptophysin mutation associated with a severe neurodevelopmental disorder. Neurobiol. Dis. 108: 298-306. |
Start Year | 2016 |
Description | Dr. Sarah Gordon - Synaptophysin / synaptotagmin function in vesicle recycling |
Organisation | Florey Institute of Neuroscience and Mental Health |
Country | Australia |
Sector | Academic/University |
PI Contribution | My laboratory provided expertise, genetically-encoded reporters of presynaptic function and transgenic animal models. |
Collaborator Contribution | Intellectual input and collaborative experiments using the same tools and systems |
Impact | This is not multidisciplinary research. We have published 4 manuscripts in collaboration with Dr. Sarah Gordon. |
Start Year | 2016 |
Description | Human mutations in synaptotagmin-1 (Dr. Kate Baker) |
Organisation | University of Cambridge |
Department | Cambridge Institute for Medical Research (CIMR) |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | We have performed synaptic vesicle recycling assays on some human mutations and also offered advice on mechanism of action. |
Collaborator Contribution | They identify the human mutations, phenotype the patients and have also generated mouse models. |
Impact | Two publications - Baker K., Gordon S.L., Melland H., Bumbak F., Scott D.J., Jiang T.J., Owen D., Turner B.J., Boyd S.G., Rossi M., Al-Raqad M., Elpeleg O., Peck D., Mancini G.M.S., Wilke M., Zollino M., Marangi G., Weigand H., Borggraefe I., Haack T., Stark Z., Sadedin S; Broad Center for Mendelian Genomics, Tan T.Y., Jiang Y., Gibbs R.A., Ellingwood S., Amaral M., Kelley W., Kurian M.A., Cousin M.A., Raymond F.L. (2018) SYT1-associated neurodevelopmental disorder: a case series. Brain 141:2576-2591. Baker K., Gordon S.L., Grozeva D., van Kogelenberg M., Roberts N.Y., Pike M., Blair E., Hurles M.E., Kling Chong W., Baldeweg T., Kurian M.A., Boyd S., UK10K consortium, Cousin M.A. and Raymond F.L. (2015) A human mutation in SYT1 that perturbs synaptic vesicle recycling. J. Clin. Invest. 125: 1670-1678. |
Start Year | 2014 |
Description | Role of PLSCR1 in synaptic vesicle recycling |
Organisation | National Center for Scientific Research (Centre National de la Recherche Scientifique CNRS) |
Department | The Institute of Physics and Chemistry of Materials of Strasbourg (IPCMS) |
Country | France |
Sector | Academic/University |
PI Contribution | We trained the PhD student of Prof. Stephane Gasman in assays of synaptic vesicle recycling, to allow him to investigate this in his PLSCR1 knockout mouse model |
Collaborator Contribution | They provided the PLSCR1 mouse model |
Impact | None yet |
Start Year | 2022 |
Description | Super-resolution collaboration |
Organisation | University of Queensland |
Department | Queensland Brain Institute |
Country | Australia |
Sector | Academic/University |
PI Contribution | We approached the laboratory of Prof. Frederic Meunier to visualize the trafficking and distribution of synaptotagmin-1 in the nanoscale. We provided plasmids to allow them to perform a series of super-resolution microscopy experiments. |
Collaborator Contribution | We approached the laboratory of Prof. Frederic Meunier to visualize the trafficking and distribution of synaptotagmin-1 in the nanoscale. They are experts in super-resolution microscopy and performed a series of collaborative experiments using our plasmids that resulted in a publication in Journal of Neuroscience (2020). |
Impact | Manuscript - An Epilepsy-Associated SV2A Mutation Disrupts Synaptotagmin-1 Expression and Activity-Dependent Trafficking. Harper CB, Small C, Davenport EC, Low DW, Smillie KJ, Martínez-Mármol R, Meunier FA, Cousin MA. J Neurosci. 2020 Jun 3;40(23):4586-4595 |
Start Year | 2018 |