Basal ganglia signalling mechanisms and aging

Lead Research Organisation: University of Oxford
Department Name: Pharmacology

Abstract

Without a doubt aging process involves many changes in the different tissues and organs. It is recognized by now that the basal ganglia circuits, which are primarily involved with movement control, are one of the most vulnerable to age-related effects causing gross and fine motor declines, such as balance and gait deficits, coordination deficits, and slowing of movement. It is unclear, however, how these changes are regulated during aging.
A much better understanding of the specific roles played by the basal ganglia circuits, namely the direct and indirect pathways, both in normal and pathological behaviors (such us Parkinson's or Huntington's disease, considered mainly movement disorders) is needed in order to facilitate development of specific therapies that could precisely target or modulate the activity of the pathway disrupted and eventually reestablish balance to the affected system.

We have recently shown that loss of TrkB signalling in striatopallidal ENK+ neurons lead to age-dependent spontaneous hyperlocomotion, associated with reduced striatopallidal activation, demonstrating that BDNF-TrkB signaling in striatal ENK+ MSNs contributes to the inhibitory control of locomotor behavior exerted by the indirect pathway.
Hence, we have established a unique mouse model that provides a rare example of age-dependent locomotor defect. Here we propose to identify the genes and associated molecular pathways relevant to locomotor activity control. In order to do so we have been able to bring together a unique team of expertise covering behaviour, neurobiology, gene expression, intracellular signalling and protein chemistry. This will allow the use of combinatorial state of the art approaches to first of all understand basic mechanisms regulating age-dependent locomotor activity and at the same time to investigate novel avenues to explore therapeutic interventions against loss of quality of life during aging.

Technical Summary

We have recently shown that loss of TrkB signalling in striatopallidal ENK+ neurons lead to age-dependent spontaneous hyperlocomotion, associated with reduced striatopallidal activation, demonstrating that BDNF-TrkB signaling in striatal ENK+ MSNs contributes to the inhibitory control of locomotor behavior exerted by the indirect pathway. Hence, we have established a unique mouse model that provides a rare example of age-dependent locomotor defect.
To address the mechanisms underlying TrkB signalling contribution to normal and altered locomotor activity control during aging we will perform time course transcriptome analysis (by RNAseq) of young and aged striatopallidal neurons, in the presence or absence of TrkB signalling. This analysis will be performed on a mouse line carrying both the fluorescent reporter allele (tdTomato) and specific Trkb deletion in striatopallidal neurons (TrkbPenK-KO;Ai9/+), and a respective control line (BAC-Penk-Cretg/+; Ai9/+ and), to allow isolation of a pure population of striatopallidal neurons, and subsequent data validation analysis by the Biomark Fludigm Dynamic Array system for quantitative real-time PCR analysis. These experiments will then be followed by the in vivo functional validation of identified GOIs. For this analysis we will use a lentiviral shRNA transduction approach. For genes/pathways that are down-regulated in aged/mutant mice we will test if knockdown wholly or partially generates a phenocopy of the hyperlocomotor phenotype. Conversely, for genes/pathways where up-regulation correlates with hyperlocomotion knockdown will be performed on aged mutant mice displaying the phenotype, and these will then be analysed for (wholly or partial) correction of the phenotype. In vivo knockdown efficiency will be validated by FACS of EGFP+/tdTomato+ cells followed by real-time PCR analysis.

Planned Impact

The proposed research project will elucidate basic mechanisms and events underlying age-dependent changes in mice carrying altered neurotrophin signaling in a specific population of neurons (namely the striatopallidal neurons), and characterize the cell biological changes that occur in an age-dependent manner. As with any basic research project, its impact on the economy and quality of life is difficult to foresee. However, effective clinical research and trials rely completely on high quality basic science for design and interpretation, and our work will enhance clinical neurologist concepts in basal ganglia age-related normal and pathological behaviors; as well as general practitioners dealing with the aging population, local authority and health trusts.. Importantly it will also allow us to initiate molecular dissection of signalling pathway/s and molecules involved in the regulation of age-dependent neuronal changes, and ultimately this will facilitate the development of therapies that could specifically target or modulate the activity of the pathway disrupted and eventually reestablish balance to the affected system. Therefore, this would be of interest to the pharmaceutical industry.

Although the potential impact of these studies is obvious, there are still difficulties to overcome. By identifying how neurotrophin signalling interacts with the cellular machinery-regulating aging, and the specific changes associated with normal aging or specific to our model, we will have identified potential novel risk factors therapeutic targets and diagnostic markers for basal ganglia age-related normal and pathological behaviors. However, it first needs to be established whether the principle mechanisms observed in the mouse model also apply to humans. These studies in humans are much more challenging. Nonetheless, we will initiate collaborations with local clinical neurologists, communicate our findings to them through the Medical School at the University of Oxford, both to make them aware of the basic molecular mechanisms regulating striatal circuits function in ageing and/or age-dependent basal ganglia pathological behaviors that we have discovered, and to seek their feedback on humans correlation for the specific disorders. We will also discuss the possibility to validate our observations and eventually mechanistic findings on human diseased samples. Depending on the results further steps will be considered.

Moreover, we will effectively communicate the findings of this project and its wider significance to other scientists, policy-makers and the public, all areas where the PI has significant experience acquired in the past from other projects. First of all, the findings of this project will be communicated to other scientists through our original research papers and reviews, which will all be available via PubMed, but also through oral and poster presentations by the applicants and the post-doctoral researcher employed on the project at scientific conferences. The project proposed here is of a basic science nature and as such the dissemination of findings for public engagement will typically be through the scientific literature, press releases and public statements under the guidance of the University of Oxford and the BBSRC as appropriate.

The PI has in the past also worked effectively with press offices of other Institutions such as the European Molecular Biology Laboratory (EMBL) leading to articles in the media about our discoveries in the fields of learning and memory, cell signaling and neurobiology in general; and recently she has worked with the press office at the University of Oxford to disseminate our recent discoveries. We will also work closely with press officers at the BBSRC. Together, this will allow to communicate aspects of this research to the general public and to policy-makers and to explain its potential importance for medicine.
 
Description The work funded by this BBSRC project was aimed at elucidating basic molecular mechanisms involved in various aspects of motor processes in ageing using a novel mouse model. This is a fundamental step to facilitate the development of strategies to improve/revert motor disorders, initially in the murine system, but with the ultimate goal of applying the knowledge obtained to human health. Briefly, identifying the molecular mechanisms that initiate the ageing process requires specific, unbiased, quantitative and genome-wide interrogation of the particular cell types that form the relevant brain circuits. For this purpose, quantitative transcriptome analysis, such as RNA sequencing (RNAseq), offers higher resolution than other methods. However, it has proven a significant challenge to isolate adult or aged neurons under conditions that allow whole transcriptome analysis from limited numbers of cells, critical to gene profile prospectively isolated, purified neuronal subsets. Therefore, we have established an optimized version of a previously published method (Smart-seq2) that has allowed the isolation and flow cytometric purification of adult and aged CNS neurons, followed by the generation of sequencing libraries from = 200 sorted neurons or single neurons. And permitting subsequent accurate quantification of gene expression changes from rare and specific neuronal populations from individual mice. These optimized methods have now been published (DOI 10.1007/7657_2017_3, and DOI 10.1007/7657_2017_4). The above led, in particular, to the discovery of an enzyme that is involved in a cell-protective pathway. This enzyme is highly dysregulated in the absence of BDNF/TrkB signalling in the brain cells known to be initially affected in neurodegenerative disorders such as Huntington's disease (HD). Such deregulation leads to an age-dependent motor dysfunction consistent with the symptoms of early-stage HD. Using the in vivo shRNA intracranial viral transduction approach in pre-symptomatic mouse mutants, we have confirmed that this enzyme is critical to this process, supporting our novel model's relevance to study the mechanisms underlying progressive neuronal dysfunction (Guo et al., manuscript in preparation).
Exploitation Route This project's key purpose was to gain fundamental knowledge of the signalling mechanisms maintaining motor function within the striatum. Clearly, such knowledge will be useful to design therapies to counteract deficiencies in the neuronal circuits involved, based on the specific pathway and molecule identified as a critical regulator of their activity. Therefore, we now aim to apply the acquired knowledge to an appropriate diseased model to generate proof of concept and demonstrate the eventual therapeutic value of this novel target for preventing or delaying the neurodegenerative process in disorders such as HD.
Sectors Education,Healthcare,Pharmaceuticals and Medical Biotechnology

 
Description First of all, since the use of mouse models for the project undertaken was unavoidable, we have then invested in ex-vivo state-of-the-art technologies and developed and applied new methodologies to elucidate fundamental mechanisms regulating movement in health and dysfunction during ageing. These methods have been published and will benefit researchers tackling questions where quantitative and genome-wide interrogation of particular brain cell types are needed to study adult or aged mouse brains. Moreover, because this technology allows increasing the yield, for example, of the type of cells of interest without a change in animal procedures, it also implements the principles of the 3Rs (Replacement, Reduction and Refinement) about science. Finally, using this technology, we have successfully identified a novel key player involved in a cell-protective pathway associated with age-dependent motor impairment. The knowledge acquired is being disseminated through, for example, conferences and, in part already through peer-reviewed publications. The long-term impact and further validation of the novel factor discovered with this project will potentially lead to identifying a novel therapeutic target of interest to the pharmaceutical industry as having potential clinical relevance.
First Year Of Impact 2017
Sector Education,Other
Impact Types Cultural

 
Description Regulation of the time-sensitive period in neuronal circuit development by NTRK2/TrkB signalling.
Amount £548,415 (GBP)
Funding ID MR/W005166/1 
Organisation Medical Research Council (MRC) 
Sector Public
Country United Kingdom
Start 11/2021 
End 10/2024
 
Title Microfluidic gene expression analysis from limited number of adult and aged central neurons 
Description This is an alternative method that interrogates the transcriptional state of cells and is able to detect gene expression in rare single cells or bulk cells with high sensitivity. We have optimized this method to study or validate RNA sequencing data from a limited number of adult and aged sorted neurons. 
Type Of Material Technology assay or reagent 
Year Produced 2017 
Provided To Others? Yes  
Impact This optimized method allows to reduce the number of experimental animals considerably. Previous methods used for neuronal gene profiling required large cohorts, whereas this method requires only a minimal number of biological replicates (3 to 4 mice). 
URL https://pharm.ox.ac.uk/research/michiello-group-cellular-and-molecular-neuroscience
 
Title Optimization of high-throughput gene expression profiling for adult and aged central nervous system neurons 
Description In contrast to previous methods used for neuronal gene profiling that required large cohorts to be performed, we have optimized a protocol that can be used for high-throughput gene expression profiling from limited numbers of adult or aged brain neurons. 
Type Of Material Technology assay or reagent 
Year Produced 2017 
Provided To Others? Yes  
Impact This protocol has reduced the number of experimental animals to as few as 3-4 mice (the minimal number of biological replicates). This method will benefit a wide range of neuroscientists interested in the molecular characterization of mature CNS neuron subtypes (from an intact or diseased brain) otherwise inaccessible. 
URL https://pharm.ox.ac.uk/research/michiello-group-cellular-and-molecular-neuroscience
 
Description Bioinformatics data analysis 
Organisation University of Oxford
Country United Kingdom 
Sector Academic/University 
PI Contribution Transcriptome analysis of purified neurons using RNA sequencing
Collaborator Contribution Differential gene expression analysis between multiple samples, and gene ontology to identify affected pathways/processes
Impact There is one publication resulting from this collaboration.
Start Year 2015
 
Description Purification of neurons for transcriptome analysis using RNA sequencing 
Organisation University of Oxford
Country United Kingdom 
Sector Academic/University 
PI Contribution Generation of accurate mouse model carrying both the fluorescent reporter allele and specific Trkb deletion in striatal neurons to allow isolation of a pure population of striatal neurons for transcriptome analysis
Collaborator Contribution Cell sorting of adult and aged neurons
Impact There are two papers resulting from this collaboration.
Start Year 2014