Interrogation of the role of transient interneuron circuits in the development of normal sensory activity in vivo.

Lead Research Organisation: University of Oxford
Department Name: Physiology Anatomy and Genetics

Abstract

A major obstacle to our understanding of brain function is the sheer diversity and number of cells that contribute to even the simplest of behaviours. One approach aims to tackle this problem by investigating the rules that govern the developing brain. The reasoning being that if we can understand the biology going on at early stages - processes that lay the foundations for the amazing processing power of our brains - then we can perhaps extrapolate them to the more complex adult brain. A further advantage of this approach is that it allows us to study and dissect the relative contribution of genetics and environment on brain formation, both of which combine to sculpt an individual's unique perception of the world. Yet even at these formative stages, amongst all the millions of nerve cells jostling for position there remains the question as to how an individual nerve cell in the developing brain know where to go and which other nerve cells it should form connections to? One particular cell type - local, inhibitory nerve cells termed interneurons, face a monumental task as their origin is completely distinct from their eventual site of function. To get round this challenge it appears that the migration and integration of these cells into the correct brain circuits is governed largely by genetic events. In essence they represent 'hard-wired' components of the circuit. Ongoing studies in the lab suggest that this is the case. We have used the power of genetics to interrogate the contribution of interneurons to emergent brain circuits and through these studies have revealed that certain subtypes of interneuron act as a scaffold for the developing brain, constraining the impact of the environment so that no matter what our early life experience are, should we have the right genetic programmes, our brain will end up with being 'normal'. Moreover just like a scaffold these particular interneuron circuits are transient and so we cannot study them in the adult brain. Unfortunately from then on the story is still largely incomplete and we have a limited knowledge of what function these interneurons actually have in the newborn brain. We believe that resolving this is critically important because this activity lays the foundation for all of our subsequent cognitive development. As such we want to determine (1) the exact contribution of interneurons to formative brain activity in the normal brain. We want to see if our scaffold interneurons change function as the brain develops; (2) we want to test if this scaffold is critical. We will achieve this by blocking formation of the scaffold by using genetics to promote the mature brain state earlier in development; before (3) altering directly the performance of the transient network at discrete stages through development and assessing the consequences on network maturation. Our belief is that the latter will demonstrate the importance of this early transient interneuron circuit to normal brain development.

Technical Summary

Inhibitory interneurons of the cerebral cortex are fundamental not only to normal adult cognitive function but have also been proposed to play a critical role in circuit formation. In recent experiments we have taken advantage of an approach that combines developmental genetics, physiology and optogenetics to probe the contribution of individual interneuron subtypes to the emergent networks. A key finding from these studies has been the identification of a number of transient interneuron circuits in the early postnatal neocortex. These include one pathway mediated by somatostatin-positive (SST+) interneurons in infragranular layers of neocortex that appears critical for the timely acquisition of thalamocortical input and that is absent in a mouse model (transgenic over-expression of neuregulin-1) wherein local inhibition mediated by PV+ interneurons is promoted. To better understand the contribution of such pathways and resolve how different sources of inhibition sculpt emergent brain function we propose to use a range of optical and electrophysiological approaches in vivo to resolve the contribution of GABAergic interneuron subtypes to early oscillatory activity in primary somatosensory cortex of first wild-type and second Nrg1-overexpressing transgenic animals. Our objectives are 4-fold: (1) to identify the contribution of different interneuron subtypes to normal development; (2) determine if Nrg1 transgenic animal exhibit altered levels of interneuron recruitment in vivo; (3) to assess how imbalances in translaminar versus local inhibition alter early postnatal oscillations and if so, how interneurons contribute to altered activity; (4) determine the temporal requirement for each interneuron subtypes using conditional cell silencing strategies including chemo-genetics. The sum of these experiments should provide additional insight into early circuit events and identify how discrete population of inhibitory interneuron underpin emergent normal cognitive function.

Planned Impact

The current proposal represents a continuation of the work originally funded by the MRC (MR/K/004387/1); a study that used developmental genetics and laser scanning photostimulation (LSPS) to map the circuitry of the developing neocortex in normal and mutant brains. During this investigation we identified a number of early transient circuits that are distinct from those present in the adult brain. We found a hitherto unknown pathway present during the critical period plasticity which dictates the timeline for normal sensory integration and is absent in the more mature circuits. The intention is to now explore this circuit in vivo and directly test the requirement for this early pathway in the establishment of normal sensory awareness. At a basic level this represents an investigation into the importance of 'nature versus nurture' in brain development and as such will greatly inform our understanding of cortical circuits through life. Our investigation will identify how specific interneuron subtypes - that act as a scaffold for emergent mature connections - contribute to network activity and ultimately better understand the importance of these early circuits in the development of the normal brain. As such the initial impact of our findings will be felt by the immediate neuroscience community focused on neurodevelopment, GABAergic interneurons and more generally circuitry of the juvenile and adult cerebral cortex. This will include researchers working in both basic and clinical neuroscience who investigate normal and dysfunctional cognitive performance. One of the core advances of this proposal - which we believe will have an impact of future research across these fields - is to meld in vivo physiology with LSPS to provide a link between network activity and synaptic integration at the cellular level. In addition, while we routinely exploit developmental genetics to identify cortical interneuron subtypes, the thought is to further extend this strategy to selectively silencing and interrogation of the role of interneurons subtypes to early behaviour. Such approaches have not been exploited previously in neonates as such our results will act as a proof of principle for further investigation.
We envisage that our data will promote better understanding of the aetiology of a wide range of neurological conditions (including autism, schizophrenia and bipolar disorder) in which GABAergic interneuron synaptic dysfunction have been implicated. Our recent data suggest that an appreciation of transient interneuron circuits will be necessary if we are to resolve the causative factors for such conditions. Moreover it suggests that the deficits that underpin these conditions in neonatal circuits might be quite distinct from the phenotype observed in juvenile/adults. Identification of early circuit dynamics will advance our understanding and could lead to (1) a better appreciation of pre-symptomatic events and (2) the development of alternative strategies to target early circuit abnormalities. To maximize the potential impact of our findings we will develop closer collaboration with colleagues in the Dept. of Psychiatry and in Clinical Neuroscience to consider how best to exploit and disseminate our basic science findings within the clinical arena. This is a priority area for our future engagement given the impact such neurological disorders have on the community across the lifespan of the individual concerned. There is a real need to place our understanding of environmental and genetic factors linked to such disorders within a better model of circuit development. As such this is an area where we believe the research proposed will have its greatest longer term impact.

Publications

10 25 50
 
Description We are interesting in the impact of nature (genes) versus nurture (environment) in brain development. We believe that there is a physiological scaffold present in the developing brain that acts to constrain the impact of nurture and ensure that our brains develop normally. Our recent findings have identified:

(1) such a scaffold exists.
(2) sensory activity is not required for the formation of the scaffold.
(3) the components of the scaffold differ according to sensory modality i.e. the scaffold in the area of the brain involved in touch differs from that used in vision.

Our current hypothesis is that these differences in scaffold components might lead to different symptoms and psychiatric manifestations associated with neurodevelopmental disorders ranging from autism to schizophrenia.
Exploitation Route We have identified how the scaffolds are impacted during normal and dysfunctional brain development. We believe that this will greatly inform our understanding of the aetiology of neurodevelopmental disorders.
Sectors Education,Healthcare,Pharmaceuticals and Medical Biotechnology

 
Title 2P recording from neonatal mice 
Description This method allows us to image a population of active neurons in the neonatal brain in vivo. 
Type Of Material Improvements to research infrastructure 
Year Produced 2018 
Provided To Others? No  
Impact This method allows us to track the activity of a large populations of neurons over a relatively large area in the brain, thus allowing us to investigate the activity of large networks of neurons. 
 
Title 3-photon imaging 
Description 3-photon in vivo imaging 
Type Of Material Improvements to research infrastructure 
Year Produced 2020 
Provided To Others? Yes  
Impact None at present 
 
Title Endoscope 1p recordings 
Description I travelled to Zurich to learn how to make and use endoscopes. 
Type Of Material Improvements to research infrastructure 
Year Produced 2017 
Provided To Others? Yes  
Impact This will allow us to possibly easily record calcium activity in neonates. 
 
Title Intrinsic optical imaging in neonatal mice 
Description By imaging bloodflow to the mouse barrel cortex by the reflection of light from a red LED, the precise location of barrels corresponding to specific whiskers could be assessed and used for further implantation of electrodes, or the measure an objective measure of blood flow to that area. 
Type Of Material Improvements to research infrastructure 
Year Produced 2018 
Provided To Others? No  
Impact This tool allows more precise implantations, thus reducing the number of animals used. It also allows to measure bloodflow to active areas of the brain. 
 
Title Patch-seq 
Description We are currently developing Patch sequencing in the lab to enable genomic analysis of recorded neurons 
Type Of Material Technology assay or reagent 
Year Produced 2018 
Provided To Others? No  
Impact None at present 
 
Title Silicon probe recordings from neonatal mice 
Description This method allows recording from neonatal mice while administering various sensory stimuli, thus associating unit activity with behaviour. 
Type Of Material Improvements to research infrastructure 
Year Produced 2018 
Provided To Others? No  
Impact This development allows to record single neurons in a live neonatal mouse. 
 
Title In silico developing brain 
Description We are developing an in silico model of the developing brain to assist experimental design 
Type Of Material Computer model/algorithm 
Year Produced 2018 
Provided To Others? No  
Impact The model will be released to the research community once completed. 
 
Description 3-photon imaging of cortical activity 
Organisation Scientifica UK
Country United Kingdom 
Sector Private 
PI Contribution Hosting and testing a 3-photon platform
Collaborator Contribution Provision of equipment
Impact Application to BBSRC to further pioneer this advanced technology
Start Year 2019
 
Description In vivo approaches to understanding brain development 
Organisation University of Oxford
Department Department of Pharmacology
Country United Kingdom 
Sector Academic/University 
PI Contribution We are developing novel in vivo approaches to record and dissect the contribution of GABAergic interneurons to neonatal brain activity.
Collaborator Contribution Our partners use similar approached to look in the adult brain. They are providing technical expertise and advice which we adapt to neonates.
Impact We currently have functional in vivo electrophysiology and have piloted in vivo imaging. 2022: We have developed longitudinal in vivo imaging of neonates
Start Year 2017
 
Description Investigation of the effect of genetic perturbation of VIP+ interneurons during and beyond postnatal development 
Organisation University of Oxford
Department Department of Physiology, Anatomy and Genetics
Country United Kingdom 
Sector Academic/University 
PI Contribution Investigation of the changes in local and long range connectivity in early postnatal development after genetic perturbation of VIP+ interneurons using laser scanning photostimulation and an optogenetic viral approach.
Collaborator Contribution Investigation of the effect of genetic perturbation of VIP+ interneurons in adulthood during a sensory discrimination task.
Impact Early stages, no relevant outcomes at present
Start Year 2018
 
Description Patch-seq of developing GABAergic interneurons 
Organisation Karolinska Institute
Country Sweden 
Sector Academic/University 
PI Contribution Expertise in whole cell patch clamp and basic sequencing resources
Collaborator Contribution Sequencing and computational analysis
Impact 2022: SB travelled to Karolinska Institutet (KI; Stockholm) along with student IL to acquire skillset. 2023: Collaboration with team at KI and Oxford Genomics has yielded successful results.
Start Year 2018
 
Description Patch-seq of developing GABAergic interneurons 
Organisation University of Oxford
Department Oxford Genomics Centre
Country United Kingdom 
Sector Academic/University 
PI Contribution Expertise in whole cell patch clamp and basic sequencing resources
Collaborator Contribution Sequencing and computational analysis
Impact 2022: SB travelled to Karolinska Institutet (KI; Stockholm) along with student IL to acquire skillset. 2023: Collaboration with team at KI and Oxford Genomics has yielded successful results.
Start Year 2018
 
Description VIP interneurons 
Organisation University of Oxford
Department Department of Physiology, Anatomy and Genetics
Country United Kingdom 
Sector Academic/University 
PI Contribution Characterization and recording of early VIP interneurons, focusing on local and long range connectivity analysis, together with a focus on their role in early sensory processing.
Collaborator Contribution Access to genetically modify resources, Laser Scanning Photostimulation equipment
Impact Early stages, no relevant outcomes at present
Start Year 2015
 
Description BNA Dublin 2019 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Invited speaker BNA symposium in Dublin
Year(s) Of Engagement Activity 2019
URL https://meetings.bna.org.uk/bna2019/
 
Description Brain awareness week 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact A stand in the Oxford natural history museum, trying to present different aspects of the brain.
Year(s) Of Engagement Activity 2018
 
Description Conference Poster presentation 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact I presented my work at the FENS forum to fellow scientists.
Year(s) Of Engagement Activity 2018
 
Description FENS 2018 - Berlin 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Chaired and gave a talk at a symposium on early sensory activity in neocortex
Year(s) Of Engagement Activity 2018
URL https://forum2018.fens.org/
 
Description FENS Webinar 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Webinar on fundamental research into neurodevelopmental psychiatric disorders
Year(s) Of Engagement Activity 2021
URL https://www.fens.org/news-activities/news/online-webinar-brain-development-and-neuropsychiatric-diso...
 
Description Oxford Pathways programme 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Schools
Results and Impact One-hour academic taster session for a group of year 12 students who are considering studying medicine
Year(s) Of Engagement Activity 2018
URL https://www.pathways.ox.ac.uk/
 
Description Society for Neuroscience 2021 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Presentation of recent research findings
Year(s) Of Engagement Activity 2021
URL https://www.sfn.org/meetings/neuroscience-2021
 
Description University Medical Center Hamburg-Eppendorf 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Presented our recent research findings to researchers and clinicians based at University Medical Center Hamburg-Eppendorf. This led to considerable debate about the challenges of resolving interneuron function in normal and dysfunctional brain development.
Year(s) Of Engagement Activity 2019