Toll and kinase-less Trk receptors in concert drive a novel mechanism of structural synaptic plasticity.
Lead Research Organisation:
University of Birmingham
Department Name: Sch of Biosciences
Abstract
The nervous system changes throughout life, as neurons, neurites and synapses are generated and eliminated. Structural brain plasticity enables us to learn and adapt to change, and destructive change maintains structural homeostasis and integrity, enabling further adaptation. Such neuronal remodelling could be structural correlates of brain function. Thus, unravelling the relationship between structural plasticity/homeostasis and neuronal activity is a gateway to understanding how the brain works. The balance between structural plasticity and homeostasis is also essential for brain health, and its breakdown leads to brain tumours, neurodegeneration, motor and psychiatric disorders. Conversely, increasing brain plasticity is a key strategy to tackle brain disease. Brain disease constitutes the greatest disease burden in Europe, costing over double of cancer and cardiac diseases put together. Most brain diseases - from anxiety and depression, to epilepsy, autism, neurodegeneration, e.g. Alzheimer's and Parkinson's diseases, and neuroinflammation - involve problems with the neurotrophins (NTs) and/or Toll-Like-Receptors (TLRs). NTs are key plasticity factors, and promote neuronal survival, connectivity, synaptic formation, learning and long-term memory, through Trk receptors and tyrosine kinase signaling downstream. However, paradoxically, the most abundant Trk isoforms in the human adult brain lack the tyrosine kinase, but their neuronal functions are unknown. TLRs are best known for underlying innate immunity. TLRs are also found in all neurons, however their neuronal functions are largely unknown, and their ligands in the brain are also unknown. Altogether, the molecular mechanisms regulating nervous system structural plasticity and homeostasis are little understood. Discovering novel mechanisms to enhance brain plasticity is an urgent neuroscience goal.
We recently discovered a previously unforeseen relationship between NTs, kinase-less Trk and Toll receptors in the central nervous system (CNS) of the fruit-fly, Drosophila. There are no full-length Trks in Drosophila, and instead, Trk homologues encoded by the kekkon (kek) genes lack the tyrosine kinase. Thus, Drosophila offers a golden opportunity to investigate the functions of truncated Trk receptors in vivo. The fruit-fly is the most powerful model organism for functional genetic analysis in vivo, offering from neural circuit to synaptic resolution and behaviour.
We discovered that Drosophila neurotrophins (DNTs) bind Toll receptors to regulate neuronal number, connectivity and behaviour, and bind Keks to promote structural synaptic plasticity, e.g. synaptic bouton formation and axonal arbor complexity. We suspect they also function together. We hypothesize that a feedback loop between pre- and post-synaptic cells, involving post-synaptic translation of DNT2 and a Kek-Toll receptor complex, modulates synaptic function and promotes structural changes in neurons in response to neuronal activity. We will test this hypothesis at the glutamatergic neuromuscular junction (NMJ) of the Drosophila larva by: (1) Determining the mechanism of Kek-6 action, validating candidates we have identified. (2) Working out how Keks and Tolls interact, and resolving the Kek-Toll code. As there are multiple Keks and Tolls, distinct pairs could be characteristic of neuronal type, or of distinct responses to neuronal activity by dendrites and axons. (3) We will select 2-3 Kek-Toll pairs with their downstream factors, to test whether and how they modulate synaptic function and structural changes in neurons in response to neuronal activity.
The outcome will be the identification of a novel, unanticipated molecular mechanism for nervous system structural plasticity. Even if not all details were to be evolutionarily conserved in humans, our framework will provide compelling and incisive predictions to test in rodents, for the benefit of understanding the human CNS, in health and disease.
We recently discovered a previously unforeseen relationship between NTs, kinase-less Trk and Toll receptors in the central nervous system (CNS) of the fruit-fly, Drosophila. There are no full-length Trks in Drosophila, and instead, Trk homologues encoded by the kekkon (kek) genes lack the tyrosine kinase. Thus, Drosophila offers a golden opportunity to investigate the functions of truncated Trk receptors in vivo. The fruit-fly is the most powerful model organism for functional genetic analysis in vivo, offering from neural circuit to synaptic resolution and behaviour.
We discovered that Drosophila neurotrophins (DNTs) bind Toll receptors to regulate neuronal number, connectivity and behaviour, and bind Keks to promote structural synaptic plasticity, e.g. synaptic bouton formation and axonal arbor complexity. We suspect they also function together. We hypothesize that a feedback loop between pre- and post-synaptic cells, involving post-synaptic translation of DNT2 and a Kek-Toll receptor complex, modulates synaptic function and promotes structural changes in neurons in response to neuronal activity. We will test this hypothesis at the glutamatergic neuromuscular junction (NMJ) of the Drosophila larva by: (1) Determining the mechanism of Kek-6 action, validating candidates we have identified. (2) Working out how Keks and Tolls interact, and resolving the Kek-Toll code. As there are multiple Keks and Tolls, distinct pairs could be characteristic of neuronal type, or of distinct responses to neuronal activity by dendrites and axons. (3) We will select 2-3 Kek-Toll pairs with their downstream factors, to test whether and how they modulate synaptic function and structural changes in neurons in response to neuronal activity.
The outcome will be the identification of a novel, unanticipated molecular mechanism for nervous system structural plasticity. Even if not all details were to be evolutionarily conserved in humans, our framework will provide compelling and incisive predictions to test in rodents, for the benefit of understanding the human CNS, in health and disease.
Technical Summary
The aim is to test the hypothesis that a recently discovered molecular mechanism promotes neuronal activity dependent structural plasticity, to deliver appropriate behaviour. In humans, neurotrophins (NTs) modulate synaptic and structural plasticity via the tyrosine kinase function of the receptor TrkB. Paradoxically, the most abundant TrkB isoforms in the adult human brain lack the tyrosine kinase, but their neuronal functions are unknown. Toll-Like-Receptors could also be involved in brain plasticity, but their neuronal functions remain unknown.
We discovered that Drosophila neurotrophins (DNTs) bind Toll and kinase-less Trk-family receptors encoded by the kekkon (kek) genes. DNT2 is a retrograde ligand for a pre-synaptic receptor complex formed of Kek-6 and Toll-6 that together regulate neuronal number, synaptic structure and arbor growth. We suspect that they modulate synaptic function and respond to neuronal activity to mould structural changes in neurons to functional requirements. We will test this idea in the Drosophila larva by: (1) Determining the molecular mechanism of Kek-6 function. We have identified 13 candidate effectors. Using optogenetics, GCaMP calcium imaging, genetics and co-immunoprecipitations, we will validate 1- 5. (2) Cracking the Kek-Toll code. Kek-6 and Toll-6 signalling can cross-talk downstream, and using genetic epistasis analysis, confocal and expansion microscopy at the neuromuscular junction (NMJ), we will test the effect on synaptic structure. With image registration to the connectome, we will see whether different Keks and Tolls are in different motorneuron types, dentrite vs. axonal arbors, or whether they overlap. (3) We will select 2-3 Kek-Toll pairs to investigate at NMJ or dendrite. Using electrophysiology, opto- and thermo-genetics, to examine, activate and silence neurons, genetics to switch genes on or off and microscopy, we will test how these mechanisms affect activity-dependent structural plasticity and behaviour.
We discovered that Drosophila neurotrophins (DNTs) bind Toll and kinase-less Trk-family receptors encoded by the kekkon (kek) genes. DNT2 is a retrograde ligand for a pre-synaptic receptor complex formed of Kek-6 and Toll-6 that together regulate neuronal number, synaptic structure and arbor growth. We suspect that they modulate synaptic function and respond to neuronal activity to mould structural changes in neurons to functional requirements. We will test this idea in the Drosophila larva by: (1) Determining the molecular mechanism of Kek-6 function. We have identified 13 candidate effectors. Using optogenetics, GCaMP calcium imaging, genetics and co-immunoprecipitations, we will validate 1- 5. (2) Cracking the Kek-Toll code. Kek-6 and Toll-6 signalling can cross-talk downstream, and using genetic epistasis analysis, confocal and expansion microscopy at the neuromuscular junction (NMJ), we will test the effect on synaptic structure. With image registration to the connectome, we will see whether different Keks and Tolls are in different motorneuron types, dentrite vs. axonal arbors, or whether they overlap. (3) We will select 2-3 Kek-Toll pairs to investigate at NMJ or dendrite. Using electrophysiology, opto- and thermo-genetics, to examine, activate and silence neurons, genetics to switch genes on or off and microscopy, we will test how these mechanisms affect activity-dependent structural plasticity and behaviour.
Planned Impact
Who might benefit from this research?
Beneficiaries will be: (1) Scientists working with Drosophila, mammalian model organisms or humans, on brain development, structural brain plasticity, brain diseases including neurodegeneration, neuroinflammation, ageing, stem cell and regenerative biology. (2) Protected animals, by implementing the "3Rs: replacing protected animals with invertebrate models", as only Drosophila will be used to address questions relevant to mammals including humans. (3) The BBSRC: this project meets the BBSRC Strategic Priorities of "Driving bioscience discovery" and "Frontier Bioscience"; the Strategic Research Priority 3 "Biosciences for health: generate new knowledge on the mechanisms of development and the maintenance of health across the life-course; generate new knowledge to advance regenerative biology, including stem cells and tissue engineering research; improve our understanding of how the ageing process results in increased frailty and loss of adaptability in areas such as brain, immune and sensory systems", the Responsive Mode Priority area of "Healthy ageing across the life-course", and the over-arching priority "3Rs: Replacement, Refinement and Reduction in research using animals". (4) The appointed post-doctoral researcher and technician will benefit from employment and training. (5) Potential BBSRC MIBTP post-graduate students will benefit from training in research.
How might they benefit from this research?
The project aims are of global importance: to discover genetic mechanisms to promote central nervous system (CNS) structural plasticity to maintain or restore health in ageing, and upon disease. We will provide a molecular framework of how neuroprotective neurotrophin ligands signaling through innate immunity Toll and kinase-less truncated-Trk-like receptors regulate structural changes in the CNS, to promote plasticity and counteract neurodegeneration. The findings will help scientists using mammals develop drugs to influence these pathways in vivo, to treat brain disease, from psychiatric to neurodegenerative and restore brain health. The Academic community and general society will benefit from scientific discoveries into CNS plasticity. Our findings will be disseminated at conferences and Open Access peer reviewed research articles.
The BBSRC will benefit from funding internationally competitive research in world-class bioscience on regenerative neurobiology and healthy ageing. The project uses the fruit-fly Drosophila as a model organism, but it will result in discoveries with important long-term implications for the understanding and treatment of diseases of nervous system, brain damage and how ageing impacts on immune, cognitive, motor ans sensory systems. The BBSRC will benefit from increased international collaboration, as this project involves collaborators: Prof R.Baines (University of Manchester, UK), Dr M.Landgraf (University of Cambridge, UK), Dr M.Zlatic (Janelia Research Campus, USA), Prof B.Gerber (Liebniz Institut für Neurobiologie, Germany). AH also collaborates with Prof. A Logan (University of Birmingham) and Dr F Matsuzaki (Riken, Japan) using rodents, and NJG with Prof. C Bryant and Dr M Gangloff (University of Cambridge), investigating mammalian Toll-Like Receptors. AH's links to the consortia for Neuroscience and Ophthalmology, closely linked to the University Queen Elisabeth Hospital, and Centre for Human Brain Health at the University of Birmingham, and NJG's links to Drug Discovery at the University of Cambridge, offer unique opportunities to translate fundamental research findings into medicine.
UK and other countries will benefit from skilled researchers resulting from this project (including PhD and Master students).
The general public will benefit from our outreach events, e.g. school visits, "Brain awareness week", "British Science Festival" and "Community Day", where we will explain to the public our BBSRC funded research.
Beneficiaries will be: (1) Scientists working with Drosophila, mammalian model organisms or humans, on brain development, structural brain plasticity, brain diseases including neurodegeneration, neuroinflammation, ageing, stem cell and regenerative biology. (2) Protected animals, by implementing the "3Rs: replacing protected animals with invertebrate models", as only Drosophila will be used to address questions relevant to mammals including humans. (3) The BBSRC: this project meets the BBSRC Strategic Priorities of "Driving bioscience discovery" and "Frontier Bioscience"; the Strategic Research Priority 3 "Biosciences for health: generate new knowledge on the mechanisms of development and the maintenance of health across the life-course; generate new knowledge to advance regenerative biology, including stem cells and tissue engineering research; improve our understanding of how the ageing process results in increased frailty and loss of adaptability in areas such as brain, immune and sensory systems", the Responsive Mode Priority area of "Healthy ageing across the life-course", and the over-arching priority "3Rs: Replacement, Refinement and Reduction in research using animals". (4) The appointed post-doctoral researcher and technician will benefit from employment and training. (5) Potential BBSRC MIBTP post-graduate students will benefit from training in research.
How might they benefit from this research?
The project aims are of global importance: to discover genetic mechanisms to promote central nervous system (CNS) structural plasticity to maintain or restore health in ageing, and upon disease. We will provide a molecular framework of how neuroprotective neurotrophin ligands signaling through innate immunity Toll and kinase-less truncated-Trk-like receptors regulate structural changes in the CNS, to promote plasticity and counteract neurodegeneration. The findings will help scientists using mammals develop drugs to influence these pathways in vivo, to treat brain disease, from psychiatric to neurodegenerative and restore brain health. The Academic community and general society will benefit from scientific discoveries into CNS plasticity. Our findings will be disseminated at conferences and Open Access peer reviewed research articles.
The BBSRC will benefit from funding internationally competitive research in world-class bioscience on regenerative neurobiology and healthy ageing. The project uses the fruit-fly Drosophila as a model organism, but it will result in discoveries with important long-term implications for the understanding and treatment of diseases of nervous system, brain damage and how ageing impacts on immune, cognitive, motor ans sensory systems. The BBSRC will benefit from increased international collaboration, as this project involves collaborators: Prof R.Baines (University of Manchester, UK), Dr M.Landgraf (University of Cambridge, UK), Dr M.Zlatic (Janelia Research Campus, USA), Prof B.Gerber (Liebniz Institut für Neurobiologie, Germany). AH also collaborates with Prof. A Logan (University of Birmingham) and Dr F Matsuzaki (Riken, Japan) using rodents, and NJG with Prof. C Bryant and Dr M Gangloff (University of Cambridge), investigating mammalian Toll-Like Receptors. AH's links to the consortia for Neuroscience and Ophthalmology, closely linked to the University Queen Elisabeth Hospital, and Centre for Human Brain Health at the University of Birmingham, and NJG's links to Drug Discovery at the University of Cambridge, offer unique opportunities to translate fundamental research findings into medicine.
UK and other countries will benefit from skilled researchers resulting from this project (including PhD and Master students).
The general public will benefit from our outreach events, e.g. school visits, "Brain awareness week", "British Science Festival" and "Community Day", where we will explain to the public our BBSRC funded research.
Publications

Li G
(2020)
A Toll-receptor map underlies structural brain plasticity.
in eLife

Li G
(2020)
Adult Neurogenesis in the Drosophila Brain: The Evidence and the Void.
in International journal of molecular sciences

Li G
(2021)
The Toll Route to Structural Brain Plasticity.
in Frontiers in physiology
Title | Looking into the brain of a fly |
Description | We made a 19minute long video film about life in the lab, how research using fruit-flies is carried out. We also made altogether 19 shorter films (30sec-2min) explaining various research methods and summarising our research findings. These videos were placed in a YouTube channel we made for my lab. Please visit: https://www.youtube.com/channel/UCGpMASU7wU40O2xrDIXTVrw |
Type Of Art | Film/Video/Animation |
Year Produced | 2021 |
Impact | The videos and YouTube channel have attracted many viewers. |
URL | https://www.youtube.com/channel/UCGpMASU7wU40O2xrDIXTVrw |
Title | The 3D-printed fruit-fly |
Description | In collaboration with an artist, we have designed: (1) a 30cm fruit-fly with anatomical precision, and 3D printed it in plastic. Wings and eyes have been made in two different genotypes. They are held together on the fly with magnets and can be swapped to explain the principles of genetics. We have been using for our outreach events for the public and it has been very successful. (2) a 3D-printed fruit-fly brain, also 30cm long. Brain modules are linked together with magnets, and can be disassembled like a 3D puzzle to explain the structure of the brain to researchers, students and public. (3) We are currently making a smaller version of the fruit-fly, more practical for schools. |
Type Of Art | Artefact (including digital) |
Year Produced | 2018 |
Impact | The 3D-printed fruit-fly will be used at outreach events for the general public and to make videos explaining the power of Drosophila genetics for biomedical research. This has resulted in over 750 likes in twitter, and multiple views of our videos in YouTube: https://www.youtube.com/channel/UCGpMASU7wU40O2xrDIXTVrw |
URL | https://more.bham.ac.uk/hidalgo/3-d-printed-fruit-fly/ |
Title | Why fruit-flies? |
Description | 5 minute video on the power of Drosophila genetics for biomedical research |
Type Of Art | Film/Video/Animation |
Year Produced | 2021 |
Impact | This video has been placed in multiple website and keeps attracting viewers: (1) my lab website: https://more.bham.ac.uk/hidalgo/3-d-printed-fruit-fly/. (2) My lab's YouTube channel:https://www.youtube.com/watch?v=pFOzbmJMVhM&t=11s. (3) Birmingham Fly Facility website: https://www.birmingham.ac.uk/research/birmingham-fly-facility/outreach.aspx. and (4) Brain Awareness Week 2021 https://www.youtube.com/watch?v=GHyXS3967_c&t=8s |
URL | https://more.bham.ac.uk/hidalgo/3-d-printed-fruit-fly/ |
Description | We have discovered that a novel mechanism driven by the Toll receptor family underlies structural brain plasticity. Structural brain plasticity reflects the ability of the brain to change throughout the life course. Normally, plasticity is in balance with structural homeostasis, which constrains plasticity, and together they maintain brain integrity whilst enabling it to respond to the environment. When homeostasis takes over, it can drive neurodegeneration and brain disease. The underlying mechanisms controlling the swing between plasticity and degeneration were unknown. We discovered that Toll receptors - best known for their involvement in innate immunity - control brain plasticity and neurodegeneration in the fruit-fly brain. The same mechanism could operate in the human brain. These findings were published in eLife: Guiyi Li, Manuel G Forero, Jill S Wentzell, Ilgim Durmus, Reinhard Wolf, Niki C Anthoney, Mieczyslaw Parker, Ruiying Jiang, Jacob Hasenauer, Nicholas James Strausfeld, Martin Heisenberg, Alicia Hidalgo (2020) "A Toll-receptor map underlies structural brain plasticity" eLife DOI: 10.7554/eLife.52743 We were invited to write two reviews on this discovery, published as: (1) Li, G and Hidalgo, A (2020) Adult neurogenesis in the Drosophila brain: the evidence and the void. IJMC 21(18), 6653. and (2) Li, G and Hidalgo, A (2021) A Toll route to structural brain plasticity. Frontiers in Physiology, DOI: 10.3389/fphys.2021.679766. We have work in progress: (1) investigation of Toll receptors in the larval neurodegenerative-muscular junction and their function in structural synaptic plasticity; (2) investigation of Kek receptors at the larval neuro-muscular junction and their function in regulating calcium and in structural synaptic plasticity. This work is in progress and we have not published findings yet. |
Exploitation Route | Others can get inspiration from our recent publication Li et al (2020) eLife DOI: 10.7554/eLife.52743. We have recently been invited to write two reviews: (1) Li G and Hidalgo A (2020) Adult neurogenesis in the Drosophila brain: the evidence and the void. International Journal of Molecular Sciences 21(18), 6653. (2) Li, G and Hidalgo, A (2021) A Toll route to structural brain plasticity. Frontiers in Physiology. These will make our findings known more widely. |
Sectors | Education,Healthcare,Pharmaceuticals and Medical Biotechnology |
URL | https://more.bham.ac.uk/hidalgo/ |
Description | So far, this grant has resulted in three publications: (1) Guiyi Li, Manuel G Forero, Jill S Wentzell, Ilgim Durmus, Reinhard Wolf, Niki C Anthoney, Mieczyslaw Parker, Ruiying Jiang, Jacob Hasenauer, Nicholas James Strausfeld, Martin Heisenberg, Alicia Hidalgo (2020) "A Toll-receptor map underlies structural brain plasticity". eLife DOI: 10.7554/eLife.52743. (2) Li G and Hidalgo A (2020) Adult neurogenesis in the Drosophila brain: the evidence and the void. International Journal of Molecular Sciences 21(18), 6653 (3) Guiyi Li and Alicia Hidalgo (2021) A Toll route to the plastic Drosophila brain. Frontiers in Physiology DOI: 10.3389/fphys.2021.679766. We have been engaged in outreach and public engagement activities. The Princes Teaching Institute: December 2018. I was invited to give a talk at a school teacher training workshop, organised by the Prince's Teaching Institute. The feedback received was outstanding: "The speakers were incredibly engaging and a great reminder of why I love my subject", "The speakers were really passionate and inspiring, and I feel I learnt a lot from them", "Speakers were great and the sessions were really useful and informative". We participated in Museum Lates: night at the ThinkTank Science Museum in Birmingham, with a talk for the public "Plastic Brains" by Alicia Hidalgo, and a hands-on event for the public "From tiny fruit-flies to great discoveries", 24 October 2019. We regularly participate in Brain Awareness Week, in Birmingham: 11-17 March 2019 at the ThinkTank Science Museum, and 22 March at the MAC. This is an international event to celebrate the importance of brain research. This year we have entitled it "Mysteries of the brain". During the covid-19 pandemic 2020-2021 we were not able to carry out outreach events for the public. So instead with my research team we carried out outreach activities online including: (1) we created a new website for my research https://more.bham.ac.uk/hidalgo/. (2) We made 19 videos to explain our research to the public and we created a YouTube channel for them: https://www.youtube.com/channel/UCGpMASU7wU40O2xrDIXTVrw. (3) We created two videos that we used for Brain Awareness Week online https://www.birmingham.ac.uk/research/centre-for-human-brain-health/events/2021/brain-awareness-week-2021.aspx In 2022, we have organised face-to-face events outreach events for the public again to celebrate Brain Awareness Week: (1) 19 March 2022 at The Midlands Art Centre and (2) 20 March 2022 at The ThinkTank Museum. |
First Year Of Impact | 2018 |
Sector | Education,Healthcare |
Impact Types | Cultural,Societal |
Description | External examiner in PhD theses |
Geographic Reach | Europe |
Policy Influence Type | Influenced training of practitioners or researchers |
Impact | Examination of PhD students, enabling them to become professional scientists. |
Description | Member of the University of Birmingham Senate, representing College of Life and Environmental Sciences and School of Biosciences |
Geographic Reach | Local/Municipal/Regional |
Policy Influence Type | Membership of a guideline committee |
Description | UKRI sLoLa committee 2022 |
Geographic Reach | National |
Policy Influence Type | Membership of a guideline committee |
Description | "Automatic quantification of cell number in the brain of Drosophila |
Amount | £75,000 (GBP) |
Funding ID | Marco Logico |
Organisation | Government of Colombia |
Sector | Public |
Country | Colombia |
Start | 09/2019 |
End | 10/2022 |
Description | "The 3D-Printed Fruit-fly take-off" |
Amount | £1,955 (GBP) |
Organisation | University of Birmingham |
Sector | Academic/University |
Country | United Kingdom |
Start | 01/2022 |
End | 03/2022 |
Description | Small 3D-printed fruit-fly" |
Amount | £1,973 (GBP) |
Organisation | University of Birmingham |
Sector | Academic/University |
Country | United Kingdom |
Start | 01/2022 |
End | 03/2022 |
Description | The 3D-printed fruit-fly |
Amount | £1,950 (GBP) |
Organisation | University of Birmingham |
Sector | Academic/University |
Country | United Kingdom |
Start | 12/2018 |
End | 11/2021 |
Description | Toll and kinase-less Trk receptors in concert drive a novel mechanism of structural synaptic plasticity. |
Amount | £475,100 (GBP) |
Funding ID | BB/R017034/1 |
Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
Sector | Public |
Country | United Kingdom |
Start | 08/2018 |
End | 08/2021 |
Title | New DeadEasy plugins to investigate brain plasticity |
Description | We develop several new DeadEasy plugins, to count automatically cell number in the adult brain of the fruit-fly Drosophila: (1) DeadEasy Optic Lobe; (2) DeadEasy Central Brain; (3) DeadEasy Kenyon Cells. These were used in the publication Li et al 2020 eLife. |
Type Of Material | Technology assay or reagent |
Year Produced | 2020 |
Provided To Others? | Yes |
Impact | This has only just been published, so impacts have not materialised yet. |
URL | https://elifesciences.org/articles/52743 |
Title | Transgenic Drosophila |
Description | We have generated various transgenic fruit-flies using CRISPR/Cas9 homologous recombination. This includes: UAS constructs to over-express spatzle genes; YPET tagged genes (eg kon, wek, spz); GAL4 driver lines and knock-outs. |
Type Of Material | Technology assay or reagent |
Year Produced | 2021 |
Provided To Others? | No |
Impact | These tools have been recently generated (2021, 2022) and they have not been used yet to generate data. They will form part of research articles and publications once they have been used and they work is ready for publication. |
Title | Novel DeadEasy plugins to investigate brain plasticity in Drosophila |
Description | We have generated novel DeadEasy plugin to investigate brain plasticity in Drosophila. They enable us to automatically count cells throughout the brain: (1) DeadEasy Optic lobes for smaller cells; (2) DeadEasy Central Brain; (3) DeadEasy Kenyon Cells, for tightly packed cells. These plugins have been used in our publication Li et al 2020 eLife |
Type Of Material | Computer model/algorithm |
Year Produced | 2020 |
Provided To Others? | Yes |
Impact | This has only just been published so impact still unknown |
URL | https://elifesciences.org/articles/52743 |
Description | "Automatic quantification of cell number in the brain of Drosophila" |
Organisation | University of Ibagué |
Country | Colombia |
Sector | Academic/University |
PI Contribution | Contribution by my team: biological research data. |
Collaborator Contribution | Contribution by collaborating team: software produced to analyse our data. |
Impact | Recent publication in eLife: Guiyi Li, Manuel G Forero, Jill S Wentzell, Ilgim Durmus, Reinhard Wolf, Niki C Anthoney, Mieczyslaw Parker, Ruiying Jiang, Jacob Hasenauer, Nicholas James Strausfeld, Martin Heisenberg, Alicia Hidalgo (2020) "A Toll-receptor map underlies structural brain plasticity" eLife DOI: 10.7554/eLife.52743 |
Start Year | 2018 |
Title | STL printing Designs for The 3D-printed fruit-fly |
Description | We generated a plastic fruit-fly, around 30cm long, with scientific precision for our outreach events. The designs for 3D printed are to be copyright protected. Licenses are being written now. We will be releasing the designs, subject to copyright, for download. |
IP Reference | |
Protection | Trade Mark |
Year Protection Granted | 2022 |
Licensed | No |
Impact | We have developed a 3D-Printed fruit-fly and fruit-fly brain. We have used the 3D-printed fruit-fly in multiple outreach events, for which it has been very successful. With University of Birmingham Enterprise Ltd we have created an online site for purchase and download of the STL files for 3D-printing, and to place orders of fully printed fruit-flies. This project was funded by two BBSRC-IAA/PEF awards. |
Title | DeadEasy Adult New |
Description | We have modified our previously developed DeadEasy Adult Glia to a version called "new" for more accurate cell counting in the Drosophila brain, in vivo. |
Type Of Technology | Software |
Year Produced | 2022 |
Impact | None yet, still using for research that is currently in progress. |
Title | DeadEasy Central Brain |
Description | DeadEasy Central Brain counts automatically in vivo all the nuclei in the Drosophila adult central brain, labelled with histone-YFP. Will count other nuclei of similar size, stained with nuclear markers. |
Type Of Technology | Software |
Year Produced | 2020 |
Impact | recently published in Li et al 2020 eLife |
URL | https://elifesciences.org/articles/52743 |
Title | DeadEasy Kenyon Cells |
Description | DeadEasy Kenyon Cells counts automatically in vivo the tightly packed cells of the mushroom bodies of Drosophila, labelled with histone-YFP. Will count other similar nuclei. |
Type Of Technology | Software |
Year Produced | 2020 |
Impact | recently published, impacts not materialised yet |
URL | https://elifesciences.org/articles/52743 |
Title | DeadEasy Optic Lobe |
Description | DeadEasy Optic Lobes counts automatically the many and tiny cell nuclei labelled with Histone-YFP of the Drosophila adult optic lobes, in 3D, in vivo. It will count other cells of similar size, visible with fluorescent nuclear markers. |
Type Of Technology | Software |
Year Produced | 2020 |
Impact | Published in Li et al 2020 eLife |
URL | https://elifesciences.org/articles/52743 |
Description | "From tiny fruit-flies to great discoveries" at Green Heart Celebrations |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Public/other audiences |
Results and Impact | Celebrations for the Green Heart at the University of Birmingham, June 2019 |
Year(s) Of Engagement Activity | 2019 |
Description | "Plastic Brains" at Museum Lates, ThinTank Museum and University of Birmingham |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Public/other audiences |
Results and Impact | Talk for the public on "Plastic brains" at an open night at the ThinkTank Science Museum, Birmingham |
Year(s) Of Engagement Activity | 2019 |
Description | Brain Awareness Week 2019 at the ThinkTank Museum, March 2019 |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Public/other audiences |
Results and Impact | "From tiny fruit-flies to great discoveries" celebration of international Brain Awareness Week. Outcome to increase public awareness of brain research |
Year(s) Of Engagement Activity | 2019 |
Description | Brain Awareness Week 2021 - Videos |
Form Of Engagement Activity | Engagement focused website, blog or social media channel |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Schools |
Results and Impact | We generated two videos for international Brain Awareness Week (March 2021): (1) One 5min video where I, Professor Alicia Hidalgo, explain the research carried out by my team; (2) One 19min video where my team describes their research. Target audience is 14-16 year olds, and the video is to be played at schools. We are releasing it on March 11, 2021 so we do not know of its impact yet. |
Year(s) Of Engagement Activity | 2021 |
URL | https://www.birmingham.ac.uk/research/centre-for-human-brain-health/events/2021/brain-awareness-week... |
Description | Brain Awareness Week 2022 |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Public/other audiences |
Results and Impact | Brain Awareness Week is an international event that aims to raise the awareness of research into brain health and brain disease. It is celebrated world-wide. I am the main organiser for the School of Biosciences and the Birmingham Drosophila Labs, and we run the celebrations together with the School of Psychology and Medical School from the University of Birmingham. This year, we will have two hands on events for the public: (1) 19 March 2022 at The Midlands Art Centre (MAC); (2) 20 March 2022 at The ThinkTank Science Museum. We will demonstrate to the public the importance of fruit-flies in research, explain how genetics research is carried out, the importance of genes for brain health and to investigate brain disease; we will bring microscopes, a 3D-printed fruit-fly (25cm) and a 3D-printed fruit-fly brain (30cm). We have carried out these events for many years now and the public engage tremendously. This year will be the first one since the pandemic in 2020. |
Year(s) Of Engagement Activity | 2022 |
URL | https://www.birmingham.ac.uk/research/centre-for-human-brain-health/events/2022/brain-awareness-week... |
Description | Debate from panel of scientists after showing a film, for Brain Awareness Week |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Public/other audiences |
Results and Impact | Panel discussion on concussion for Brain Awareness Week. Raising public awareness of brain research, and here focusing on stem cell research, brain damage, regeneration and repair. |
Year(s) Of Engagement Activity | 2020 |
Description | Hands-on science at Museum Lates, ThinkTank Science Museum and University of Birmingham, October 2019 |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Public/other audiences |
Results and Impact | "From tiny fruit-flies to great discoveries" Hands-on science at Museum Lates, ThinkTank Science Museum and University of Birmingham, October 2019 |
Year(s) Of Engagement Activity | 2019 |
Description | Open Days |
Form Of Engagement Activity | Participation in an open day or visit at my research institution |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Schools |
Results and Impact | I participated in Open Days at the University of Birmingham and Offer Holding Visitor Days, in February 2022 and March 2022. |
Year(s) Of Engagement Activity | 2022 |
Description | Open days and applicant visits at University of Birmingham |
Form Of Engagement Activity | Participation in an open day or visit at my research institution |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Undergraduate students |
Results and Impact | Open days and research talks in the lab to visiting applicants. |
Year(s) Of Engagement Activity | 2018,2019 |
Description | School Teacher Training |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Schools |
Results and Impact | I gave a talk at a Teacher Training Workshop organised by The Princes' Teaching Institute. The workshop took place at the Pimlico Academy, London. |
Year(s) Of Engagement Activity | 2018 |
Description | School Visit |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Schools |
Results and Impact | My research team spent a day at a secondary school (teenagers), talking about science and why using the fruit-fly Drosophila helps research, |
Year(s) Of Engagement Activity | 2018 |
Description | The 3D-Printed Fruit-fly |
Form Of Engagement Activity | Engagement focused website, blog or social media channel |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Other audiences |
Results and Impact | The 3D-Printed Fruit-fly: I lead 4 projects to develop 3D-Printing designs and plastic prints of: (1) a fruit-fly 25cm; (2) fruit-fly internal organs; (3) a smaller fruit-fly with internal organs 15cm; (4) fruit-fly brain 30cm. These are all modular, each module held by magnets. They can be disassembled to understand the structure of the brain, genetic markers and explain the principles of genetics. We have made multiple videos using these models already which can be seen in my website (https://more.bham.ac.uk/hidalgo/3-d-printed-fruit-fly/) and in my YouTube channel (https://www.youtube.com/channel/UCGpMASU7wU40O2xrDIXTVrw). We use these models in our outreach events, people can hold them. We have also made images and posters explaining the internal anatomy of the fruit-fly and the fruit-fly brain. The images, posters and designs will be available for download soon. |
Year(s) Of Engagement Activity | 2022 |