Molecular up-cycling: bio-transforming waste plastic into value-added products

Lead Research Organisation: University of Edinburgh
Department Name: Sch of Biological Sciences

Abstract

It is estimated that 8 million tonnes of plastic waste end up in the oceans each year and that by 2050 there could be more plastic in the seas by weight than fish. This plastic is both incredibly dangerous to marine ecosystems and also sequesters materials prepared from non-renewable fossil fuels, with just ~14% currently being recycled globally each year. It has been estimated that recycling the remaining 86% of plastics could generate up to $120bn, but new methods and processes to transform waste plastic into value-added products must be developed in order to realise this potential. The proposed research will focus on polyethylene terephthalate (PET) as a feedstock for a bio-based 'molecular up-cycling' platform to produce value-added, industrially relevant small molecules. PET accounts for 15% of plastic waste in the UK, out of which ~60% is accounted for by synthetic fibres and 30% by plastic bottles, whilst other uses include plastic wrappers and films and thermoforming for manufacturing. Although chemical and thermal methods for PET recycling are well-established, there is a dramatic loss in value throughout the plastic life-cycle, with the value of the waste PET bottles being 86% lower than the virgin polymer.

This Fellowship proposal unites cutting edge research from both the chemical and biological sciences to transform waste PET into high-value small molecules. The research will address the global plastic waste disaster twofold by (i) decreasing the amount of plastic waste deposited in the environment in the future and (ii) transforming pre-existing, low-value waste products into industrially relevant, value-added products via a new 'molecular up-cycling' process. The research will be organised into two phases. Initially, a robust and efficient plastic degradation process will be developed. This will exploit PET degrading enzymes that have been isolated from microbes found in landfill sites, which have evolved to use PET as a carbon source for growth. In the second phase, the PET degradation technology will be integrated with 'microbial cell factories', which we will genetically programme to turn the degradation products of PET into industrially relevant small molecules. The initial target of the project will be the synthesis of vanillin - the primary extract from the vanilla bean and the primary molecule responsible for the characteristic smell and taste of vanilla. Vanillin is used extensively for flavours and fragrances and is also a valuable intermediate in the production of fine chemicals such as pharmaceuticals. As such, it has huge commercial value, with the global market for vanillin estimated to reach $724.5 million by 2025. Beyond this, the project also holds great potential for the production of a range of other high-value small molecules which are accessible through developing and integrating novel, bio-compatible chemical reactions with the PET degradation system. Such compounds include pharmaceuticals, fragrance/flavouring compounds, agrochemicals and polymers. As such, it is anticipated that this project will have significant academic and industrial value, as well having a positive impact on the environment by removing plastic waste from the natural environment.

Technical Summary

The proposed research will focus on poly(ethylene terephthalate) (PET) as a feedstock for a bio-based 'molecular up-cycling' platform to produce value-added, industrially relevant small molecules from plastic waste. PET accounts for 15% of plastic waste in the UK, out of which ~60% is accounted for by synthetic fibres and 30% by plastic bottles, whilst other uses include wrappers, films and thermoforming for manufacturing. Although chemical and thermal methods for PET recycling are well-established, there is a dramatic loss in value throughout the plastic life-cycle, with the value of the waste PET bottles being 86% lower than the virgin polymer. The research will be organised into two phases: (1) The development of a robust and efficient plastic biodegradation process and (2) Integration of plastic degradation with in vivo engineered pathways and biocompatible chemistry for the production of value-added small molecules, with an initial focus on the production of vanillin. Our strategy for Phase 1 is to express a PET hydrolase (PETase) on the surface of an E. coli biofilm, which will be used as a biocatalyst presentation platform. In Phase II of the project, the PET degradation system will be integrated with engineered in vivo pathways for the production of high-value small molecules, with an initial focus on vanillin. This multi-disciplinary research will draw on advances in metabolic engineering, microbiology, synthetic organic chemistry and synthetic biology for the development of a versatile and tunable platform for the sustainable production of industrially relevant small molecules, with significant environmental and economic impact and provide vital proof-of-concept for further development of processes using plastic waste as a feedstock for microbial cell factories.

Planned Impact

Environmental and Public Impact:
This project will address an urgent unmet need for new technologies to breakdown and remove plastics from the environment and responds to public calls for reduction of plastic waste. These recalcitrant polymeric materials are pervasive throughout marine and soil ecosystems and have even recently been detected in drinking water, raising serious concerns about potential risks to human health and that of marine organisms. Consequently, there is mounting pressure on local authorities, governments and retail industries to reduce the amount plastic waste released into the environment, with new regulations such as the banning of plastics straws being proposed. However, these measures do not address the millions of tonnes of plastic waste that has already bioaccumulated, which is the focus of the proposed research. Crucially, this research will break the cycle of relatively high-value virgin plastics, which are made from small molecules from petrochemical origin, being made into disposable items, recycled and transformed into low-value second generation products or ending up in landfill, rivers and oceans.

Academic Impact:
This research will provide vital proof-of-concept for the molecular up-cycling of plastic waste, prompting further research in the area, thereby contributing to a toolbox of technologies for the transformation of plastic - an environmental pollutant - into industrially relevant, value-added products. Importantly, the unique merging of synthetic organic chemistry and synthetic biology for the valorisation of plastic waste will also go some way to address the prevailing disciplinary gap between these two fields.

Industrial and Economic Impact:
Production of commercially valuable bulk chemicals such as vanillin, benzyaldehyde and benzyl alcohol from a waste product will drastically reduce process costs and environmental footprint for the production of these chemicals. There is also the potential for a start-up or spin out company from this project, focusing on the production of bulk chemicals from plastic waste. This would generate jobs and revenue, boost the local economy and have a positive social impact.

Publications

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Dennis JA (2022) Tyramine Derivatives Catalyze the Aldol Dimerization of Butyraldehyde in the Presence of Escherichia coli. in Chembiochem : a European journal of chemical biology

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Sadler JC (2021) Microbial synthesis of vanillin from waste poly(ethylene terephthalate). in Green chemistry : an international journal and green chemistry resource : GC

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Sadler JC (2020) The Bipartisan Future of Synthetic Chemistry and Synthetic Biology. in Chembiochem : a European journal of chemical biology

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Sadler JC (2021) Interfacing non-enzymatic catalysis with living microorganisms. in RSC chemical biology

 
Title Different Days anthology 
Description PET to vanillin upcycling work inspired a student to write a poem, which has been published in the anthology 'Different Days' from Grey Hen Press, with proceeds supporting UK Youth Climate Coalition. 
Type Of Art Creative Writing 
Year Produced 2022 
Impact Impacts unknown at this time. 
URL https://www.greyhenpress.com/books/
 
Description A new method to convert waste plastic into the high value compound vanillin (found in flavourings, fragrances, pharmaceuticals etc etc) has been developed. This method uses engineered microorganisms and operates under extremely mild conditions (aqueous system, room temperature, no expensive reagents).
This resulted in a high impact publication which was widely reported in the public media (e.g. Guardian, BBC, Washington post and numerous podcasts and interviews).

I have also developed a method of growing engineered biofilms on plastic surfaces. We are now determining the usefulness of these biofilms in degrading plastic materials.
Exploitation Route This result will form the basis of a further grant application to develop this technology into a commercially viable and scalable processes to realise industrial up-cycling of plastic waste.
Sectors Chemicals,Environment,Manufacturing, including Industrial Biotechology

 
Description Engineering Escherichia coli for plastic upcycling (Research Grants 2021 Round 2)
Amount £20,000 (GBP)
Funding ID RGS\R2\212067 
Organisation The Royal Society 
Sector Charity/Non Profit
Country United Kingdom
Start  
End 04/2023
 
Description IBioIC Feasibility Funding: Microbial production of hydroquinone from waste
Amount £42,000 (GBP)
Organisation IBioIC 
Sector Academic/University
Country United Kingdom
Start 08/2021 
End 11/2021
 
Description IBioIC-Industry PhD Project: Microbial production of hydroquinone from waste feedstocks
Amount £121,000 (GBP)
Organisation IBioIC 
Sector Academic/University
Country United Kingdom
Start 10/2022 
End 09/2026
 
Description SULSA Early Career Researcher Award in Technology and Analysis
Amount £3,000 (GBP)
Organisation Scottish Universities Life Sciences Alliance 
Sector Academic/University
Country United Kingdom
Start 09/2019 
End 09/2020
 
Description Sustainable Microbial Manufacture of Adipic Acid from Industrial and Post-Consumer Waste
Amount £1,348,312 (GBP)
Funding ID EP/W019000/1 
Organisation Engineering and Physical Sciences Research Council (EPSRC) 
Sector Public
Country United Kingdom
Start 10/2022 
End 09/2025
 
Title Conversion of post-consumer PET to vanillin 
Description An engineered strain of E. coli capable of converting PET derived monomer terephthalate to the value added compound vanillin at room temperature under very mild conditions. We have also demonstrated coupling this to enzyme catalysed PET depolymerisation to show conversion of post-consumer plastic waste to vanillin. Manuscript submitted January 2021, awaiting outcome at time of writing. 
Type Of Material Technology assay or reagent 
Year Produced 2020 
Provided To Others? No  
Impact Proof of concept for molecular up-cycling of plastic waste. This will form the foundation of subsequent research programmes based on valorising waste plastic. 
 
Title E. coli strain for conversion of terephthalic acid to 3, 4-dihydroxybenzoic acid 
Description Strain of E. coli for use as a whole cell biocatalyst for the conversion of terephthalic acid to 3, 4-dihydroxybenzoic acid. 
Type Of Material Biological samples 
Year Produced 2020 
Provided To Others? No  
Impact Enables a key step in the development of novel up-cycling pathways for plastic waste. 
 
Description Central Saint Martins, UAL collaboration 
Organisation University of the Arts London
Country United Kingdom 
Sector Academic/University 
PI Contribution Provision of vanillin producing strain and scientific advisory role
Collaborator Contribution Artistic interpretation of UKRI-funded work to be presented at high-profile national and international art exhibitions.
Impact No outcomes yet - project is in early stage.
Start Year 2023
 
Description Collaboration with the University of Strathclyde - use of mesolens to analyse microbial biofilms 
Organisation University of Strathclyde
Country United Kingdom 
Sector Academic/University 
PI Contribution Growth of E. coli biofilms on plastic films, sample preparation, intellectual input (original idea)
Collaborator Contribution Owners of mesolens instrumentation, technical expertise and time spent analysing samples
Impact Collaboration still active and have obtained preliminary data only.
Start Year 2019
 
Description Directed Evolution platform at Edinburgh Genome Foundry 
Organisation University of Edinburgh
Country United Kingdom 
Sector Academic/University 
PI Contribution Conception of idea to establish a directed evolution platform at Edinburgh Genome Foundry based on previous research; experimental design; project coordination
Collaborator Contribution Bioinformatics expertise, generation of worklists for automation, help with experimental design
Impact Project in infancy - no outcomes yet.
Start Year 2022
 
Description Internal Collaboration on development of cold-active PETases 
Organisation University of Edinburgh
Country United Kingdom 
Sector Academic/University 
PI Contribution Collaborator on project to develop cold-active enzymes for plastic degradation. Provided letter of support and input into project proposal, which went on to be funded. This project will likely provide POC for a larger grant proposal in the future.
Collaborator Contribution Partners wrote the bulk of the proposal and will carry out the majority of wet-lab experimental work.
Impact Project ongoing. Multi-disciplinary: bioinformatics, analytical chemistry, synthetic biology and biochemistry.
Start Year 2020
 
Description Microbial synthesis of vanillin from PET 
Organisation SOLVAY SA (Commercial Partner)
Country Belgium 
Sector Private 
PI Contribution We are working with Solvay to further develop the vanillin-from-terephthalate pathway towards being an industrially useful platform for sustainable synthesis. Our contribution is all experimental work, data analysis and experimental design.
Collaborator Contribution Solvay are contributing project input, management and financial support.
Impact A three-fold improvement in vanillin titres has been achieved after 9 months working on the project. This is the basis for further engineering of this pathway and will likely lead to filing of a patent.
Start Year 2021
 
Description Non-Random AHRC research project 
Organisation Edinburgh College of Art (ECA)
Country United Kingdom 
Sector Academic/University 
PI Contribution Advisor to research project looking to develop a series of creative processes/methodologies that will engage both general and specific publics in the conversation around these technologies and the ethical implications and long term impact of their use, a 'future visioning'. My contribution will be design and delivery of a workshop for the public at the ASCUS art and science laboratory at Summerhall in year 1 and/or year 2; and 2 meetings a year with feedback and engagement on the art works/prototypes.
Collaborator Contribution Partners are leading the project and developing the new methodologies for engaging the public with current scientific research.
Impact No outputs yet; project still in infancy.
Start Year 2022
 
Description Victrex partnership 
Organisation Victrex
Country United Kingdom 
Sector Private 
PI Contribution Biotechnology and strain engineering expertise; performing wet-lab experiments to drive forwards project
Collaborator Contribution Strategic direction of the project; provision of PEEK materials to UoE lab for testing
Impact Joint Victrex-IBioIC funded PhD studentship converting industrial waste streams into hydroquinone. Project is in its first 6 months, but proof of concept data already generated.
Start Year 2022
 
Description British Science Festival Award Lecture (Environmental Sciences) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Public lecture as part of the 2022 British Science Festival. Attended by >100 members of the public, including school students. Sparked general discussion on the use of microbes to tackle the plastic waste crisis and to make everyday chemicals such as vanillin.
Year(s) Of Engagement Activity 2022
URL https://britishsciencefestival.org/award-lecture-winners-at-british-science-festival-2022/#:~:text=J...
 
Description EUSci Podcast 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Undergraduate students
Results and Impact Podcast interview discussing use of engineered microbes for plastic valorisation.
Year(s) Of Engagement Activity 2021
URL https://podcasts.apple.com/it/podcast/plastic-is-the-new-vanilla/id1521154097?i=1000543611418
 
Description Fun Kids Science Weekly Podcast 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Schools
Results and Impact Podcast for children talking about turning plastic into useful chemicals using microbies.
Year(s) Of Engagement Activity 2021
URL https://podcasts.apple.com/us/podcast/the-plastics-challenge/id1565632801
 
Description Further roll out of Leaders in Science outreach programme in collaboration with IBioIC 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact Leaders in Science (www.leadersinscience.co.uk) is a long term outreach schemes that I started during my PhD. I am now programme Director and collaborate with IBioIC to deliver the programme in Scotland. We recruit programme mentors (typically PhD students and PostDocs) to work regularly with secondary school pupils, first delivering off-curriculum workshops (eg on food security, vaccines, industrial biotechnology), then the mentors help the students develop workshops to take into local primary schools. The cascade learning structure enables development of commination skills, technical knowledge and teamwork skills of both mentors and pupils.
Year(s) Of Engagement Activity 2019,2020,2021
URL http://leadersinscience.co.uk/
 
Description Interview for Galileo German TV programme 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Featured on a German science channel video discussing process of converting PET into vanillin. Video viewed 48K times.
Year(s) Of Engagement Activity 2021
URL https://www.youtube.com/watch?v=Shd3wGBiirQ
 
Description Plastics Challenge Podcast 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Podcast interview on bio-based PET to vanillin upcycling work
Year(s) Of Engagement Activity 2021
URL https://podcasts.apple.com/us/podcast/the-plastics-challenge/id1565632801
 
Description Press release 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact University of Edinburgh press release regarding use of engineered microbes to convert waste plastic into vanillin.
Triggered substantial media interest and resulted in articles and interviews in several mainstream news outlets, including:
BBC World Service (https://www.bbc.co.uk/programmes/p09lslmg)
The Guardian
The Washington Post
The Daily Mail
Year(s) Of Engagement Activity 2021
URL https://www.ed.ac.uk/news/2021/bacteria-serves-tasty-solution-to-plastic-crisis
 
Description RSC Podcast: A sustainable future for plastics 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Part of Royal Society of Chemistry podcast series.
Year(s) Of Engagement Activity 2021
URL https://www.rsc.org/new-perspectives/brought-to-you-by-chemistry-podcast/#undefined
 
Description RecycleSmart Get Better at Garbage Podcast 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact Podcast interview on vanillin from PET work using engineered microbes
Year(s) Of Engagement Activity 2021
URL https://d.facebook.com/RecycleSmartSolutions/videos/did-you-know-that-most-of-the-vanilla-flavouring...
 
Description Talking Biotech Podcast (most listened to episode of 2021) 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Podcast series designed to make biotechnology accessible to non-expert audiences. Most listened to episode of 2021, and as of October 2021 had been downloaded 7548 times.
Year(s) Of Engagement Activity 2021
URL https://www.colabra.app/podcasts/talking-biotech/296-turning-plastic-waste-into-vanilla/
 
Description Talking Science Lecture (STFC Rutherford Appleton Laboratory) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Public lecture on the use of microbes to upcycle plastic waste into high value chemicals, using our work on vanillin production from PET as an example. Sparked a lot of interesting discussion on the use of microbes to tackle environmental and sustainability challenges and changed perceptions and understanding of where everyday chemicals come from.
Year(s) Of Engagement Activity 2021
URL https://m.facebook.com/ScienceAndTechnologyFacilitiesCouncil/videos/talking-science/284165310382385/