Endocrine scaffolds and peptide networks: How is the molt cycle and ecdysis programme controlled in crustaceans?

Lead Research Organisation: Aberystwyth University
Department Name: IBERS

Abstract

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Technical Summary

In contrast to insects, our understanding of the neuropeptide networks involved in crustacean ecdysis is rudimentary. However, our recent research has identified novel potential control mechanisms that promise to revolutionise our understanding of crustacean molt control. The overarching objective of this work is to develop a much more detailed model of the neuroendocrine control of crustacean molting, by functional analysis of neuroendocrine scaffolds and networks, comparing with insects. Three interrelated themes will be investigated: 1) The control of ecdysteroid synthesis, and entry into premolt, 2) The initiation of the "ecdysis cassette" via a proposed ecdysis-triggering hormone/eclosion hormone (ETH/EH) signalling network. 3) The interaction of these peptides in regulating sequential release of the hormones critical in integrating successful ecdysis in or crab model, Carcinus maenas.
PacBio Iso-Seq transcriptomes will be produced (specific-YO and epidermis and whole crab), and analysed to identify full-length transcripts for receptors (MIH, CHH, ETH and EH) and peptides (ETH, EH). The receptors will be functionally deorphaned by transient expression in cell-based assays (GPCRs- aequorin Ca2+ reporting, mGCs, cGMP measurement). The cells (neurones and peripheral non-neuronal ETH producing cells) expressing the receptor and peptide transcripts will be identified using RNAScope, quantitative PCR (dd-PCR) and IHC by developing antisera for ETH and EH. Functional analysis of neuropeptide networks with be done by using RNAi, peptide injections and measurement of perturbations of neuropeptide cascades in the ecdysis cassette and ultrasensitive TR-FIA for ETH, EH and CRZ. CRZ abrogation of MIH and CHH signalling in the YO will be investigated using ecdysteroid and cGMP RIA. By using these multifaceted approaches, we aim to answer a big question in arthropod endocrinology-How does neuropeptide signalling integrate molting processes in crustaceans?

Planned Impact

The research questions posed in this proposal are firstly of interest to academic groupings, in Biological Sciences and particularly to invertebrate endocrinologists and neuroscientists. We are attempting to answer outstanding, fundamental questions in arthropod neuroendocrinology and physiology, by taking a comparative approach; the work is unifying, in that we are using the considerable body of knowledge that is available for insect model systems, to investigate these in a well-established crustacean non-model. It is now becoming clear that arthropods possess a common "toolbox" of neuropeptides and receptors, as befits their shared ancestry. Intuitively, for the most pervading phenomena in the life history of arthropods- growth and ecdysis, we should expect that common neuroendocrine control mechanisms are ubiquitous. Counterintuitively, some are very different (for example in the control of molting hormone synthesis in the two subphyla), yet others are instantly recognisable (the hormonal control of exuviation- the "ecdysis cassette"). By identifying core neuropeptide signalling pathways involved in crustacean ecdysis, we are trying to answer a big question that impacts upon every aspect of arthropod physiology and development. Thus, we have every confidence that the results from our studies will, in the near future, appear in biology textbooks. Publishing primary papers and reviews in high impact journals, presenting our work at national and international meetings, will disseminate our findings. We anticipate that the proposed work will lead to up to eight high quality, primary research papers. Crustaceans and insects are immensely charismatic animals. Crustacean ecdysis and insect metamorphosis and eclosion are fascinating behaviours that capture interest, as evidenced by our BBC coverage of crab ecdysis, (The One Show). Thus, we plan to maximise public exposure to our research (see Pathways to Impact statement). Both DCW and SGW are passionate about public engagement and have had extensive media coverage. To summarise; we will engage public interest by taking advantage of, and creating available opportunities. Relevance and impact to industry. The proposed work has a direct impact on crustacean aquaculture. Firstly, the current shrimp (penaeid) industry, presently worth 39 billion USD pa, is being transformed by development of environmentally sustainable indoor recirculating aquaculture systems (RAS) as opposed to extensive culture, which has many negative environmental and disease issues. Furthermore, the by-product of molting- the old exuviae are used to extract chitosan for pharmaceutical processes- a market worth 1.5 billion USD, which is set to grow to over 17 billion USD in the next 5 years. At the moment, we know very little regarding the hormonal control of molting in penaeid shrimp, yet we have a huge body of research in crabs, which is translational and can be directly applied to shrimp aquaculture, and quite fundamental issues which dramatically decrease productivity, such as molt-related mortality. Further potential impacts relate firstly to animal welfare issues, particularly during transportation of live crustaceans, the responses due to stress, indicated by our research implicates a common set of neuropeptides that are involved in the control of molting, and the stress response, and are probably involved in the considerable mortality of crustaceans during transport to market. Finally, a future, but possibly critical impact relates to issues involving the use of stable pseudopeptide mimetics in insect pest control. There is a renewed interest in developing these to target groups or single species of insects, and those associated with disruption of growth and ecdysis are ones that are currently demanding attention. Thus, knowledge of possible off target effects on crustaceans, with regard to disruption of molting will be vital in assessing the potential impact of these on non-target organisms.

Publications

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Description Although the project has been active since 2020, it was significantly impacted by the covid crisis due to restricted laboratory access and field work in that time. We are grateful that BBSRC have provided a no-cost extension to complete the delivery on our original objectives by Sept 2024. Much of the Aberystwyth contribution was to develop reagents and strategies to disrupt mRNA transcription and translation through RNA interference. We have developed double stranded RNAs to key targets including corazonin to investigate signaling to the so-called Y-organs (YOs) of the crab which produce moulting hormone, or ecdysone. The consensus view on moult control in crabs is that YOs are negatively regulated by a neuropeptide hormone called moult-inhibiting hormone (MIH) which is synthesised and released from the optic ganglia of the crab nervous system. We have recently challenged this view by proposing that corazonin may play a stimulatory function. Our working hypothesis is that corazonin may abrogate the effects of MIH on ecdysone production at the YOs because we discovered that the receptor for corazonin is dramatically upregulated in the YOs just before moulting occurs. We have developed highly selective and sensitive assays to measure the absolute levels of corazonin receptor mRNA in the YOs using digital droplet PCR (ddPCR) and we are using RNAi to explore the effects of corazonin signal perturbation on moult regulation. Whilst we develop these, we have shown that removing MIH signaling by eyestalk ablation in the crab Carcinus results in elevated corazonin receptor at the YOs, hinting at the interplay between the MIH and corazonin signaling pathways. This work is novel and still requires some finishing for publication. Work in our partnering group at Bangor University is monitoring the effects of corazonin application to in vitro YO preparations on ecdysone synthesis. In due course we will combine our data to elucidate the mechanisms of corazonin and MIH control of moulting.
At Aberystwyth we have been applying the highly sensitive and specific 'digital PCR' assay for measuring 'carcikinin' (we have no identified that carcikinin is in fact eclosion triggering hormone, or ETH) gene expression analysis across the crab moulting cycle. Our collaborators in Bangor (Webster) have mapped the nerve cells that synthesise the ETH peptide. Therefore, we now have stronger evidence that ETH likely plays a key role in the moulting process because levels of gene activity increase at critical times in the moult process. We also know from this meticulous genetic and cellular work that ETH is found primarily in the central nervous system (ventral nerve ganglia) and in the eyes and brain (to a lesser extent). These pieces of evidence are now enabling us to define the function of this molecule that could have important implications for understanding the moult process. For example, our Bangor partners have used their luminescent cell reporter assays to determine that ETH binds a GPCR (the ETHR) to activate cellular signaling. Using this new information at Aberystwyth we have developed Hybridization Chain Reaction In Situ Hybridization (HCR-ISH) to examine ETHR expression in the nervous system. Using multiplexed NCR-ISH assays for ETHR and other components of the ecdysis cascades modelled on the insect system, we have demonstrated that ETHR is not localised to eclosion hormone cells (that we define the cDNA sequence for and designed HCR probes to) as would be expected from insect models. Thus, there is a disconnect between ETH and EH systems, a situation clearly different from insects. We are therefore revealing the evolution of quite distinct ecdysis control mechanisms here, which although, in terms of the peptides and receptors, reflect common ancestry, there is now considerable divergence between these two arthropods groups. These differences were further illuminated when we measured the release of ETH into the blood (evidence that it is a circulating hormone). The peak titers for ETH appear somewhat later in the moult cycle than would be expected it ETH as initiating the ecdysial endocrine cascades as for insects. This intriguing story on crustacean ETH/ETHR and EH story is nearing completion for publication within the granting period.
We have also shown that our model species, Carcinus, expresses multiple allatostatin forms. These pleiotropic neuropeptide hormones have been shown to have widely diverse functions but have been implicated in ecdysis as well as myoinhibitory/tropic functions in insects. For the first tie we have deorphaned a GPCR receptor for each of three allatostatins in crabs, AST-C, AST-CC and AST-CCC (Bangor). At Aberystwyth we have used HCR-Ish to simultaneously map the mRNA transcripts for these allatostatins throughout the nervous system of Carcinus. These efforts show that cells in the abdominal ganglion AST C and CC which are probably neuroendocrine, whereas the cells in the brain produce AST-C and -CCC (although with almost no co-localisation). So the allatostatin peptides that are co-released at ecdysis (Bangor) are somewhat unusual, and point to ecdysis related functions of AST-C/CC, which in the context of expression of the receptor in hemocytes (determined with end-point PCR), might suggest a role in immunity, resonating with the function of AST-C in flies, where it modulates immunity to ensure that the immune system doesn't over respond when faced by a barrage of potential pathogens at the vulnerable stage of ecdysis. This finding may have future relevance to aquaculture and crustacean health.
We have been using the refined HCR-Ish at Aberystwyth to explore another key neuropeptide in ecdysis, that is CCAP crustacean cardioactive peptide (CCAP) and CCAP receptor (CCAPR) which we have de-orphanised (Bangor). CCAP is required by crabs for stereotyped ecdysis behaviors and is co-released with the cuticle hardening hormone, Bursicon. We are nearing completion of the CCAP manuscript but have been waiting on data from PacBio long-read sequencing to confirm some unusual C-terminal ambiguities in our RNaseq-derived CCAPR sequences and that appear to be genuine based on wet-lab sequencing efforts. The PacBio long-read sequencing has been done and awaiting my analysis to reveal splice forms or whether these differences are from indels in the CCAPR sequences. These data will inform our functional interpretation of receptor assays (done using both C-terminal modification) and bioassays and provide insight to the original of the isoforms.
Manuscripts for our Allatostatin, ETH and EH and CCAP/R works are all in mature stages of development and will be submitted in 2024.
Exploitation Route It is still too early on in our endeavours to unlock the full regulatory programme of moulting but we anticipate that our work will, in the medium to longer-term inform strategies for managing moulting control in crustaceans and may have relevance t crustacean health and aquaculture (e.g. allatostatin work detailed above).
Sectors Agriculture

Food and Drink

Other

 
Title Digital droplet PCR assays 
Description I have developed digital droplet PCR assays on the BioRad QX200 platform for the measurement of gene expression of corazonin receptor, carcikinin and refrence genes ELF1a and uniquitin E3 ligase. More recently (2021/22) I have added a suite a circadian clock genes to this assay inventory inclusing Period, timeless, clock, bmal and cryptochrome2. More gene targets are in progress. These will facilitate high senstivity and high resolution gene absolute gene expression quantification and link rhythmic biology to the ecdysis programme- there is evidence that corazonin, which we believe plays a pivotal role in ecdysis, colocalises with clock transcripts indicating a link between the chronobiology and moult regulation (these animals molt periodixally and in phase with tides, daily and lunar events). 
Type Of Material Technology assay or reagent 
Year Produced 2021 
Provided To Others? No  
Impact None yet, the research questions for which these assays have been developed are ongoing but, slowed by restricted access to the laboratory (covid) 
 
Title Hybridization chain reaction reagents 
Description We have developed a suite of hybridization chain reaction (HCR) in situ hybridization probes and reagents for localising neurohormone and receptor mRNA expression in tissues of the target species, Carcinus maenas. These reagents allow multi-channel fluorescent localization for simultaneous labelling of multiple target transcripts in wholemount crab samples. Assays include allatostatin-C/CC and CCC, Crustacean cardioactive peptide (CCAP) and CCAP receptor, Eclosion hormone, ecdysis triggering hormone receptor. 
Type Of Material Technology assay or reagent 
Year Produced 2022 
Provided To Others? No  
Impact As detailed in the original proposal, we will utilise these reagents to obtain high resolution spatial expression patterns on neuropeptide hormones and their cognate receptors in our model species. This will contribute significantly to our understanding of the inter-endocrine pathways in crustacean moulting. The sensitivity and specificity of the probes enable us to visualise mRNAs expressed at low levels. 
 
Title PacBio long-read transcriptomes 
Description Carcinus maenas Y-organ and nervous systems transcriptomes 
Type Of Material Database/Collection of data 
Year Produced 2023 
Provided To Others? No  
Impact Still under analysis 
 
Description Exeter University 
Organisation University of Exeter
Country United Kingdom 
Sector Academic/University 
PI Contribution We are providing the resources and materials to conduct PacBio sequencing of the mRNA transcripit from a variety of tissues that will be aligned to the draft Carcinus maenas genome to identify GPCR splice variants. The PacBio reads will also be used to confirm and gap-fill genomic sequences in the draft genome.
Collaborator Contribution Eduarda M Santos is collaborating with us on the crab Carcinus maenas PacBio sequencing to elucidate GPCR splice variants. The Exeter group, together with CEFAS (Dr Van Aerle) have sequenced the genome (unpublished) of this species that they will provide access to and support in assembling our PacBio reads to the genome.
Impact None as yet- due to the covid pandemic we are still waiting to begin the PacBio sequencing on this project.
Start Year 2020