Understanding Ice Formation in Plants: Finding new Routes to Freezing Tolerance
Lead Research Organisation:
University of Warwick
Department Name: Chemistry
Abstract
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Technical Summary
The aim of this proposal is to understand the role of plant cell wall constituents, particularly pectins, in mediating and/or preventing extracellular ice formation, which plays a key role in determining the freezing tolerance of plants.
The two main objectives of this project are: (1) to discover the impact of cell wall pectin cross-linking on ice nucleation and growth in plant tissues (WP1) and (2) to reveal the mechanism whereby pectin cross-linking influences plant freezing tolerance (WP2).
To this end, we will use molecular dynamics simulations to investigate the atomistic details of how modified and cross-linked pectins affect ice nucleation and growth and high-speed cryo microscopy to visualise how ice forms and spreads between particular cell types and under different conditions. Then, we will use cryo microscopy and infra-red thermal imaging of Arabidopsis genetic mutants to reveal how specific changes to the cell wall mediated by single genes influence ice growth within and between tissues. The structural properties of cell walls in the mutants examined will be characterised with respect to their mechanical strength and porosity, via a confocal micro-extensometer as well as by a fluorescence quenching method relying on the ability of less porous cell walls to exclude large molecules. Under all conditions, the sensitivity of wild type and mutant plant tissues to freezing and thawing will be assessed by measuring ion conductivity in electrolyte leakage assays. The ability of plants to survive freezing events will be monitored through visual assessment of re-growth after the freezing event and subsequent return to normal temperatures.
As a whole, this ambitious programme of work will enable the rational design of genetic modifications specifically tailored to enhance freezing tolerance in plants, building on the novel microscopic insight that we will deliver by our complementary methodologies, bringing together experiments and simulations.
The two main objectives of this project are: (1) to discover the impact of cell wall pectin cross-linking on ice nucleation and growth in plant tissues (WP1) and (2) to reveal the mechanism whereby pectin cross-linking influences plant freezing tolerance (WP2).
To this end, we will use molecular dynamics simulations to investigate the atomistic details of how modified and cross-linked pectins affect ice nucleation and growth and high-speed cryo microscopy to visualise how ice forms and spreads between particular cell types and under different conditions. Then, we will use cryo microscopy and infra-red thermal imaging of Arabidopsis genetic mutants to reveal how specific changes to the cell wall mediated by single genes influence ice growth within and between tissues. The structural properties of cell walls in the mutants examined will be characterised with respect to their mechanical strength and porosity, via a confocal micro-extensometer as well as by a fluorescence quenching method relying on the ability of less porous cell walls to exclude large molecules. Under all conditions, the sensitivity of wild type and mutant plant tissues to freezing and thawing will be assessed by measuring ion conductivity in electrolyte leakage assays. The ability of plants to survive freezing events will be monitored through visual assessment of re-growth after the freezing event and subsequent return to normal temperatures.
As a whole, this ambitious programme of work will enable the rational design of genetic modifications specifically tailored to enhance freezing tolerance in plants, building on the novel microscopic insight that we will deliver by our complementary methodologies, bringing together experiments and simulations.
Description | Fluid dynamics through the cell wall |
Organisation | University of Warwick |
Department | Warwick Mathematics Institute |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | We have expanded the scope of the computational aspect of the project by involving (free of cost) a team of experts in fluid dynamics, with the purposes of tackling the problem if the percolation of molecules and ice through the cell wall. |
Collaborator Contribution | The team has brought invaluable expertise and skills into the project. Specifically, they have provided a continuum perspective that has hugely help us in making progress across multiple length scales |
Impact | This partnership led to a PhD position, supported by the HetSyS CDT at the University of Warwick, which we hope to fill in the near future. |
Start Year | 2022 |
Description | (multiple) School Visit |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Schools |
Results and Impact | I have run multiple sessions of an Outreach/WideningParticipation activity which I have titled "Ice, Ice Baby". The activity involves a discussion about water and ice, as well as building 3D models of ice crystals (using the molymod kits). |
Year(s) Of Engagement Activity | 2022,2023 |
URL | https://sossogroup.uk/outreach/ |