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Investigating the role of the Sln1 turgor sensor kinase in the rice blast fungus Magnaporthe oryzae

Lead Research Organisation: University of East Anglia
Department Name: Sainsbury Laboratory

Abstract

Rice blast is a devastating disease which affects rice cultivation all over the world. Blast is caused by a fungus called Magnaporthe oryzae and this project aims to investigate mechanisms required by the fungus to infect rice plants. The rice blast fungus produces a specialised infection structure called an appressorium, which is a dome-shaped cell that can generate enormous pressure of up to 8MPa (or 40 times the pressure of a car tyre). This pressure is applied as physical force at the leaf surface to puncture the plant cuticle. This remarkable infection process enables the fungus to cause disease.

We aim to investigate how the enormous pressure generated inside the appressorium is translated into physical force at the base of the infection cell. We have identified a sensor protein called Sln1, which is necessary for the infection cell to regulate turgor pressure. Without this protein, the appressorium continues to expand under pressure, but cannot generate physical force and break its way into a rice leaf.

In this project we will investigate how Sln1 functions in the rice blast fungus. We will investigate how Sln1 is activated during appressorium development. We will identify proteins that physically interact with Sln1 and may therefore contribute to its function, and we will study the proteins that are likely to be activated, or repressed in function by the activity of Sln1.

In this way, we aim to define the turgor-sensing network that is regulated by Sln1 and understand how the appressorium functions. This research may lead to the development of new and novel disease control strategies that are focused on preventing fungal pathogens, like the blast fungus, from being able to gain entry to plant tissue.

Technical Summary

The project will investigate the mechanism of appressorium-mediated plant infection by the causal agent of rice blast, the filamentous fungus Magnaporthe oryzae. Appressoria of the rice blast fungus generate enormous turgor which is applied at the rice leaf surface as physical force to breach the rice leaf cuticle and gain entry to plant tissue.

The project aims to determine how a pressure-dependent sensor kinase called Sln1 is able to control the generation of turgor in the appressorium, in order to re-establish polarised growth. Sln1 is a histidine-aspartate kinase and the temporal dynamics of Sln1 phosphorylation will be determined during appressorium development along with its putative transfer and response regulator proteins, Ypd1 and Ssk1. To identify Sln1 protein-protein interactions, proximity-dependent biotinylation coupled to mass spectrometry will be used and interacting partners functional analysed by targeted gene replacement.

Sln1-dependent changes in protein phosphorylation will then be analysed during appressorium development, using an optogenetic approach to generate a conditional Sln1 mutant that can be light-inactivated, so that rapid changes in Sln1-dependent phosphorylation can be determined to order the sensing pathway. Initial data-dependent acquisition of phospho-peptide enriched samples will be used to build a spectral library of phospho-peptides, which will enable us to quantify phosphorylation events by Parallel Reaction Monitoring. This information will be used to define the Sln1 turgor-sensing pathway and individual components then functionally characterised and studied using live cell imaging of appressorium turgor generation.

When considered together, the objectives of this research project will provide new insight into the biology of plant infection by one of the most important crop diseases in the world today. This information will be used to inform new disease control strategies that are urgently required.

Publications

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Ryder LS (2022) The appressorium at a glance. in Journal of cell science

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Tang B (2023) Rgs1 is a regulator of effector gene expression during plant infection by the rice blast fungus Magnaporthe oryzae. in Proceedings of the National Academy of Sciences of the United States of America

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Zdrzalek R (2024) Bioengineering a plant NLR immune receptor with a robust binding interface toward a conserved fungal pathogen effector. in Proceedings of the National Academy of Sciences of the United States of America

 
Description We have discovered how pressure in a fungal cell is monitored during plant infection. If we can learn to control this process it will allow the development of new disease control strategies.
We have developed a new method for measuring membrane tension during appressorium development of the blast fungus. This allows turgor to be quantified in a visual microscopy-based method. this has been published and is now being applied to investigate specific mutants in the Sln1 turgor-sensing complex.
We have identified a set of Sln1 interactors and are functionally characterising them.
We have developed Cryo-Electron tomography methods to structurally characterise the Sln1 complex.
Exploitation Route New disease control strategies could be developed.
Sectors Agriculture

Food and Drink

 
Description The project is still ongoing but has led to discussions on the use of turgor-sensing in appressoria as a disease control strategy. These discussions are with a major agrigultural biotechnology company. In addition, the project has led to a collaboration with the Gregor Mendel Institute in Vienna on cryo-electron tomogoraphy to visualise the turgor-sensing apparatus in living appressoria.
First Year Of Impact 2023
Sector Agriculture, Food and Drink
Impact Types Economic

 
Title Magnagenes Version 1.0 
Description We report the compilation of MagnaGenes , a database which summarises all the available studies reporting phenotypic data about gene function in the blast fungus Magnaporthe oryzae. MagnaGenes includes information for 1637 genes and allows them to be sorted by putative function. For example, those with a particular role, such as 'conidiation' can be defined and grouped together. Magnagenes also contains clickable hyperlinks to the associated primary literature and to gene information held in the Ensembl and Uniprot databases. Magnagenes highlights some of the strengths and weaknesses in the Magnaporthe research community's effort to understand the genetic basis of the ability of M. oryzae to cause blast disease. It can serve as a guide to the understudied aspects of the blast fungus biology. We provide Magnagenes to the community as part of the OpenRiceBlast and Open WheatBlast initiatives. We aim to release regular updates to Magnagenes and welcome additions or corrections from the blast research community to expand the database. 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact Magnagenes has prov en an invaluable tool in all gene functional studies and for defining differences between rice blast and wheat blast. 
URL https://zenodo.org/record/4647766#.Yi7BXhDMI6E
 
Description Guest lecture at the IISPMI Seminar Series, Chinese Academy of Agricultural Sciences in Beijing, China 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Policymakers/politicians
Results and Impact Talk entitled: "Investigating the biology of invasive growth by the rice blast fungus Magnaporthe oryzae"
Year(s) Of Engagement Activity 2023
 
Description Guest lecture at the Wellcome Centre for Cell Biology, The Univeristy of Edinburgh 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Postgraduate students
Results and Impact talk entitled: Investigating the Cell Biology of Rice Infection by the Blast Fungus Magnaporthe oryzae
Year(s) Of Engagement Activity 2023
 
Description Invited Speaker at the 52nd SBBq Annual Meeting in São Paulo, Brazil 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Talk entitled: "Investigating the cell biology of plant infection by Magnaporthe oryzae, causal agent of Rice Blast and Wheat Brusone disease"
Year(s) Of Engagement Activity 2023
 
Description Invited speaker at Banbury Conference, Programmed Cell Death in Microorganisms, Cold Spring Harbor, NY, USA 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Talk entitled: Understanding programmed cell death during infection-related development by the rice blast fungus Magnaporthe oryzae
Year(s) Of Engagement Activity 2022
 
Description Invited speaker at Royal Microscopical Society Meeting at Jonh innes Centre, Norwich 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Delivered a talk entitled "Investigating the Cell Biology of Rice Infection by the Blast Fungus Magnaporthe oryzae"
Year(s) Of Engagement Activity 2023
 
Description Keynote lecture at the World Seed Industry safety Forum, Chengdu, China 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact Lecture entitled: Investigating the cell biology of invasive growth by the rice blast fungus Magnaporthe oryzae
Year(s) Of Engagement Activity 2022
 
Description invited speaker at the 12th International Congress of Plant Pathology (ICPP) in Lyon, France 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Talk title: Functional analysis of the mep effector gene repetoire of the blast fungus Magnaporthe oryzae
Year(s) Of Engagement Activity 2023
 
Description invited speaker at the Institute of Plant and Microbial Biology symposium, Academia Sinica, Taipei, Taiwan 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact talk title: Can a knowledge of septin-dependent plant infection by the blast fungus Magnaporthe oryzae be used for disease control?
Year(s) Of Engagement Activity 2023