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Understanding the role of lipid remodelling in the modulation of human brown adipogenesis using a stem cell-based system

Lead Research Organisation: University of Cambridge
Department Name: Institute of Metabolic Science

Abstract

Brown adipose tissue is an essential organ for regulating body temperature and energy dissipation. Its function has been well characterised in mice and has recently attracted enormous interest in humans, where it shows some unique molecular and functional differences not well characterised. Individuals with substantial amounts of brown fat have a lower risk of diabetes, lower triglyceride levels and a healthier fat distribution. Conversely, obese insulin-resistant diabetic patients have few amounts and less active brown fat.

Despite the potential relevance of brown adipose tissue to human health, the knowledge about human brown fat activation, development and maturation required for its exploitation is negligible.
Initial evidence has revealed the importance of a specific type of lipids in maintaining an undifferentiated state in stem cells and the contribution of particular lipid species to the differentiation of specialised cell types.
Obese patients exhibit altered lipid remodelling profiles in adipocytes, and we posit that these alterations may compromise successful brown adipose tissue maturation.

There are two main difficulties to studying brown fat biogenesis in humans:
a) insufficient knowledge about human-specific brown fat's molecular components and
b) limited access to human brown fat because it is scarce and typically anatomically interspersed within the normal white fat.

We have developed a unique protocol of brown fat adipocyte differentiation from human stem cells to overcome these two bottlenecks.

Stem cells solve the problem of scalability, providing enough human brown fat to investigate. Also, because the protocol we have developed evolves through every stage of development, this novel approach enables for the first time the success in our objective of elucidating the dynamic role of lipids in human brown adipocytes differentiation and activation and provides a unique toolset to optimise its development by targeting its lipid metabolism.

Technical Summary

Having active brown adipose tissue (BAT) correlates with a low risk of diabetes, lower blood pressure, lower triglyceridaemia and a healthier fat distribution. Thus, activating BAT is a promising and safe option to treat obesity and associated cardiometabolic comorbidities. However, several hurdles need to be overcome first: (1) the translational limitations of current knowledge of BAT physiology predominantly learned from mice and (2) inaccessibility to reliable human BAT for experiments given the limited amounts in obese and diabetic patients.
This project's big aim is to elucidate the unique role played by lipids in regulating BAT differentiation in humans. This innovative focus is enabled by the unique convergence of expertise in lipid metabolism and BAT stem cell differentiation and activity. We will define how lipid composition changes and specifically adapts throughout differentiation and how relevant this dynamic regulation is to promote the progression through the specific maturation stages. This information is critical to promoting BAT differentiation (and activation) and understanding how lipid composition alterations during obesity may prevent differentiation. Our data might reveal distinctive lipid signatures that are valid as a biomarker of the brown adipocyte's differentiation stage or thermogenic potential that is useful for precision medicine approaches to build thermogenic capacity.
We have developed a unique tool, a protocol to generate BAT from human stem cells that follows the physiological progression through every stage of development. We will use a multi-omics approach including proteomics, lipidomics and metabolomics at each stage of the differentiation coupled with selective perturbational analyses at crucial development stages to elucidate the dynamic role of lipid remodelling in BAT differentiation. The most promising targets for drug intervention will be further validated using human physiological data from a well-characterised cohort.

Publications

10 25 50
 
Description MRC MDU Programme Grant. "Adipose Tissue Dysfunction and Lipotoxicity: Uncoupling Obesity from associated metabolic comorbidities". 1/4/2024-30/3/2029 £2,500,000
Amount £2,500,000 (GBP)
Organisation University of Cambridge 
Sector Academic/University
Country United Kingdom
Start 04/2024 
End 04/2029
 
Description Project Grant
Amount £984,109 (GBP)
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 03/2023 
End 03/2027
 
Title Tissue culture with low volume to prevent hypoxia 
Description Validation of hypoxia as a key factor preventing optimal tissue culture cell functionality. Use of small amount of volume to improve output 
Type Of Material Technology assay or reagent 
Year Produced 2022 
Provided To Others? No  
Impact Improvement quality of tissue culture cellular output 
 
Description BAT analysis 
Organisation Centro de Investigacion Principe Felipe
Country Spain 
Sector Public 
PI Contribution Our group has developed the protocol fr human born fat development
Collaborator Contribution Prof. Kathryn Lilley (Univ of Cambridge): Collaboration and use of the Proteomics Centre facilities to perform LOPT proteomic analyses on differentiating stem cell-derived brown adipocytes at different stages. Prof. Julio Saez-Rodriguez (Univ of Heidelberg): Development and use of integration methods (mainly COSMOSR) for the combined analysis of omic data. Dr. Maria Chondronikola (UC Davis): Contribution to prioritisation/validation of targets using transcriptomic and clinical data from obese women exposed to cold. Dr Stefania Carobbio (CIPF) experiments with White and brown differentiation Dr Francesco Napolitano, KAUST, Saudi Arabia, bioinformatic analysis for repositioning. Dr Davide Chiarugi, Max Plnk. Bioinformatics
Impact This is a multidisciplinary collaboration combining cell biology and proteomics, bioinformatics
Start Year 2021
 
Description BAT analysis 
Organisation Heidelberg University
Country Germany 
Sector Academic/University 
PI Contribution Our group has developed the protocol fr human born fat development
Collaborator Contribution Prof. Kathryn Lilley (Univ of Cambridge): Collaboration and use of the Proteomics Centre facilities to perform LOPT proteomic analyses on differentiating stem cell-derived brown adipocytes at different stages. Prof. Julio Saez-Rodriguez (Univ of Heidelberg): Development and use of integration methods (mainly COSMOSR) for the combined analysis of omic data. Dr. Maria Chondronikola (UC Davis): Contribution to prioritisation/validation of targets using transcriptomic and clinical data from obese women exposed to cold. Dr Stefania Carobbio (CIPF) experiments with White and brown differentiation Dr Francesco Napolitano, KAUST, Saudi Arabia, bioinformatic analysis for repositioning. Dr Davide Chiarugi, Max Plnk. Bioinformatics
Impact This is a multidisciplinary collaboration combining cell biology and proteomics, bioinformatics
Start Year 2021
 
Description BAT analysis 
Organisation King Saud University
Country Saudi Arabia 
Sector Academic/University 
PI Contribution Our group has developed the protocol fr human born fat development
Collaborator Contribution Prof. Kathryn Lilley (Univ of Cambridge): Collaboration and use of the Proteomics Centre facilities to perform LOPT proteomic analyses on differentiating stem cell-derived brown adipocytes at different stages. Prof. Julio Saez-Rodriguez (Univ of Heidelberg): Development and use of integration methods (mainly COSMOSR) for the combined analysis of omic data. Dr. Maria Chondronikola (UC Davis): Contribution to prioritisation/validation of targets using transcriptomic and clinical data from obese women exposed to cold. Dr Stefania Carobbio (CIPF) experiments with White and brown differentiation Dr Francesco Napolitano, KAUST, Saudi Arabia, bioinformatic analysis for repositioning. Dr Davide Chiarugi, Max Plnk. Bioinformatics
Impact This is a multidisciplinary collaboration combining cell biology and proteomics, bioinformatics
Start Year 2021
 
Description BAT analysis 
Organisation Max Planck Society
Department Max Planck Society Leipzig
Country Germany 
Sector Academic/University 
PI Contribution Our group has developed the protocol fr human born fat development
Collaborator Contribution Prof. Kathryn Lilley (Univ of Cambridge): Collaboration and use of the Proteomics Centre facilities to perform LOPT proteomic analyses on differentiating stem cell-derived brown adipocytes at different stages. Prof. Julio Saez-Rodriguez (Univ of Heidelberg): Development and use of integration methods (mainly COSMOSR) for the combined analysis of omic data. Dr. Maria Chondronikola (UC Davis): Contribution to prioritisation/validation of targets using transcriptomic and clinical data from obese women exposed to cold. Dr Stefania Carobbio (CIPF) experiments with White and brown differentiation Dr Francesco Napolitano, KAUST, Saudi Arabia, bioinformatic analysis for repositioning. Dr Davide Chiarugi, Max Plnk. Bioinformatics
Impact This is a multidisciplinary collaboration combining cell biology and proteomics, bioinformatics
Start Year 2021
 
Description BAT analysis 
Organisation University of California, Davis
Department UC Davis Genome Cente
Country United States 
Sector Academic/University 
PI Contribution Our group has developed the protocol fr human born fat development
Collaborator Contribution Prof. Kathryn Lilley (Univ of Cambridge): Collaboration and use of the Proteomics Centre facilities to perform LOPT proteomic analyses on differentiating stem cell-derived brown adipocytes at different stages. Prof. Julio Saez-Rodriguez (Univ of Heidelberg): Development and use of integration methods (mainly COSMOSR) for the combined analysis of omic data. Dr. Maria Chondronikola (UC Davis): Contribution to prioritisation/validation of targets using transcriptomic and clinical data from obese women exposed to cold. Dr Stefania Carobbio (CIPF) experiments with White and brown differentiation Dr Francesco Napolitano, KAUST, Saudi Arabia, bioinformatic analysis for repositioning. Dr Davide Chiarugi, Max Plnk. Bioinformatics
Impact This is a multidisciplinary collaboration combining cell biology and proteomics, bioinformatics
Start Year 2021
 
Description BAT analysis 
Organisation University of Cambridge
Country United Kingdom 
Sector Academic/University 
PI Contribution Our group has developed the protocol fr human born fat development
Collaborator Contribution Prof. Kathryn Lilley (Univ of Cambridge): Collaboration and use of the Proteomics Centre facilities to perform LOPT proteomic analyses on differentiating stem cell-derived brown adipocytes at different stages. Prof. Julio Saez-Rodriguez (Univ of Heidelberg): Development and use of integration methods (mainly COSMOSR) for the combined analysis of omic data. Dr. Maria Chondronikola (UC Davis): Contribution to prioritisation/validation of targets using transcriptomic and clinical data from obese women exposed to cold. Dr Stefania Carobbio (CIPF) experiments with White and brown differentiation Dr Francesco Napolitano, KAUST, Saudi Arabia, bioinformatic analysis for repositioning. Dr Davide Chiarugi, Max Plnk. Bioinformatics
Impact This is a multidisciplinary collaboration combining cell biology and proteomics, bioinformatics
Start Year 2021
 
Description Diamond 
Organisation Diamond Light Source
Country United Kingdom 
Sector Private 
PI Contribution Imaging analysis of BAT stem cells and liver cells
Collaborator Contribution Technological support for imaging
Impact Multidisciplinary collaboration. Data being genetared
Start Year 2023
 
Description Joint Unit CIPF-CAMBRIDGE Obesity and Metabolic Regulation 
Organisation Microsoft Research
Department Microsoft Research Cambridge
Country United Kingdom 
Sector Private 
PI Contribution Genetic engineering of human pluripotent stem cells
Collaborator Contribution Validation of Phenotyping of cells (CIPF). KAUST (AI Application to identify reposition of compounds) Microsoft Cambridge (Bioinformatic Analysis) Cite s
Impact Generation of gene-corrected human induced pluripotent stem cell lines derived from retinitis pigmentosa patient with Ser331Cysfs*5 mutation in MERTK. Artero Castro A, Long K, Bassett A, Machuca C, León M, Ávila-Fernandez A, Cortón M, Vidal-Puig T, Ayuso C, Lukovic D, Erceg S. Stem Cell Res. 2019 Jan;34:101341. doi: 10.1016/j.scr.2018.11.003. Epub 2018 Nov 16. PMID: 30612079 Free Article Artero Castro A, Long K, Bassett A, Machuca C, León M, Ávila-Fernandez A, Cortón M, Vidal-Puig T, Ayuso C, Lukovic D, Erceg S.Generation of gene-corrected human induced pluripotent stem cell lines derived from retinitis pigmentosa patient with Ser331Cysfs*5 mutation in MERTK Stem Cell Res. 2019 Jan;34:101341. doi: 10.1016/j.scr.2018.11.003. Epub 2018 Nov 16. PMID: 30612079 Free article. 2 Carobbio S, Guenantin AC, Bahri M, Rodriguez-Fdez S, Honig F, Kamzolas I, Samuelson I, Long K, Awad S, Lukovic D, Erceg S, Bassett A, Mendjan S, Vallier L, Rosen BS, Chiarugi D, Vidal-Puig A.Unraveling the developmental roadmap toward human brown adipose tissue. Stem Cell Reports. 2021 Feb 6:S2213-6711(21)00043-6. doi: 10.1016/j.stemcr.2021.01.013. Online ahead of print. PMID: 33606988 Free article.enetic engineering of Cell Recent developments in adipose tissue-secreted factors and their target organs. Navarro-Perez J, Vidal-Puig A, Carobbio S. Curr Opin Genet Dev. 2023 Jun;80:102046. doi: 10.1016/j.gde.2023.102046. Epub 2023 Apr 24. PMID: 37099831 Semaphorin 4B is an ADAM17-cleaved adipokine that inhibits adipocyte differentiation and thermogenesis. Amin A, Badenes M, Tüshaus J, de Carvalho É, Burbridge E, Faísca P, Trávnícková K, Barros A, Carobbio S, Domingos PM, Vidal-Puig A, Moita LF, Maguire S, Stríšovský K, Ortega FJ, Fernández-Real JM, Lichtenthaler SF, Adrain C. Mol Metab. 2023 Jul;73:101731. doi: 10.1016/j.molmet.2023.101731. Epub 2023 Apr 28. Adipose Tissue Dysfunction Determines Lipotoxicity and Triggers the Metabolic Syndrome: Current Challenges and Clinical Perspectives. Carobbio S, Pellegrinelli V, Vidal-Puig A. Adv Exp Med Biol. 2024;1460:231-272. doi: 10.1007/978-3-031-63657-8_8. Differentiation of Human Pluripotent Stem Cells (hPSCs) into Brown-Like Adipocytes. Carobbio S, Vidal-Puig A. Methods Mol Biol. 2023;2662:1-9. doi: 10.1007/978-1-0716-3167-6_1. PMID: 37076666
Start Year 2017
 
Description Joint Unit CIPF-CAMBRIDGE Obesity and Metabolic Regulation 
Organisation Regional Government of Valencia
Department Príncipe Felipe Research Centre (CIPF)
Country Spain 
Sector Academic/University 
PI Contribution Genetic engineering of human pluripotent stem cells
Collaborator Contribution Validation of Phenotyping of cells (CIPF). KAUST (AI Application to identify reposition of compounds) Microsoft Cambridge (Bioinformatic Analysis) Cite s
Impact Generation of gene-corrected human induced pluripotent stem cell lines derived from retinitis pigmentosa patient with Ser331Cysfs*5 mutation in MERTK. Artero Castro A, Long K, Bassett A, Machuca C, León M, Ávila-Fernandez A, Cortón M, Vidal-Puig T, Ayuso C, Lukovic D, Erceg S. Stem Cell Res. 2019 Jan;34:101341. doi: 10.1016/j.scr.2018.11.003. Epub 2018 Nov 16. PMID: 30612079 Free Article Artero Castro A, Long K, Bassett A, Machuca C, León M, Ávila-Fernandez A, Cortón M, Vidal-Puig T, Ayuso C, Lukovic D, Erceg S.Generation of gene-corrected human induced pluripotent stem cell lines derived from retinitis pigmentosa patient with Ser331Cysfs*5 mutation in MERTK Stem Cell Res. 2019 Jan;34:101341. doi: 10.1016/j.scr.2018.11.003. Epub 2018 Nov 16. PMID: 30612079 Free article. 2 Carobbio S, Guenantin AC, Bahri M, Rodriguez-Fdez S, Honig F, Kamzolas I, Samuelson I, Long K, Awad S, Lukovic D, Erceg S, Bassett A, Mendjan S, Vallier L, Rosen BS, Chiarugi D, Vidal-Puig A.Unraveling the developmental roadmap toward human brown adipose tissue. Stem Cell Reports. 2021 Feb 6:S2213-6711(21)00043-6. doi: 10.1016/j.stemcr.2021.01.013. Online ahead of print. PMID: 33606988 Free article.enetic engineering of Cell Recent developments in adipose tissue-secreted factors and their target organs. Navarro-Perez J, Vidal-Puig A, Carobbio S. Curr Opin Genet Dev. 2023 Jun;80:102046. doi: 10.1016/j.gde.2023.102046. Epub 2023 Apr 24. PMID: 37099831 Semaphorin 4B is an ADAM17-cleaved adipokine that inhibits adipocyte differentiation and thermogenesis. Amin A, Badenes M, Tüshaus J, de Carvalho É, Burbridge E, Faísca P, Trávnícková K, Barros A, Carobbio S, Domingos PM, Vidal-Puig A, Moita LF, Maguire S, Stríšovský K, Ortega FJ, Fernández-Real JM, Lichtenthaler SF, Adrain C. Mol Metab. 2023 Jul;73:101731. doi: 10.1016/j.molmet.2023.101731. Epub 2023 Apr 28. Adipose Tissue Dysfunction Determines Lipotoxicity and Triggers the Metabolic Syndrome: Current Challenges and Clinical Perspectives. Carobbio S, Pellegrinelli V, Vidal-Puig A. Adv Exp Med Biol. 2024;1460:231-272. doi: 10.1007/978-3-031-63657-8_8. Differentiation of Human Pluripotent Stem Cells (hPSCs) into Brown-Like Adipocytes. Carobbio S, Vidal-Puig A. Methods Mol Biol. 2023;2662:1-9. doi: 10.1007/978-1-0716-3167-6_1. PMID: 37076666
Start Year 2017
 
Description New Tissue Culture system 
Organisation University of Cambridge
Country United Kingdom 
Sector Academic/University 
PI Contribution Establishment of a physiological culture system to improve translation in metabolic research
Collaborator Contribution Daniel Fazakerley: Expertise in signalling Sam virtue: Expertise in Tissue culture Christian Frezza: Expertise in Metabolomics Research Interests
Impact This is a multi collaborative collaboration to improve tissue culture and contributes to 3R
Start Year 2021
 
Description 6. Shenyang, China. 20th-23rd September 2024. International Conference on the Comprehensive Life Course Prevention and Treatment of Obesity and Related Chronic Diseases. 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact 6. Shenyang, China. 20th-23rd September 2024. International Conference on the Comprehensive Life Course Prevention and Treatment of Obesity and Related Chronic Diseases.
Year(s) Of Engagement Activity 2024
 
Description Athens, Greece. 24th June 2024. Federation of European Pharmacological Societies (EPHAR) Symposium 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact 8. Athens, Greece. 24th June 2024. Federation of European Pharmacological Societies (EPHAR) Symposium
Year(s) Of Engagement Activity 2024
 
Description Istanbul, Turkey. 13th-16th May 2023. 25th European Congress of Endocrinology (ECE 2023). 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact 2. Istanbul, Turkey. 13th-16th May 2023. 25th European Congress of Endocrinology (ECE 2023).
Year(s) Of Engagement Activity 2023
URL https://www.ese-hormones.org/education-and-training/european-congress-of-endocrinology/
 
Description Lille, France. 26th April 2024. EGID seminar series in Lille. 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact 10. Lille, France. 26th April 2024. EGID seminar series in Lille.
Year(s) Of Engagement Activity 2024
 
Description Nanjing, China. 2nd December 2024. Forum Cambridge Nanjing Forum Biomedical Innovation and Cooperation. 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact Nanjing, China. 2nd December 2024. Forum Cambridge Nanjing Forum Biomedical Innovation and Cooperation.
Year(s) Of Engagement Activity 2024
 
Description Turku, Finland. 29th-30th August 2024. 33rd Biocity Symposium "Unleashing the Power of Metabolism" 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact Turku, Finland. 29th-30th August 2024. 33rd Biocity Symposium "Unleashing the Power of Metabolism"
Year(s) Of Engagement Activity 2024
 
Description Zurich, Switzerland (virtual). 17th May 2024. Webinar "CTEC Webinar Series", Cardiology Department, Zurich University Hospital 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Zurich, Switzerland (virtual). 17th May 2024. Webinar "CTEC Webinar Series", Cardiology Department, Zurich University Hospital
Year(s) Of Engagement Activity 2024