Canada_IPAP: Application of Hydroxyl radical process and phage biosanitizers to reduce the spread of AMR pathogens in the poultry chain.

Lead Research Organisation: University of Nottingham
Department Name: School of Veterinary Medicine and Sci

Abstract

Through this project we are proposing two innovative technologies to be used to stop the spread of AMR pathogens in poultry chain viz. Hydroxyl radicals' technology from Canada, and a phage biosanitizer technology from the UK. Although aqueous-based hydroxyl radical systems are used frequently, the application in the gas phase is a relatively new development and hence more in-depth studies on the effectiveness of gas phase version on food commodities and their environments is needed. Poultry chain effectiveness will address AMR pathogens in the poultry chain. Late Prof William Waites of the University of Nottingham, UK was the first to see the potential of gas phase Advanced Oxidation Process (AOP) in food processing. The gas phase-hydroxyl radical process generates highly antimicrobial vapour through the ultraviolet light mediated degradation of hydrogen peroxide and ozone. The radicals inactivate microbes without leaving toxic residues. The technology is flexible and can be applied in the form of a tunnel, batch system or handheld device. In this project we will use Hydroxyl radicals to disinfect poultry environments, eggs, crates, poultry meat etc. The hydroxyl-radical treatment can effectively inactivate pathogens although there is no residual antimicrobial activity. Therefore, the application of bacteriophage post-hydroxyl radical treatment will act to prevent pathogens becoming re-established on the disinfected surface. Research by our Canadian partner has demonstrated effective AOP decontamination over a diverse range of fruit and vegetable types with an added benefit of extending shelf-life. Their current research has applied the same method for decontaminating shelled eggs, crates and poultry meat. Within the hatchery studies it has been demonstrated that the hydroxyl radical process can inactivate of Salmonella within 10s (5 log CFU reduction) without effecting the egg integrity or embryo development.

Bacteriophages (phages in short) are naturally occurring bacterial viruses which specifically infect and kill bacteria leaving good microbes alone. This ability of the phages is being harnessed in controlling bacteria in various settings. The major concern for environmental application is method of application and viability of phages especially of the tailed phages. This project will explore the sustainable method of phage application through dry phage powder which could be dissolved into water during field application and also check the viability of tailed phages compared to non-tailed phages. Moreover, the strains of Salmonella and Campylobacter that will be targeted are the most prevalent in the UK and Canada which will be beneficial to the poultry chains in both the countries. The novelty of our dry phage powder approach lies in the development of cutting-edge prototype stable phage products that can be easily and cheaply incorporated into water for environmental spraying, or applied directly to animal carcasses to remove Salmonella and Campylobacter spp. This is important because traditionally phage products are unstable, and difficult to deliver to animals or applied to meat products, and thus potential benefits of using phages have been overshadowed by these hurdles needed to translate the science into a viable commercial product. The reason for using spray dried phages is that the technique is a highly scalable, widely used, efficient and inexpensive method. A stable phage product negates the need for complicated storage and it removes barriers for delivery. The feasibility of this method to produce powdered phages has already been proven in studies assessing the potential of processing into powders.

We will integrate these two technologies wherein Hydroxyl radical technology (vapour based which is able to provide whole volume including air disinfection) and phage biosanitizers to control recontamination from re-introduction of day-of-hatch chicks into the environment would be possible.

Technical Summary

Two innovative technologies viz. hydroxyl ion disinfection and phage dry powder as a biosanitizer are core part of this collaborative project. We would put efforts to bring clear synergy between these two technologies to tackle AMR in poultry chain.

Although aqueous-based hydroxyl radical systems are used frequently, the application in the gas phase is a relatively new development and hence more in-depth studies on the effectiveness of gas phase version on food commodities and their environments is needed. Poultry chain effectiveness will address AMR pathogens in the poultry chain. This process is based on the UV mediated degradation of hydrogen peroxide and ozone gas generating antimicrobial vapour. Studies with the hydroxyl-radical treatment will focus on engineering designs and operating parameters to be applied to the different settings of the poultry chain. This will enable the design of the gas-phase advanced oxidation process unit by our Canadian industrial partner to be validated in field trials.

We will also use dry powder phage biosanitizers to specifically tackle strategically important bacteria in poultry environment such as Salmonella spp and Campylobacter spp. Mainly, optimise formulation (determine suitable excipients) and spray drying parameters to minimise phage loss during spray drying and upon long term storage at both refrigerated and ambient conditions. Prior to this, the most active phages against a selection of Salmonella and Campylobacter isolates that are most prevalent in the UK and Canada would be characterized biologically, physically and genomically. Cocktail of phages will be formulated for broad spectrum activity and then field studies would be carried for evaluating the efficacy (of tailed Vs non-tailed phages) in poultry chain by spraying phages after dissolving dry phage powder into water.

This is a translational proof-of-concept study that combines above two novel approaches to control AMR pathogens in poultry chain.

Publications

10 25 50
 
Title Recruitment, phage characterisation data and preparation for hydroxyl radical ion technology transfer 
Description During the recruitment phase, we could not find a local candidate for Research Technician position recruitment in spite of open advertisement and hence we had to recruit international candidate and her joining was delayed due to visa process. Owing to this the start of this project was delayed to October 2023 and since then we have been successful in obtaining and isolating phages specific to Salmonella and Campylobacter spp. which are being characterised. Initially, we secured 5 Salmonella specific phages from our research partners i.e. Loughborough University through their existing collaborations. We also secured 4 Campylobacter specific phages from the National Collection of Type Cultures (NCTC) operated by the UK Health Security Agency (UKHSA) utilising national resources. Further, we have so far isolated 22 Salmonella spp. phages and 3 Campylobacter spp. phages from the environmental samples. The environmental sampling is ongoing for hunting new phages. We have completed the lytic spectra on of the available phages and have narrowed down on to phages having broad host ranges. The phage DNA of the selected candidate phages has been extracted for sequencing purpose which will be done soon. The sequencing will let us know any deleterious genes pertaining to lysogeny. Once the genome data is annotated, we will further select strictly lytic phages for the electron microscopy to see their morphology. Electron microscopy will be undertaken within the month of March 2024. We have also started the one step growth curve studies to ascertain the burst size of the candidate phages under study. Apart from the phage side we have started the ball rolling for the shipment of the 'Clean Works Sanitation unit' which was agreed by our Canadian industrial partner i.e. Clean Works Corp (https://cleanworkscorp.com/about/) as an 'In-Kind' support. Post arrival of the shipment we will proceed with hydroxyl ion disinfection studies. 
Type Of Material Database/Collection of data 
Year Produced 2024 
Provided To Others? No  
Impact We have recruited one research technician at the University of Nottingham towards fulfilling the UKRI-BBSRC strategic vision of providing opportunities to technicians. We have put few steps forward i.e. phage characterisation work is being done towards development of phage dry powder as a biosanitizers to specifically tackle strategically important bacteria in poultry environment such as Salmonella spp and Campylobacter spp. This pump prime collaboration between the UK and Canada in antimicrobial resistance would underpin efforts to collaborate for mutually beneficial AMR research. The Canadian partner has on-going research into the application of gas phase-hydroxyl radical process that has demonstrated efficacy to control pathogens on hatchery eggs, contact surfaces and meat. By collaborating the UK partners will have access to the hydroxyl ion disinfection technology. Moreover, the project will form links with Canadian industrial partner Clean Works Corporation (CWC), Canada that have commercialized the technology and their participation can initiate research within the UK. 
 
Description University of Guelph, Canada 
Organisation University of Guelph
Country Canada 
Sector Academic/University 
PI Contribution The collaborators are our Canadian partners on Canada-IPAP grant.
Collaborator Contribution The Canadian partner has on-going research into the application of gas phase-hydroxyl radical process that has demonstrated efficacy to control pathogens on hatchery eggs, contact surfaces and meat. By collaborating the UK partners will have access to the hydroxyl ion disinfection technology.
Impact Prof Keith Warriner has already provided guidelines towards the experiments to be run on the application of gas phase-hydroxyl radical process. He has also provided support in getting Canadian industrial partner on board.
Start Year 2023
 
Description University of Loughborough, UK 
Organisation Loughborough University
Country United Kingdom 
Sector Academic/University 
PI Contribution Loughborough University (LU) will develop a dry phage powder using existing technology.
Collaborator Contribution LU has already secured five Salmonella specific phages through their collaborators at Official Phage Laboratory of the CECAV (https://cecav.es/), Spain
Impact Five five Salmonella specific phage characterisation is underway.
Start Year 2023