Engineering Biology Hub for Microbial Food
Lead Research Organisation:
Imperial College London
Department Name: Bioengineering
Abstract
We propose the creation of an Engineering Biology Hub for Microbial Foods. The aim of the Hub is to harness the joint potential of two important scientific fields - engineering biology and microbial foods - in order to transform our existing food production system into one that is better for the environment, more resilient to climatic or political shocks, and that gives consumers healthier and tastier products.
Background: Current food systems are unsustainable. Traditional farming and agriculture contribute significantly to climate change, and this is exacerbated by the alarming levels of food waste. Damage to the planet is mirrored by impacts on human health: a significant portion of the global population suffers malnutrition, while diseases linked to ultra-processed and high-calorie diets continue to rise. The way we produce and consume food has to change, and to change quickly if we are to have any chance of meeting targets for clean growth. Microbial foods - produced by microorganisms like yeast and fungi - offer a way to make this urgently needed transformation.
Microbial foods are produced using different types of fermentation, with this process employed to produce large quantities of protein and other nutrients (biomass fermentation), to modulate and process plant and animal-derived products (traditional fermentation) or to produce new food ingredients (precision fermentation). Microbes grow rapidly, don't need large amounts of land or water to grow, and can use food by-products ('food waste') as feedstocks. In addition, microbial foods are less affected by adverse weather and can be produced locally - reducing transport costs, carbon footprint, and our dependence on food imports.
Engineering biology applies engineering principles to biology, enabling scientists to build and manufacture novel biological systems and products. Tools from engineering biology have recently been applied to optimise microbial food production, and microbes can now be manipulated to be more productive, tastier and more nutritious. Applying engineering biology to microbial foods has the potential to radically change the way food is produced, and this creates an important and timely opportunity to address some of the most critical health and sustainability challenges of our time.
The Hub:
The first of its kind in the world, the new Hub will build on the UK's world-leading expertise and facilities in engineering biology and microbial foods. It will bring together academics, industrial partners, food organisations and consumers in a wide-ranging and ambitious programme of work that creates a clear route from scientific research to new food products on the shelf.
At the heart of the Hub's activity will be eleven research projects, each addressing a separate challenge that needs to be overcome if large-scale production of diverse microbial food products is to be achieved. Project will use cutting-edge engineering biology methods, and will benefit from the Hub's additional focus on education, regulation and commercialisation, to ensure research outputs are translated into meaningful benefits.
Overall, our objectives are :
- To advance research into how engineering biology can be used to produce microbial foods
- To develop new capabilities for developing microbial foods using engineering biology
- To open new routes for this research to benefit human health and environmental sustainability
Meeting these objectives will establish the Hub as an internationally-recognised reference for research, innovation and translation in the application of engineering biology to microbial foods - demonstrating UK leadership in this field, attracting the best global talent, and delivering more sustainable, productive, resilient and healthy food systems.
Background: Current food systems are unsustainable. Traditional farming and agriculture contribute significantly to climate change, and this is exacerbated by the alarming levels of food waste. Damage to the planet is mirrored by impacts on human health: a significant portion of the global population suffers malnutrition, while diseases linked to ultra-processed and high-calorie diets continue to rise. The way we produce and consume food has to change, and to change quickly if we are to have any chance of meeting targets for clean growth. Microbial foods - produced by microorganisms like yeast and fungi - offer a way to make this urgently needed transformation.
Microbial foods are produced using different types of fermentation, with this process employed to produce large quantities of protein and other nutrients (biomass fermentation), to modulate and process plant and animal-derived products (traditional fermentation) or to produce new food ingredients (precision fermentation). Microbes grow rapidly, don't need large amounts of land or water to grow, and can use food by-products ('food waste') as feedstocks. In addition, microbial foods are less affected by adverse weather and can be produced locally - reducing transport costs, carbon footprint, and our dependence on food imports.
Engineering biology applies engineering principles to biology, enabling scientists to build and manufacture novel biological systems and products. Tools from engineering biology have recently been applied to optimise microbial food production, and microbes can now be manipulated to be more productive, tastier and more nutritious. Applying engineering biology to microbial foods has the potential to radically change the way food is produced, and this creates an important and timely opportunity to address some of the most critical health and sustainability challenges of our time.
The Hub:
The first of its kind in the world, the new Hub will build on the UK's world-leading expertise and facilities in engineering biology and microbial foods. It will bring together academics, industrial partners, food organisations and consumers in a wide-ranging and ambitious programme of work that creates a clear route from scientific research to new food products on the shelf.
At the heart of the Hub's activity will be eleven research projects, each addressing a separate challenge that needs to be overcome if large-scale production of diverse microbial food products is to be achieved. Project will use cutting-edge engineering biology methods, and will benefit from the Hub's additional focus on education, regulation and commercialisation, to ensure research outputs are translated into meaningful benefits.
Overall, our objectives are :
- To advance research into how engineering biology can be used to produce microbial foods
- To develop new capabilities for developing microbial foods using engineering biology
- To open new routes for this research to benefit human health and environmental sustainability
Meeting these objectives will establish the Hub as an internationally-recognised reference for research, innovation and translation in the application of engineering biology to microbial foods - demonstrating UK leadership in this field, attracting the best global talent, and delivering more sustainable, productive, resilient and healthy food systems.
Technical Summary
We propose an Engineering Biology Hub for Microbial Foods, integrating world-leading research and innovation, education, translation and commercialisation. The overarching vision is to harness the joint potentials of engineering biology and the microbial food revolution to create and deliver a more sustainable, productive, resilient and healthy food system.
The Hub's research programme encompasses projects focused on 'Applications' (biomass fermentation, traditional fermentation, precision fermentation), and 'Capabilities' (scale-up, artificial intelligence, strain engineering, food technology and nutrition) at the interface of engineering biology and microbial foods. Projects will be underpinned by a range of cutting-edge tools and approaches from engineering biology, including automation, microbial community design, bioprocessing, modelling, systems biology and strain engineering. To ensure research outputs are translated into meaningful change, projects are complemented by a range of different 'Paths' (e.g. commercialisation, education, regulation, communication, etc).
The Hub's objectives across these areas are:
'Applications': To advance engineering biology research to produce microbial foods.
'Capabilities': To develop new capabilities for the development of microbial foods using engineering biology (for the members of the Hub and beyond).
'Paths': To support present and future research into engineering biology for microbial foods, and translation of this research into positive, real-world impacts.
Meeting these three objectives will establish UK leadership in the field, with the Hub an internationally-recognised reference for this application of engineering biology.
The Hub's research programme encompasses projects focused on 'Applications' (biomass fermentation, traditional fermentation, precision fermentation), and 'Capabilities' (scale-up, artificial intelligence, strain engineering, food technology and nutrition) at the interface of engineering biology and microbial foods. Projects will be underpinned by a range of cutting-edge tools and approaches from engineering biology, including automation, microbial community design, bioprocessing, modelling, systems biology and strain engineering. To ensure research outputs are translated into meaningful change, projects are complemented by a range of different 'Paths' (e.g. commercialisation, education, regulation, communication, etc).
The Hub's objectives across these areas are:
'Applications': To advance engineering biology research to produce microbial foods.
'Capabilities': To develop new capabilities for the development of microbial foods using engineering biology (for the members of the Hub and beyond).
'Paths': To support present and future research into engineering biology for microbial foods, and translation of this research into positive, real-world impacts.
Meeting these three objectives will establish UK leadership in the field, with the Hub an internationally-recognised reference for this application of engineering biology.
Organisations
- Imperial College London (Lead Research Organisation)
- Lesaffre Group (Project Partner)
- 3F BIO Ltd (Project Partner)
- FrieslandCampina (Project Partner)
- Centre for Process Innovation (Project Partner)
- Basque Culinary Center (Project Partner)
- RSSL (Reading Scientific Services Ltd) (Project Partner)
- Croda Europe Ltd (Project Partner)
- Analytik Jena UK Ltd (Project Partner)
- Discovery Park Limited (Project Partner)
- QUADRAM INSTITUTE BIOSCIENCE (Project Partner)
- Moolec Science Ltd (Project Partner)
- Re Generation Earth Limited (Project Partner)
- Arc Media Holdings Ltd (Project Partner)
- Mzansi Meat Co. (Project Partner)
- Biocatalysts Ltd (Project Partner)
- J Coller Foundation (Project Partner)
- Chr. Hansen A/S (Project Partner)
- Samworth Brothers (Project Partner)
- Purple Orange Ventures (Project Partner)
- Marlow Ingredients (Project Partner)
- Cargill R&D Centre Europe BVBA (Project Partner)
- Arborea (Project Partner)
- Zayt Bioscience GmbH (Project Partner)
- HERlab Ltd (Project Partner)
- Food Labs (Project Partner)
- Better Dairy Limited (Project Partner)
- Doehler Group SE (International) (Project Partner)
- Tirlan (Project Partner)
- Food Standards Agency (Project Partner)
Publications
Chen W
(2024)
Synthetic, marine, light-driven, autotroph-heterotroph co-culture system for sustainable ß-caryophyllene production.
in Bioresource technology
Park Y
(2025)
Efficient biosynthesis of ß-caryophyllene by engineered Yarrowia lipolytica
in Microbial Cell Factories
Park YK
(2024)
Engineered cross-feeding creates inter- and intra-species synthetic yeast communities with enhanced bioproduction.
in Nature communications
Rafieenia R
(2025)
Designing synthetic microbial communities with the capacity to upcycle fermentation byproducts to increase production yields.
in Trends in biotechnology
Zheng X
(2025)
Metabolic Engineering of Rhodotorula toruloides for the Production of Linalool
in Journal of Agricultural and Food Chemistry
Zhou T
(2025)
Metabolic engineering of Yarrowia lipolytica for the production and secretion of the saffron ingredient crocetin.
in Biotechnology for biofuels and bioproducts
| Description | House of Lords paper -Science and Technology Committee Don't fail to scale: seizing the opportunity of engineering biology - |
| Geographic Reach | National |
| Policy Influence Type | Participation in a guidance/advisory committee |
| URL | https://publications.parliament.uk/pa/ld5901/ldselect/ldsctech/55/5505.htm |
| Description | The Microbial Hub Managing Team were invited to take part in the cell cultivated products (CCP) sandbox initiative |
| Geographic Reach | National |
| Policy Influence Type | Contribution to a national consultation/review |
| URL | https://www.food.gov.uk/news-alerts/news/groundbreaking-sandbox-programme-for-cell-cultivated-produc... |
| Description | Expert Network for Novel Foods Regulatory Challenges - UK's first collaboration cluster to support best practice and facilitate the regulatory approval journey of innovative food ingredients |
| Amount | £50,000 (GBP) |
| Funding ID | 10114832 |
| Organisation | Innovate UK |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2024 |
| End | 08/2024 |
| Description | a plenary talk at Gordon Research Conference - Plant Lipids - by Dr Peter Eastmond , Rothamsted Research |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Postgraduate students |
| Results and Impact | Peter Eastmond from Rothamsted Research gave a plenary talk at Gordon Research Conference - Plant Lipids: Structure, Metabolism and Function Gordon Research Conference, January 26 - 31, 2025 titled: '"Building Milk Fats From the Ground up Using Metabolons, Multifunctional Proteins and Enzyme Cascades". |
| Year(s) Of Engagement Activity | 2025 |
| URL | https://www.grc.org/plant-lipids-structure-metabolism-and-function-conference/2025/ |
