Grain development in Brachypodium distachyon (NatGrain)
Lead Research Organisation:
John Innes Centre
Department Name: UNLISTED
Abstract
Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.
Technical Summary
Grasses are one of the most important groups of plants for human well-being: Domesticated grasses constitute the major source of dietary calories and wild species define many terrestrial ecosystems. The major cereals evolved from wild grasses during the last 10,000 years as the result of human selection for traits that improved their utility for humans. The biology of wild grasses is poorly understood either at a population level or in terms of the traits that underpin their success. This project exploits the new genomic resources and advanced imaging techniques to investigate the cellular, molecular and genetic basis of natural variation in Brachypodium. We will focus on variation in grain-related traits associated with cell proliferation and cell growth. For example, grain size is an important trait in agriculture, often associated with yield, and its regulation is poorly understood.
Planned Impact
unavailable
People |
ORCID iD |
| John Doonan (Principal Investigator) |
Publications
Betekhtin A
(2018)
Cell Wall Epitopes and Endoploidy as Reporters of Embryogenic Potential in Brachypodium Distachyon Callus Culture.
in International journal of molecular sciences
Bettgenhaeuser J
(2017)
Natural Variation in Brachypodium Links Vernalization and Flowering Time Loci as Major Flowering Determinants.
in Plant physiology
Fisher LH
(2016)
Linking Dynamic Phenotyping with Metabolite Analysis to Study Natural Variation in Drought Responses of Brachypodium distachyon.
in Frontiers in plant science
Opanowicz M
(2011)
Endosperm development in Brachypodium distachyon.
in Journal of experimental botany
Vain P
(2011)
A T-DNA mutation in the RNA helicase eIF4A confers a dose-dependent dwarfing phenotype in Brachypodium distachyon
in The Plant Journal
| Description | Several QTL have been associated with variation in different traits including flowering time, disease resistance, grain traits and plant architecture |
| Exploitation Route | They are being used to map similar traits in the forage grasses |
| Sectors | Agriculture Food and Drink Environment |
| URL | https://www.ncbi.nlm.nih.gov/pubmed/27650449 |
| Description | Using Brachypodium as a model to study adaptation, growth and evolution in grass |
| Amount | £155,000 (GBP) |
| Funding ID | F00424R |
| Organisation | The Leverhulme Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 05/2010 |
| End | 06/2014 |
| Title | ABR6 x Bd21 Mapping Population |
| Description | Recombination Inbred population of over 100 lines, each genotyped at the F4/5 and F8/9 generations. has been shared with several labs in UK and USA |
| Type Of Material | Biological samples |
| Year Produced | 2018 |
| Provided To Others? | Yes |
| Impact | Grant Award 2019 from JGI USA for Community Project, based on this resource |
| URL | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210709/ |
| Description | Community Science Project |
| Organisation | U.S. Department of Energy |
| Department | Genome-Enabled Plant Biology for Determination of Gene Function |
| Country | United States |
| Sector | Public |
| PI Contribution | we provided samples from grass to DOE |
| Collaborator Contribution | they provided sequence information on genomes and transcriptomes |
| Impact | manuscript in advanced draft |
| Start Year | 2017 |