TGAC NCG: National Genomics Facility
Lead Research Organisation:
Earlham Institute
Department Name: UNLISTED
Abstract
The Genome Analysis Cent re provides access for the UK bioscience research community to high throughput sequencing technologies and bioinformatics expertise in data management, analysis and interpretation. The Centre operates multiple next generation sequencing plat forms and has installed a computing infrastructure to support the management, assembly and annotation of large sequence data sets. Working in collaboration and partnership with other BBSRC Institutes, BBSRC-funded or other grant-funded investigators and industry TGAC will: (i) undertake large-scale projects addressing BBSRC priority areas that requi re signi ficant sequencing and/or bioinformatics capacity and capability (e.g. de novo sequencing, annotation and variant analysis of important crop genomes or microbes being exploited for biological resources); (ii) undertake pilot projects to evaluate and underpin novel genomics -based research; (iii) provide access to specialist technology platforms; and (iv) enable applications requiring specialist bioinformatics expertise and large computing infrastructure. TGAC will continue to develop new software methods and tools to address community needs
and will apply these to enhance the quality and usability of community resources. The NCG will support the delivery of these activities by the core sequencing and bioinformatics teams and incorporate innovative approaches propelled by the technology development and bioinformatics research teams. It will also underpin the ISPG research programmes in novel bioinformatics tool development and exploiting novel computing infrastructure opportunities, in addition to providing opportunities to work more closely with industry through the KEC programme.
and will apply these to enhance the quality and usability of community resources. The NCG will support the delivery of these activities by the core sequencing and bioinformatics teams and incorporate innovative approaches propelled by the technology development and bioinformatics research teams. It will also underpin the ISPG research programmes in novel bioinformatics tool development and exploiting novel computing infrastructure opportunities, in addition to providing opportunities to work more closely with industry through the KEC programme.
Organisations
- Earlham Institute, United Kingdom (Lead Research Organisation)
- University of Huddersfield, United Kingdom (Collaboration)
- James Hutton Institute (Collaboration)
- University of Warwick, United Kingdom (Collaboration)
- Rothamsted Research, United Kingdom (Collaboration)
- John Innes Centre, United Kingdom (Collaboration)
- University of East Anglia, United Kingdom (Collaboration)
- University of Cambridge, United Kingdom (Collaboration)
- University of California Davis, United States (Collaboration)
- Quadram Institute Bioscience, Norwich (Collaboration)
- University of York, United Kingdom (Collaboration)
- University of Dundee, United Kingdom (Collaboration)
- University of Greenwich, United Kingdom (Collaboration)
- Institute Of Cardiometabolism And Nutrition (Collaboration)
- University of Sussex, United Kingdom (Collaboration)
- University of Helsinki, Finland (Collaboration)
- Canterbury Christ Church University, United Kingdom (Collaboration)
- British American Tobacco Plc, United Kingdom (Collaboration)
- Cranfield University, United Kingdom (Collaboration)
People |
ORCID iD |
| Daniel Christopher Swan (Principal Investigator) |
Publications
Abbott JC
(2012)
Strategies towards sequencing complex crop genomes.
in Genome biology
Abdul-Aziz AM
(2017)
MIF-Induced Stromal PKCß/IL8 Is Essential in Human Acute Myeloid Leukemia.
in Cancer research
Abo-Aba SE
(2015)
Draft Genome Sequence of Bacillus Species from the Rhizosphere of the Desert Plant Rhazya stricta.
in Genome announcements
Afgan E
(2016)
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update
in Nucleic Acids Research
Ahmed A
(2015)
A Database of microRNA Expression Patterns in Xenopus laevis
in PLOS ONE
Aleksic J
(2014)
An open science peer review oath.
in F1000Research
Aleksic J
(2014)
The Open Science Peer Review Oath
in F1000Research
Alexeyenko A
(2015)
Confrontation of fibroblasts with cancer cells in vitro: gene network analysis of transcriptome changes and differential capacity to inhibit tumor growth.
in Journal of experimental & clinical cancer research : CR
Allaby RG
(2015)
Using archaeogenomic and computational approaches to unravel the history of local adaptation in crops.
in Philosophical transactions of the Royal Society of London. Series B, Biological sciences
Alt DP
(2015)
Complete Genome Sequence of Leptospira interrogans Serovar Bratislava, Strain PigK151.
in Genome announcements
| Description | This grant was primarily to set up the genomics and bioinformatics capability at TGAC and it has been successful as the genomics lab has now delivered 100s of successful projects to the UK community. It has also undertaken projects in rapid response to pathogen outbreaks such as the Ash Die Back pathogen. The Facility has added a very successful single cell genomics component and has continued to develop its technology into long read sequencing, optical mapping and nano pore sequencing. I also continues to provide training to the UK community. |
| Exploitation Route | This is a community resource so it open for the UK community to use. |
| Sectors | Agriculture, Food and Drink,Digital/Communication/Information Technologies (including Software),Pharmaceuticals and Medical Biotechnology |
| URL | http://www.earlham.ac.uk/genomic-services |
| Description | Within the two years of funding and with support from the National Capability (NCG1), EI has delivered a range of resources to mitigate the impact of Ash Die Back disease disease on this species. This includes two high-quality genome sequence assemblies from tolerant and less tolerant trees, allowing the study of phenotypic variation. These assembly required development a new method adapted to species with high levels of heterozygosity. Our data was released into the public domain through the main NORNEX consortium webpage to promote crowdsourcing analysis, and was also provided to researchers as an online BLAST service. has been used to better understand resistance of Ash trees is being used to understand resistance and guide reforestation strategy. One wheat genome sequencing is being used to identify markers for new breeding programs and the algorithms developed are being deployed in contact research for industry and thereby generating income to further support our capability. The media campaign about this project was awarded a special commendation in the BBSRC Excellence with Impact competition 2016, for its publicity and outreach campaign reaching 1 million readers. Furthermore the expertise at EI is disseminated through our training programs and thereby helping to fill skills gaps in the bioscience community. |
| First Year Of Impact | 2013 |
| Sector | Agriculture, Food and Drink,Manufacturing, including Industrial Biotechology |
| Impact Types | Societal,Economic |
| Description | Oral Evidence to House of Commons Science and Technology Committee enquiry on Balance and effectiveness of research and innovation spending |
| Geographic Reach | National |
| Policy Influence Type | Gave evidence to a government review |
| URL | https://parliamentlive.tv/Event/Index/4bdf3ff7-d1a6-4605-8b73-aca355bf9f89 |
| Description | submission to UKRI infrastructure review |
| Geographic Reach | National |
| Policy Influence Type | Participation in a national consultation |
| URL | https://www.ukri.org/files/infrastructure/progress-report-summary-document-final-march-2019-pdf/ |
| Description | BBR - CerealsDB: A community resource for wheat genomics |
| Amount | £144,052 (GBP) |
| Funding ID | BB/L024144/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 08/2014 |
| End | 07/2018 |
| Description | BBR - RevGenUK the next generation: establishing a TILLING boutique for a UK-based reverse genetics community resource |
| Amount | £187,788 (GBP) |
| Funding ID | BB/I026030/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2012 |
| End | 06/2015 |
| Description | BBRO Open - Discovering the source of sugar beet infection and re-infection by Erysiphe betae |
| Amount | £83,580 (GBP) |
| Organisation | British Beet Research Organisation |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2015 |
| End | 10/2016 |
| Description | BBSRC Big Data Strategic Investment 2014 - Big Data Infrastructure for Crop Genomics |
| Amount | £1,001,143 (GBP) |
| Funding ID | BB/M018458/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 12/2014 |
| End | 06/2016 |
| Description | BBSRC Big Data Strategic Investment 2014 - Establishing the infrastructure for functional annotation of farmed animal genomes |
| Amount | £695,240 (GBP) |
| Funding ID | BB/M01844X/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2015 |
| End | 06/2016 |
| Description | BBSRC Big Data Strategic Investment 2014 - iPLANT |
| Amount | £912,486 (GBP) |
| Funding ID | BB/M018431/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2015 |
| End | 03/2017 |
| Description | BBSRC DNA Synthesis - Building national hardware and software infrastructure for UK DNA Foundries |
| Amount | £315,041 (GBP) |
| Funding ID | BB/M025640/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2015 |
| End | 11/2016 |
| Description | BBSRC DNA Synthesis - DNA Synthesis at the Norwich Research Park |
| Amount | £1,903,000 (GBP) |
| Funding ID | BB/M000966/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 06/2014 |
| End | 03/2016 |
| Description | BBSRC EPSRC Joint Call - OpenPlant: University of Cambridge-John Innes Centre for Synthetic Biology |
| Amount | £311,737 (GBP) |
| Funding ID | BB/L014130/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 05/2016 |
| End | 09/2019 |
| Description | BBSRC/NERC Sustainable Aquaculture Initiative - Genomic approaches to identification and preservation of wild tilapia genetic resources for aquaculture |
| Amount | £73,887 (GBP) |
| Funding ID | BB/M026736/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2015 |
| End | 03/2017 |
| Description | BSBEC-BioMASS - Willow Genome Sequencing & Bioinformatics Integration Project |
| Amount | £124,230 (GBP) |
| Funding ID | BBS/E/T/000GP017 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2012 |
| End | 03/2015 |
| Description | British Council Newton Institutional links - Bioinformatics training for next-generation rice genomics in Vietnam |
| Amount | £51,863 (GBP) |
| Organisation | British Council |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 04/2015 |
| End | 09/2017 |
| Description | Capital Grant contribution towards Seeds of Discovery Programme |
| Amount | £1,000,000 (GBP) |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2015 |
| End | 10/2016 |
| Description | Darwin Tree of Life |
| Amount | £9,360,421 (GBP) |
| Funding ID | 218328/Z/19/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 11/2019 |
| End | 05/2022 |
| Description | Defra Open - Oilseed Rape Genetic Improvement Network (OREGIN) |
| Amount | £13,702 (GBP) |
| Funding ID | CH0104 |
| Organisation | Department For Environment, Food And Rural Affairs (DEFRA) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2015 |
| End | 01/2017 |
| Description | Defra/BBSRC An open consortium (Nornex1) for molecular understanding of ash dieback disease |
| Amount | £2,302,345 (GBP) |
| Funding ID | BBS/E/J/000CA523 |
| Organisation | Research Councils UK (RCUK) |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2013 |
| End | 08/2015 |
| Description | Development of a highly accurate DNA methylation classifier for prevalent and incident cervical pre-cancer |
| Amount | £129,358 (GBP) |
| Funding ID | A21070 |
| Organisation | Cancer Research UK |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 03/2016 |
| End | 02/2019 |
| Description | ELIXIR European life science infrastructure for biological information - ELIXIR-UK Coordination Office |
| Amount | £767,420 (GBP) |
| Funding ID | BB/P017193/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2016 |
| End | 10/2020 |
| Description | FP7 Collaborative Project - Wheat and barley Legacy for Breeding Improvement |
| Amount | £268,645 (GBP) |
| Funding ID | 613556 |
| Organisation | European Commission |
| Sector | Public |
| Country | European Union (EU) |
| Start | 01/2014 |
| End | 12/2018 |
| Description | FP7 MC International Research Staff Exchange Scheme - Developing an European American NGS Network |
| Amount | £122,769 (GBP) |
| Funding ID | 612583 |
| Organisation | European Commission |
| Sector | Public |
| Country | European Union (EU) |
| Start | 01/2014 |
| End | 12/2017 |
| Description | FSA OPEN - Generating tools for the Molecular Epidemiology of Campylobacter coli by next generation genome sequencing |
| Amount | £54,908 (GBP) |
| Organisation | Food Standards Agency (FSA) |
| Sector | Public |
| Country | United Kingdom |
| Start | 07/2013 |
| End | 06/2015 |
| Description | Follow On Fund - Utilising Illumina sequencing for high throughput genotyping of wheat |
| Amount | £147,471 (GBP) |
| Funding ID | BB/P004857/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2017 |
| End | 06/2018 |
| Description | Follow On Fund Pathfinder - Air-seq: A method for early detection of any biological threats |
| Amount | £9,900 (GBP) |
| Funding ID | BB/N020251/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2016 |
| End | 08/2016 |
| Description | Follow On Fund Pathfinder - CropQuant - Next-generation cost-effective crop monitoring system for breeding, crop research and digital agriculture |
| Amount | £10,936 (GBP) |
| Funding ID | BB/P028160/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2017 |
| End | 08/2017 |
| Description | Grand Challenges Research Fund (GCRF) Data & Resources (EI) |
| Amount | £646,083 (GBP) |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2016 |
| End | 07/2017 |
| Description | Grand Challenges Research Fund (GCRF) Data & Resources (IBERS) |
| Amount | £161,563 (GBP) |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 12/2016 |
| End | 07/2017 |
| Description | Grand Challenges Research Fund (GCRF) Data & Resources (JIC) |
| Amount | £27,200 (GBP) |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2016 |
| End | 07/2017 |
| Description | H2020 RIA - Research Innovation Action - ELIXIR-EXCELERATE: Fast-track ELIXIR implementation and drive early user exploitation across the life-sciences. |
| Amount | £138,462 (GBP) |
| Funding ID | 676559 |
| Organisation | European Commission H2020 |
| Sector | Public |
| Country | Belgium |
| Start | 09/2015 |
| End | 08/2019 |
| Description | IPA Industrial Partnering Award - Colombia and Kenya Partnering Award: Skills sharing for genomic approaches to forage improvement |
| Amount | £30,366 (GBP) |
| Funding ID | BB/L027011/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2014 |
| End | 11/2016 |
| Description | IPA Industrial Partnering Award - Comparative population genomics of red clover domestication and improvement |
| Amount | £131,567 (GBP) |
| Funding ID | BB/L022257/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 08/2014 |
| End | 08/2017 |
| Description | IPA Industrial Partnering Award - Controlling important diseases in potato by cloning functional NB-LRR-type resistance genes |
| Amount | £204,473 (GBP) |
| Funding ID | BB/L009757/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2014 |
| End | 08/2017 |
| Description | IPA Industrial Partnering Award - Functional genomics of aphid adaption to plant defenses |
| Amount | £276,863 (GBP) |
| Funding ID | BB/L001985/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2014 |
| End | 03/2017 |
| Description | IPA Industrial Partnering Award - OctoSEQ- Sequencing the octoploid strawberry |
| Amount | £525,192 (GBP) |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2016 |
| End | 03/2018 |
| Description | IPA Industrial Partnering Award - Using field pathogenomics to study wheat yellow rust dispersal and population dynamics at a national and international scale |
| Amount | £450,254 (GBP) |
| Funding ID | BB/M025519/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 07/2015 |
| End | 06/2018 |
| Description | NRP Seed fund - Metagenomics of pollen for ecological applications |
| Amount | £14,806 (GBP) |
| Organisation | Norwich Research Park |
| Sector | Private |
| Country | United Kingdom |
| Start | 04/2016 |
| End | 03/2017 |
| Description | NRP translational fund - NavigOmix - visualisation and data integration software for the life sciences |
| Amount | £12,085 (GBP) |
| Organisation | Norwich Research Park |
| Sector | Private |
| Country | United Kingdom |
| Start | 11/2016 |
| End | 01/2017 |
| Description | NRP translational fund - Omix Navigator - A Visualisation and Data Integration Software for Life Sciences |
| Amount | £45,779 (GBP) |
| Organisation | Norwich Research Park |
| Sector | Private |
| Country | United Kingdom |
| Start | 06/2015 |
| End | 03/2016 |
| Description | Newton Fund - 14CONFAP From Comparative genomics to Phylogenomics: uncovering the genomic complexity and evolutionary adaptations of twenty species of protozoa |
| Amount | £21,775 (GBP) |
| Funding ID | BB/M029239/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2016 |
| End | 02/2017 |
| Description | Newton fund (Rice research) - Sequencing and exploitation of the genetic diversity in Vietnamese native rice lines to serve research and breeding programs |
| Amount | £177,371 (GBP) |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2016 |
| End | 03/2017 |
| Description | Open plant fund - Establishing Low Cost Microfluidic System for Single Cell Analysis |
| Amount | £5,000 (GBP) |
| Organisation | University of Cambridge |
| Sector | Academic/University |
| Country | United Kingdom |
| Start | 08/2016 |
| End | 01/2017 |
| Description | Open plant fund - Facilitating synthetic biology literature mining and searching for the plant community |
| Amount | £5,000 (GBP) |
| Organisation | University of Cambridge |
| Sector | Academic/University |
| Country | United Kingdom |
| Start | 10/2015 |
| End | 03/2016 |
| Description | RCUK Newton Fund - 14CONFAP From Comparative genomics to Phylogenomics: uncovering the genomic complexity and evolutionary adaptations of twenty species of protozoa |
| Amount | £36,864 (GBP) |
| Funding ID | BB/M029239/1 |
| Organisation | Research Councils UK (RCUK) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2015 |
| End | 12/2016 |
| Description | RCUK Newton Fund - BBSRC-Embrapa Genomics and pathogenomics to improve FHB and brusone resistance in Brazilian wheat |
| Amount | £12,246 (GBP) |
| Funding ID | BB/N004442/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2015 |
| End | 03/2016 |
| Description | Research Grant, BBR Scheme |
| Amount | £1,900,845 (GBP) |
| Funding ID | BB/M01844X/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 02/2015 |
| End | 08/2017 |
| Description | Responsive Mode - Development of computational strategies for identification and characterisation of viruses in metagenomic samples |
| Amount | £307,411 (GBP) |
| Funding ID | BB/M004805/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 12/2014 |
| End | 11/2017 |
| Description | Responsive Mode - Effect of Chromatin modification on meiosis:wheat, a model for polyploid crops |
| Amount | £131,930 (GBP) |
| Funding ID | BB/J009334/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2013 |
| End | 06/2015 |
| Description | Responsive Mode - Molecular basis of foodborne disease risk of variants of Salmonella Typhimurium DT193 and U288 |
| Amount | £52,058 (GBP) |
| Funding ID | BB/M025411/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2015 |
| End | 10/2018 |
| Description | Responsive Mode - The biology and pathogenesis of Deformed Wing Virus, the major virus pathogen of honeybees |
| Amount | £8,365 (GBP) |
| Funding ID | BB/M00337X/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2015 |
| End | 11/2017 |
| Description | Responsive Mode - Use of a self-compatible diploid potato for mutagenesis and forward genetic studies. |
| Amount | £140,317 (GBP) |
| Funding ID | BB/K019090/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2014 |
| End | 03/2017 |
| Description | TGAC Galaxy Asset Development Project and Training |
| Amount | £146,657 (GBP) |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 12/2014 |
| End | 06/2017 |
| Description | TSB - Crop & Livetsock Disease Challenge - Development of magnetometer immunoassay technology to improve screening accuracy and user friendliness with sequencing and resistance information |
| Amount | £200,155 (GBP) |
| Funding ID | TS/M009009/1 BB/N00387X/1 |
| Organisation | Innovate UK |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2015 |
| End | 11/2017 |
| Description | TSB Energy Efficient Computing 2 (ECC II) - Project GENESYS - Energy Efficient DNA Sequence Searches Using a Revolutionary Optical Processor (Innovate UK ref 102260) |
| Amount | £163,352 (GBP) |
| Funding ID | TS/M012433/1 |
| Organisation | Innovate UK |
| Sector | Public |
| Country | United Kingdom |
| Start | 06/2015 |
| End | 05/2017 |
| Description | TSB Feasibility Studies - Integrating omics technologies for natural product antibiotic discovery |
| Amount | £43,106 (GBP) |
| Funding ID | 132210 |
| Organisation | Innovate UK |
| Sector | Public |
| Country | United Kingdom |
| Start | 05/2016 |
| End | 04/2017 |
| Description | Tools & Resources - PopSeqle: Software for Population Sequence data to Lower Errors |
| Amount | £22,130 (GBP) |
| Funding ID | BB/N02317X/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 12/2016 |
| End | 05/2018 |
| Description | Tools & Resources - Rapid in-field Nanopore-based identification of plant and animal pathogens |
| Amount | £150,956 (GBP) |
| Funding ID | BB/N023196/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2016 |
| End | 11/2017 |
| Description | iCASE - Towards genotype-based monitoring for fungicide resistance management |
| Amount | £95,042 (GBP) |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2016 |
| End | 02/2017 |
| Description | sLoLa - Engineering Synthetic Microbial Communities for Biomethane Production |
| Amount | £544,790 (GBP) |
| Funding ID | BBS/E/T/000GP016 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2013 |
| End | 04/2018 |
| Description | sLoLa - Renewable Industrial Products from Rapeseed (RIPR) |
| Amount | £299,973 (GBP) |
| Funding ID | BB/L002124/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2014 |
| End | 12/2018 |
| Description | sLoLa - Triticeae Genomics for Sustainable Agriculture |
| Amount | £2,667,351 (GBP) |
| Funding ID | BB/J003743/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 08/2012 |
| End | 01/2018 |
| Description | sLoLa - Triticeae Genomics for Sustainable Agriculture (additional funds) |
| Amount | £749,867 (GBP) |
| Funding ID | BBS/E/T/000GP034 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2015 |
| End | 01/2017 |
| Description | sLola - Understanding influenza A virus: linking transmission, evolutionary dynamics, pathogenesis and immunity in pigs |
| Amount | £341,158 (GBP) |
| Funding ID | BB/L001330/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2014 |
| End | 03/2019 |
| Title | Development of ChIP-Seq protocols in bread wheat |
| Description | The investigation of epigenetic marks enables deeper understanding of the gene expression regulation and the annotation of non coding functional sequences. Histone modifications (methylation, acetylation) are among the epigenetic marks most commonly assayed and specific modifications can be associated with biochemical activity (transcription, repression) and genomic elements (enhancers, promoters, coding regions). The protocols for chromatin immunoprecipation and sequencing have previously been developed for the model organism Arabidopsis thaliana, but never successfully applied to complex plant genomes such as the bread wheat. The protocols aimed to 1) improve the efficiency of chromatin extraction, 2) assay the antibodies, 3) evaluate yield and suitability of different tissues (leaves, root, spikelet, internode) fresh or frozen. |
| Type Of Material | Technology assay or reagent |
| Year Produced | 2018 |
| Provided To Others? | No |
| Impact | The protocols will enable in depth understanding of gene expression regulation in bread wheat and relative crops. The protocols will directly be used to deliver objectives within the Designing Future Wheat (BBS/E/T/000PR9783), Signatures of Domestication and Adaptation (BBS/E/T/000PR9818), Regulatory interactions and Complex Phenotypes (BBS/E/T/000PR9819) awards. The protocols will be made available to the communities through the Supporting EI's ISPs and the UK Community with Genomics and Single Cell Analysis (BBS/E/T/000PR9816) award. |
| Description | EI-QIB collaboration in microbial genomics |
| Organisation | Quadram Institute Bioscience |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | There is a joint PDRA post in this area and now a joint PI group. EI is undertaking bioinformatics development and single cell and genomic analysis. We also provide HPC capability. |
| Collaborator Contribution | The team at QIB are undertaking the evolutionary experiments, providing samples and data. We work closely with the Webber and Kingsley groups in this area. |
| Impact | The collaboration involved microbiology and bioinformatics. |
| Start Year | 2015 |
| Description | ENQ-1027 |
| Organisation | University of East Anglia |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genomic data generation to underpin programs in genome adaptation. |
| Collaborator Contribution | Provision of materials |
| Impact | Chracterisation of the genomics of adaptation to climate in a stored product pest |
| Start Year | 2017 |
| Description | ENQ-1028 |
| Organisation | Cranfield University |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in improved crop production. |
| Collaborator Contribution | Provision of materials |
| Impact | Genomic resources to enable further research into improved crop production when water is limiting. |
| Start Year | 2016 |
| Description | ENQ-122 |
| Organisation | Rothamsted Research |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in renewable fuels and bioproducts. |
| Collaborator Contribution | Provision of materials |
| Impact | Genomic tools and resources to enable gene discovery for important target crop improvement traits for increased biomass yield. |
| Start Year | 2014 |
| Description | ENQ-130 |
| Organisation | University of York |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Transcriptome data generation to underpin programs in diet for disease prevention |
| Collaborator Contribution | Provision of materials |
| Impact | Further understanding of genome evolution in polyploid brassica species |
| Start Year | 2014 |
| Description | ENQ-134 |
| Organisation | John Innes Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Transcriptome data generation to underpin programs in sustainable agriculture |
| Collaborator Contribution | Provision of materials |
| Impact | Comparison of different Triticeae under different conditions to enable sustainable agriculture through breeding programmes |
| Start Year | 2014 |
| Description | ENQ-1417 |
| Organisation | University of Cambridge |
| Department | The Sainsbury Laboratory |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Transcriptome data generation to underpin programs in plant-pathogen interaction |
| Collaborator Contribution | Provision of materials |
| Impact | A better understanding of the plant pathogens Phytophthora infestans and Phytophthora mirabilis |
| Start Year | 2015 |
| Description | ENQ-1643 |
| Organisation | University of East Anglia |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in biodiversity and metabarcoding |
| Collaborator Contribution | Provision of materials |
| Impact | Metabarcoding data to further understanding of biodiversity environments |
| Start Year | 2017 |
| Description | ENQ-1706 |
| Organisation | University of Greenwich |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin African cassava whitefly research. |
| Collaborator Contribution | Provision of materials |
| Impact | Genome data to further study outbreak of African cassava whitefly |
| Start Year | 2017 |
| Description | ENQ-1907 |
| Organisation | University of East Anglia |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Transcriptome data generation to underpin research into cellular plasticity. |
| Collaborator Contribution | Provision of materials |
| Impact | Data to research cellular plasticity in the avian primitive streak. |
| Start Year | 2017 |
| Description | ENQ-1965 |
| Organisation | University of Warwick |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Transcriptome data generation to underpin research into structure and functioning of rhizosphere in communities of oilseed rape. |
| Collaborator Contribution | Provision of materials |
| Impact | Understanding of function of root associated microbiota and root responses to it. |
| Start Year | 2017 |
| Description | ENQ-1969 |
| Organisation | University of Huddersfield |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in archaeogenetic research |
| Collaborator Contribution | Provision of materials |
| Impact | Archaeogenetic information from mitochondrial genome sequence to track human movement. |
| Start Year | 2017 |
| Description | ENQ-2007 |
| Organisation | University of Dundee |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Transcriptome data generation to underpin programs in Arabidopsis gene response |
| Collaborator Contribution | Provision of materials |
| Impact | Transcriptome data of bredth of tissues and conditions for Arabidopsis to enable a reference transcript dataset to be generated. |
| Start Year | 2017 |
| Description | ENQ-2127 |
| Organisation | Quadram Institute Bioscience |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Transcriptome data generation to underpin programs in diet for disease prevention |
| Collaborator Contribution | Provision of materials |
| Impact | Better understanding of gene expression in response to special diet for prostate cancer patients |
| Start Year | 2017 |
| Description | ENQ-2127 |
| Organisation | Quadram Institute Bioscience |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Transcriptome data generation to underpin programs in diet for disease prevention |
| Collaborator Contribution | Provision of materials |
| Impact | Better understanding of gene expression in response to special diet for prostate cancer patients |
| Start Year | 2017 |
| Description | ENQ-2214 |
| Organisation | John Innes Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in sustainable agriculture |
| Collaborator Contribution | Provision of materials |
| Impact | A better understanding of the genetic mechanism responsible for variation in vernalization response in Brassica. |
| Start Year | 2017 |
| Description | ENQ-2214 |
| Organisation | John Innes Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in sustainable agriculture |
| Collaborator Contribution | Provision of materials |
| Impact | A better understanding of the genetic mechanism responsible for variation in vernalization response in Brassica. |
| Start Year | 2017 |
| Description | ENQ-2279 |
| Organisation | John Innes Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to generate genome reference sequences. |
| Collaborator Contribution | Provision of materials |
| Impact | Genomic resources to better understand and characterise plant leaf and flower growth. |
| Start Year | 2017 |
| Description | ENQ-2279 |
| Organisation | John Innes Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in plant flower and leaf growth |
| Collaborator Contribution | Provision of materials |
| Impact | Genomic resources to better understand and characterise plant leaf and flower growth. |
| Start Year | 2017 |
| Description | ENQ-2279 |
| Organisation | John Innes Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in plant flower and leaf growth |
| Collaborator Contribution | Provision of materials |
| Impact | Genomic resources to better understand and characterise plant leaf and flower growth. |
| Start Year | 2017 |
| Description | ENQ-2331 |
| Organisation | John Innes Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in sustainable agriculture |
| Collaborator Contribution | Provision of materials |
| Impact | Better understanding of variation in polyploid wheat |
| Start Year | 2017 |
| Description | ENQ-2331 |
| Organisation | John Innes Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in sustainable agriculture |
| Collaborator Contribution | Provision of materials |
| Impact | Better understanding of variation in polyploid wheat |
| Start Year | 2017 |
| Description | ENQ-2359 |
| Organisation | British American Tobacco |
| Country | United Kingdom |
| Sector | Private |
| PI Contribution | Transcriptome data generation to underpin programs in toxicant biochemistry in tobacco |
| Collaborator Contribution | Provision of materials |
| Impact | Understanding regions of genome where key mutations lie that effect toxicant levels and genes regulated by such mutations. |
| Start Year | 2017 |
| Description | ENQ-2379 |
| Organisation | University of Helsinki |
| Country | Finland |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in spatial interactions in ecological systems |
| Collaborator Contribution | Provision of materials |
| Impact | Classification using metabarcoding to further understand spatial interactions in ecological systems. |
| Start Year | 2017 |
| Description | ENQ-2530 |
| Organisation | Canterbury Christ Church University |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Transriptome data generation to underpin programs in plant genetics |
| Collaborator Contribution | Provision of materials |
| Impact | Understanding the epigenetics of alternative splicing in Arabidopsis |
| Start Year | 2017 |
| Description | ENQ-2656 |
| Organisation | University of Sussex |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in adaptation. |
| Collaborator Contribution | Provision of materials |
| Impact | Further understanding of adaptation in fish genomes. |
| Start Year | 2017 |
| Description | ENQ-2675 |
| Organisation | Institute Of Cardiometabolism And Nutrition |
| Country | France |
| Sector | Charity/Non Profit |
| PI Contribution | Genome data generation to underpin programs in human microbiome research. |
| Collaborator Contribution | Provision of materials |
| Impact | Further understanding of impact of nutrition on microbiome |
| Start Year | 2017 |
| Description | ENQ-432 |
| Organisation | Quadram Institute Bioscience |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to characterise the National Collection of Yeast Cultures |
| Collaborator Contribution | Provision of materials |
| Impact | Genome characterisation of yeast samples within the National Collection of Yeast Cultures. |
| Start Year | 2015 |
| Description | ENQ-718 |
| Organisation | John Innes Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in sustainable agriculture |
| Collaborator Contribution | Provision of materials |
| Impact | Better understanding of variation in polyploid wheat |
| Start Year | 2015 |
| Description | ENQ-771 |
| Organisation | James Hutton Institute |
| Country | United Kingdom |
| Sector | Charity/Non Profit |
| PI Contribution | Transcriptome data generation to further understanding of the regulation of (1,3;1,4)-beta-glucan synthesis in the grasses |
| Collaborator Contribution | Provision of materials |
| Impact | Better understanding of the regulation of (1,3;1,4)-beta-glucan synthesis in the grasses |
| Start Year | 2016 |
| Description | ENQ-799 |
| Organisation | University of East Anglia |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in antibiotic discovery |
| Collaborator Contribution | Provision of materials |
| Impact | Identification of novel natural product pathways to build towards antibiotic discovery research |
| Start Year | 2015 |
| Description | ENQ-999 |
| Organisation | University of East Anglia |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Genome data generation to underpin programs in health and nutrition |
| Collaborator Contribution | Provision of materials |
| Impact | A better understanding of the impact of age, gender, genotype and gut microflora on flavonoid absorption and metabolism |
| Start Year | 2016 |
| Description | Genome 10K Consortium |
| Organisation | University of California, Davis |
| Department | UC Davis Genome Cente |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | The G10K consortium is an international consortium of tissue curators, biologists, conservationists, genome scientists, computer scientists, outreach educators, and more. Federica Di Palma is a council member of the Consortium and has provided advice to the current ongoing projects. Organised meetings and contributed talks to several workshops and meetings. |
| Collaborator Contribution | The G10K leadership and community of scientists built an infrastructure from sample collection to genome sequencing, assembly, annotation, alignments, public data releases, and analyses for publications. |
| Impact | Collaboration is multidisciplinaryand includes tissue curators, biologists, conservationists, genome scientists, computer scientists, outreach educators, and more from different countries. Outputs include press releases, workshops, meetings, publications. |
| Start Year | 2011 |
| Title | Alvis |
| Description | Tool to produce a range of production quality alignment diagrams based on the output of common aligner tools. Will also spot chimeric contigs/reads. |
| Type Of Technology | Software |
| Year Produced | 2019 |
| Open Source License? | Yes |
| Impact | An earlier version was used to create diagrams for the RenSeq paper. The tool is currently being used for analysis of genome assembly quality within EI. A paper on the tool will be submitted during 2019. |
| Title | Legopore |
| Description | Software to control the Lego DNA sequencer model built for public engagement. |
| Type Of Technology | Software |
| Year Produced | 2018 |
| Open Source License? | Yes |
| Impact | Hundreds of members of the public, adults and children, have used the software at one of our engagement events. |
| Title | MISO: An open-source LIMS for NGS sequencing centres |
| Description | MISO (Managing Information for Sequencing Operations) is an open-source Lab Information Management System (LIMS) started at the Earlham Institute, specifically designed for tracking next-generation sequencing experiments. Sequencing centres differ not only in terms of their scale and output, but also their requirements for information management. Sequencing platforms are becoming more accessible, and the efficient storage of genomic metadata is vital for large and small sequencing centres alike. Off-the-shelf solutions are often very expensive and not cost-effective for the smaller centre. Furthermore, support contracts are often required, and the extensibility of these systems is not in the hands of the metadata generators. In terms of implementation, as well as the desire to tailor an information system in-house, data formats can change and platforms can evolve rapidly. These are valid concerns for both large centres characterised by high-throughout data production and smaller scale laboratories with constrained expenditure for IT solutions, and potentially project specific metadata requirements. Hence, we are developing MISO, an open-source LIMS for recording sequencing metadata. We are using freely available tools that are industry standard, well documented, and easy to set up on minimal hardware. As a bare system, MISO can store relevant metadata based on a wide array of NGS sequencing platforms (e.g. Illumina GA, HiSeq and MiSeq, Roche 454, ABI SOLiD and PacBio RS) and public repository data submission schemas (e.g. the Sequence Read Archive at the EBI), and has many features common to bespoke and proprietary LIMS, such as secure authentication, fine-grained access control, barcode tracking, and reporting. |
| Type Of Technology | Webtool/Application |
| Year Produced | 2018 |
| Open Source License? | Yes |
| Impact | A number of new MISO releases have been made available this year, the latest being 0.2.109. The project has seen over 140 releases in its 7 year existence, and the project is 100% open source, allowing sequencing centres to have the option of a completely free solution for managing their instruments and sample tracking. |
| URL | https://github.com/TGAC/miso-lims/releases/tag/v0.2.109 |
| Title | Mikado - Leveraging multiple transcriptome assembly methods for improved gene structure annotation |
| Description | Mikado is a lightweight Python3 pipeline to identify the most useful or "best" set of transcripts from multiple transcript assemblies. Our approach leverages transcript assemblies generated by multiple methods to define expressed loci, assign a representative transcript and return a set of gene models that selects against transcripts that are chimeric, fragmented or with short or disrupted CDS. |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | Mikado has been utilised to deliver improved gene annotation for Ash doi:10.1038/nature20786 and wheat doi: 10.1101/gr.217117.116 and was utilised by the international wheat genome sequencing consortium. |
| Title | NanoOK RT software tool |
| Description | A real-time analysis tool for metagenomic classification and identification of antimicrobial resistances form nanopore sequence data. |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | The software was developed for and initially used in our work with pre-term babies suffering from Necrotizing Enterocolitis. We are now working to apply it to a wide range of other application areas and have had discussions with a number of interested parties at national and international institutes. |
| Title | Portcullis - Efficient and accurate detection of splice junctions from RNAseq |
| Description | Portcullis stands for PORTable CULLing of Invalid Splice junctions from pre-aligned RNA-seq data. It is known that RNAseq mapping tools generate many invalid junction predictions, particularly in deep datasets with high coverage over splice sites. In order to address this, instead for creating a new RNAseq mapper, with a focus on SJ accuracy we created a tool that takes in a BAM file generated by an RNAseq mapper of the user's own choice (e.g. Tophat2, Gsnap, STAR2 or HISAT2) as input (i.e. it's portable). It then, analyses and quantifies all splice junctions in the file before, filtering (culling) those which are unlikely to be genuine. Portcullis output's junctions in a variety of formats making it suitable for downstream analysis (such as differential splicing analysis and gene modelling) without additional work. Portcullis can also filter the original BAM file removing alignments associated with bad junctions. Both the filtered junctions and BAM files are cleaner and more usable resources which can more effectively be used to assist in downstream analyses such as gene prediction and genome annotation. |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | Porcullis has been utilised to deliver improved gene annotation for Ash doi:10.1038/nature20786 and wheat doi: 10.1101/gr.217117.116 and was utilised by the international wheat genome sequencing consortium. |
| Description | Evolutionary History and Domestication of the Ferret (Mustela putorius furo). Genome Science 2016 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The domestic ferret (Mustela putorius furo) models biological processes that are highly relevant to human disease and health research such as influenza, cystic fibrosis and asthma. The recently completed draft of the ferret genome and associated annotation project (Peng et al 2014) allows us to extend research and examine the domestication of the ferret. Most domestic animals were domesticated ~10,000 years ago, but the history of the ferret's domestication is uncertain. It is likely that ferrets have been domesticated for at least 2,000 years, a similar time to the domestication of the rabbit, of which the ferret was domesticated to hunt. We have sequenced the genomes of a further eight domestic ferrets along with 12 European Polecats (M. putorius), 2 Steppe Polecats (M. eversmanii) and 4 Black-footed Ferrets (M. nigripes). In order to examine the genetics underpinning ferret domestication and compare the genomes of domestic and wild ancestor, we first need to identify the ancestral species of the domestic ferret, the identification of which is not fully resolved. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Our science strategy. |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Video and web page to promote EI's research, - SOCIAL MEDIA 62 Impressions 83,500 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/science-strategy |
| Description | 10 ways to ensure you write a good PhD thesis |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Article on - A look at the crux of your three or four years of study: the dreaded thesis and viva voce that will seal your doctorhood. SOCIAL MEDIA Engagement 290 Impressions 116,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/10-ways-ensure-you-write-good-phd-thesis |
| Description | 3D Printing in Genomics |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Insight into 3D printing in Genomics with Neil Pearson, SOCIAL MEDIA Engagements 188 Impressions 596,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://blog.tgac.ac.uk/3d-printing-in-genomics/ |
| Description | A new breakthrough on ash dieback |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | UK scientists have identified the country's first ash tree that shows tolerance to ash dieback, raising the possibility of using selective breeding to develop strains of trees that are tolerant to the disease. SOCIAL MEDIA Engagement 75 Impressions 98,100 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/newsroom/new-breakthrough-ash-dieback |
| Description | Ada Lovelace Day |
| Form Of Engagement Activity | A magazine, newsletter or online publication |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Professional Practitioners |
| Results and Impact | We put on lots of different activities to celebrate Ada Lovelace Day, including written pieces for the website, a cryptic crossword of women in science, as well as bake sales and more. The event was publicised across campus, even attracting members of the public to come to the research park on the day in question. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Ada Lovelace Day: inspirational and influential women in science |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Video of EI female researchers highlighting the influential women in science to celebrate Ada Lovelace day - SOCIAL MEDA Engagement 101 Impressions 90800 VIEWS YOUTUBE 1767 |
| Year(s) Of Engagement Activity | 2016 |
| URL | https://vimeo.com/186384622 |
| Description | Agriculture for Food Security (AgriFose) STAKEHOLDERS WORKSHOP ON TILAPIA AQUACULTURE IN TANZANIA |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Workshop to look at: Genetic improvement in aquaculture and its impact around the world by WorldFish; Aquaculture development in Africa: the case of Malawi by WorldFish (Malawi); Tilapia and its endemism in Africa: challenges and opportunities; Experiences of small scale fish farmers in Tanzania: case studies by TAFIRI; Aquaculture Policy in Tanzania by Director of Aquaculture Tanzania; Aquaculture research and technology transfer; Potential species/strains for breeding program in Tanzania; Aquaculture entrepreneur-researcher interaction in Tanzania: challenges and opportunities by SUA; The status of aquaculture breeding programs in Africa and lessons from Malaysia by UDSM; Tilapia aquaculture development strategy in Tanzania and possible collaborations (Remarks on way forward from TAFIRI, UDSM, SUA, Bangor, Earlham, SLU, WorldFish, Aquaculture Department -MALF) |
| Year(s) Of Engagement Activity | 2016 |
| Description | Aphids - the versatile agricultural nuisance |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | At EI, we research pests such as aphids, to better inform us of the versatile evolutionary strategies that help them ravage our crops, and how we can combat their game plan. I became fascinated with aphids when, after bringing a chive plant in from the cold, a ravenous horde descended upon our carnivorous sundew plant. SOCIAL MEDIA 118 Impressions 186135 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/aphids-versatile-agricultural-nuisance |
| Description | Aquaculture and tilapia: a fish that may tip the balance |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Overfishing has been rife for decades and our seas and oceans have become vastly depleted in fish reserves. Despite this, over 70% of the world's population lives on the coast, relying on fish as a major protein source. It is time to look inland, towards freshwater aquaculture. SOCIAL MEDIA Engagement 62 Impressions 91764 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/articles/aquaculture-and-tilapia-fish-may-tip-balance |
| Description | Article - -Anglo-Saxon-British human ancestry starts in East Anglia |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Where did we come from? Archaeologists and scientists look to the East of England for answers on the origins of our DNA. SOCIAL MEDIA 98 Impressions 70,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/anglo-saxon-british-human-ancestry-starts-east-anglia |
| Description | Article - A conservation success story: the European Polecat |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Article to highlight the research on EUropean polecat - Unseen in areas for more than a hundred years, the European Polecat (Mustela putorius) has recolonised over extensive parts of the UK. Recently hitting the news headlines, the native British species of the mustelid family is back. SOCIAL MEDIA Engagement 54 Impressions 57,200 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/conservation-success-story-european-polecat |
| Description | Article - Biohacking and the Power of Youth - WIRED2015 |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | In November 2015, TGAC teamed up with Thought for Food in order to put on a workshop for WIRED2015: Next Generation on the subject of biohacking, and how we might use it to feed nine billion mouths by 2050. Over two workshops, attended by young people aged 12-18 (along with some parents), participants were given an introduction to the potential of modern genome sequencing and how we can use the wealth of information gleaned from it in order to better understand, and improve our food. The attendees were enthused and inspired about the topic of food security and how modern techniques mean that DNA sequencing can be performed cheaper and faster than ever before. SOCIAL MEDIA Engagement 169 Impressions 86600 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/biohacking-and-power-youth-%E2%80%93-wired2015 |
| Description | Article - First brassica data training at EI |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | We hold the first training session on making the most of the Brassica Information Portal (BIP) developed by the Jurkowski Group and collaborators. SOCIAL MEDIA Engagement 80 Impressions 111,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/first-brassica-data-training-ei |
| Description | Article - Impact story - Keeping living things healthy |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Article to promote our broad research interests - Our diverse projects covering the breadth of life on earth are helping us to improve human, animal and plant health, while aiding in researching healthier living systems. SOCIAL MEDIA Engagement 13 Impressions 21,600 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/impact-story-keeping-living-things-healthy |
| Description | Article - Precision engineering: Genomics |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Web article - At EI, we recently heard from Dr Anthony West - automation specialist in our Platforms & Pipelines group - who filled us in on the power and technical difficulties of a new approach to biotechnology: Synthetic Biology. SOCIAL MEDIA - Engagement 75 Impressions 84,400 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/precision-engineering-genomics |
| Description | Article - Precision genome annotation: Portcullis and Mikado |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Article - Two such tools developed at Earlham Institute in the Swarbreck Group have paved the way to drastically enhance how we can do this: Portcullis, developed by Daniel Mapleson, and Mikado, developed by Luca Venturini, have recently been released to the public, and are available for any scientist who wants to accurately identify important regions within genomes. SOCIAL MEDIA Engagement 95 Impressions 100,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/precision-genome-annotation-portcullis-and-mikado |
| Description | Article - Stronger together: building scientific communities |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Aiming to reach new heights with its bioinformatics tools for signalling networks and large-scale integrated analysis, SignaLink and NavigOmix, the Korcsmaros Group has a new addition. Aidan Budd tells us how he got into building successful scientific communities and his new role at EI - with caffeine proven as a key contributor! SOCIAL MEDIA Engagement 135 Impressions 140,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/stronger-together-building-scientific-communities |
| Description | Article - The Circus of life: a tale of two Harriers |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Highlighting the research and studies of the Hen Harriers - We speak to our conservation genomics expert Dr Graham Etherington on how the Hen Harrier is actually two species rather than one - correct classification will help save these endangered birds of prey.. SOCIAL MEDIA Engagement 29 Impressions 46,800 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/circus-life-tale-two-harriers |
| Description | Article/Video - Ada Lovelace Day: inspirational and influential women in science |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | To celebrate Ada Lovelace Day, we asked staff on Norwich Research Park to tell us of their inspirational role models in STEM, and how they inspired them to pursue a science career. A video and written article was produced. SOCIAL MEDIA Engagement 101 Impressions 90,800. |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/ada-lovelace-day-inspirational-and-influential-women-science |
| Description | Autophagy - A review of techniques |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | The third edition of "Guidelines for the use and interpretation of assays for monitoring autophagy" was recently published in the leading journal Autophagy, featuring the Earlham Institute's (EI) Autophagy Regulatory Network resource and co-authored by Dr Tamas Korcsmaros, Computational Biology Fellow at EI and Institute of Food Research (IFR). |
| Year(s) Of Engagement Activity | 2012,2016 |
| URL | http://www.earlham.ac.uk/newsroom/autophagy-review-techniques |
| Description | BRIDGE workshop, Bogota, March 2017 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Over 40 delegates from Colombia and the UK attended the EI led workshop. Attendees discussed ideas and plans for research involving the management, conservation, and use of Colombian natural resources. The workshop led to the development of the BRIDGE Colombia network of researchers and raised the international profile of EI, particularly in Latin America. |
| Year(s) Of Engagement Activity | 2017 |
| Description | BROADCAST: Aphids - the versatile agricultural nuisance |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC Radio 4, Farming Today |
| Year(s) Of Engagement Activity | 2017 |
| Description | BROADCAST: Addressing the Big Data skills gap - the Centre for Advanced Knowledge Engineering in Downham Market |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | YouTube - HPC |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Ash dieback: Insect threat to fungus-resistant trees |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC Radio Shropshire, Eric Smith and Clare Ashford |
| Year(s) Of Engagement Activity | 2017 |
| Description | BROADCAST: Ash dieback: Insect threat to fungus-resistant trees |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Ash dieback: Insect threat to fungus-resistant trees |
| Year(s) Of Engagement Activity | 2017 |
| Description | BROADCAST: Ash trees have "fighting chance" against deadly disease |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | ITV Anglia |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: At TGAC, PacBio's Long Reads Are Key for Complex Genomics Studies |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Daily Motion - PacBio |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: Big data on the farm |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC Radio 4 - Ji Zhou |
| Year(s) Of Engagement Activity | 2017 |
| Description | BROADCAST: Brexit statement: Director of Earlham Institute (EI) |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Mustard TV - Post-Brexit opinion |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Brexit statement: Director of Earlham Institute (EI) |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC Radio Norfolk - Post-Brexit opinion |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Disease tolerant genes renew hope for UK ash trees |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC Radio 4 |
| Year(s) Of Engagement Activity | 2017 |
| Description | BROADCAST: Double fish production while preserving biodiversity? Can it be done? |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC WS, World Update |
| Year(s) Of Engagement Activity | 2017 |
| Description | BROADCAST: Drone training - Aerial Academy |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Lincolnshire FM, Farming Programme |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: EU and devolution |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC Radio Norfolk, Nick Conrad. |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Earlham Institute | Bringing Science to Life |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Earlham Institute | Bringing Science to Life - Vimeo |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Expert comment on consequences of Brexit for UK science research communities |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Talk Radio |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Federica Di Palma, Genome 10K |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC Look East |
| Year(s) Of Engagement Activity | 2017 |
| Description | BROADCAST: GM crops ban in Scotland 'could have apocalyptic consequences' |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC2 Scotland - GM Crops |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: Genomics-driven surveillance to track crop diseases |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | ITV News Anglia - New genomics-driven surveillance to track crop diseases |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: Immunity gene fusions uncovered in plants |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | ITV News Anglia, 18:10, ITV1 Anglia East (Ipswich/Norwich) |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Immunity gene fusions uncovered in plants |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Good Morning Britain, 7:08 |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Immunity gene fusions uncovered in plants |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Good Morning Britain, 6:08 |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Immunity gene fusions uncovered in plants |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | ITV Lunchtime News, 13:57, ITV1 Anglia East (Ipswich/Norwich) |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Immunity gene fusions uncovered in plants |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Good Morning Britain, 8:08 |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Insect Tapas |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | Future Radio - Outreach |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: Mini DNA sequencer tests true |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC 1, Look East (Ipswich/Norwich) - MinION |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: NCC Employability: Apprenticeships |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Norfolk County Council - YouTube - Outreach |
| Year(s) Of Engagement Activity | 2014 |
| Description | BROADCAST: NCC Employability: How to create a CV |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Norfolk County Council - YouTube - outreach |
| Year(s) Of Engagement Activity | 2014 |
| Description | BROADCAST: NCC Employability: Science |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Norfolk County Council - YouTube - Outreach |
| Year(s) Of Engagement Activity | 2014 |
| Description | BROADCAST: Norwich strengthens reputation as 'world leader' in science |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Mustard TV |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Peculiar complexity of wheat |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | Future Radio - Wheat |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: REAP conference |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Industry/Business |
| Results and Impact | Cambridge TV - Reap, Ji Zhou. |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: Scientists aim to stop yellow rust |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Heart Norwich, Noel Vine |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Spotted gar genome links humans to vertebrate ancestry |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Matthew Gudgin, 17:50, BBC Radio Norfolk |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Study Highlights New Threat to Bees Worldwide |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC Radio Norfolk, Matthew Gudgin |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: Study Highlights New Threat to Bees Worldwide |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Study Highlights New Threat to Bees Worldwide |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: TGAC Understanding Life on Earth |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Lab Tube.tv - Intel HPC project |
| Year(s) Of Engagement Activity | 2014 |
| Description | BROADCAST: TGAC releases new genetic data to combat ash dieback epidemic |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC 1 East (Ipswich/Norwich) |
| Year(s) Of Engagement Activity | 2014 |
| Description | BROADCAST: TGAC releases new genetic data to combat ash dieback epidemic |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | TGAC releases new genetic data to combat ash dieback epidemic - ITV East Anglia |
| Year(s) Of Engagement Activity | 2014 |
| Description | BROADCAST: TGAC releases new genetic data to combat ash dieback epidemic |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | TGAC releases new genetic data to combat ash dieback epidemic - BBC 1 East (Beds & Luton) |
| Year(s) Of Engagement Activity | 2014 |
| Description | BROADCAST: TGAC: Understanding Life on Earth |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Connected social media - Intel HPC project |
| Year(s) Of Engagement Activity | 2014 |
| Description | BROADCAST: The DNA decoder: How Europe's 'biggest supercomputer' helps Norwich scientists with world-leading research |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Mustard TV |
| Year(s) Of Engagement Activity | 2016 |
| Description | BROADCAST: The Genome Analysis Centre announces an important milestone in wheat research |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | 06:34, BBC Radio Norfolk - Wheat |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: The Genome Analysis Centre announces an important milestone in wheat research |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | BBC 1, Look East (Ipswich/Norwich) - Wheat |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: The Genome Analysis Centre announces an important milestone in wheat research |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | 08:04, BBC Radio Norfolk - Wheat |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: The Genome Analysis Centre announces an important milestone in wheat research |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | 07:04, BBC Radio Norfolk - Wheat |
| Year(s) Of Engagement Activity | 2015 |
| Description | BROADCAST: The World - The year of CRISPR: scientists celebrate new genome tool |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | ABC News (Australia) |
| Year(s) Of Engagement Activity | 2017 |
| Description | Big Bang Fair |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | We trialled a game developed for public engagement, "TGAC4kids," prior to releasing a beta test version to take on our roadshow to schools. |
| Year(s) Of Engagement Activity | 2014 |
| Description | Big Data in Agri-tech Special Interest Group |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Industry/Business |
| Results and Impact | An Agri-tech East Special Interest Group on the topic of big data, and the basic advantages and challenges of adopting and using the data effectively. Networking opportunity for the KEC team to understand issues relevant to farmers, seed companies and other Agri-tech stakeholders. Gained contacts and created a link with Agri-tech East which has resulted in co-facilitated events. |
| Year(s) Of Engagement Activity | 2015 |
| URL | https://www.agritech-east.co.uk/category/using-big-data-in-agriculture/ |
| Description | Biohacking and the Power of Youth - WIRED2015 |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | In November 2015, TGAC teamed up with Thought for Food in order to put on a workshop for WIRED2015: Next Generation on the subject of biohacking, and how we might use it to feed nine billion mouths by 2050. Over two workshops, attended by young people aged 12-18 (along with some parents), participants were given an introduction to the potential of modern genome sequencing and how we can use the wealth of information gleaned from it in order to better understand, and improve our food. The attendees were enthused and inspired about the topic of food security and how modern techniques mean that DNA sequencing can be performed cheaper and faster than ever before. SOCIAL MEDIA Engagement 169 Impressions 86,600 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/biohacking-and-power-youth-%E2%80%93-wired2015 |
| Description | Brilliant brassica |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Article to highlight - With our recent release of the Brassica Information Portal (BIP) - a vital, open-source tool for crop breeders and researchers worldwide - why are brassicas so brilliant, and why is the availability of BIP so important to science, agriculture, industry and us? SOCIAL MEDIA Engagement 138 Impressions 183,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/brilliant-brassica |
| Description | Can we produce a better wheat crop to feed the world? Single to multiple wheat genomics |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Entering a 'wheat pan-genomics' era from single to multiple wheat DNA references, the Earlham Institute (EI) aims to diversify one of the world's most complex genomes to improve yield quality and increase wider production of this critical food crop. SOCIAL MEDIA Engagement 238 Impressions 137768 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/newsroom/can-we-produce-better-wheat-crop-feed-world-single-multiple-wheat-... |
| Description | Cataloging genetic diversity in the Black-footed Ferret Black-footed Ferret Genetics Symposium, Fort Collins, Colorado, USA. 19-20 Jan 15. |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Presentation of EI's work on Black-footed Ferret. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Cheap and robust genomes using the PDABS pipeline Advances in Genome Biology and Technology |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Advances in next-generation sequencing (NGS) technologies and the subsequent reduction in cost have enabled the research community to sequence the genomes of many non-model organisms. Genome assemblies using next generation technologies such as Illumina show high quality nucleotide level information, but are fragmented due to the inability to retain contiguity. The absence of low-cost methods for creating high quality genome sequences from a wide range of organisms currently hampers the generation of de novo genomes for comparative genomic studies, and new methodologies and data types need to be tested to achieve this goal. We have integrated NGS with nano-channel genome mapping and developed the PCR-free Discovar Assembly BioNano Scaffolding (PDABS) pipeline to assemble cheap, contiguous and robust genomes. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Children of TGAC |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | A chance for staff to show their children the research that we do, as a preamble to our "TGAC4kids" roadshow to schools. We managed to trial a lot of different activities and games before running our outreach programme throughout Norwich. |
| Year(s) Of Engagement Activity | 2014 |
| Description | Code for crops: Training Vietnamese Rice Breeders at EI |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | ROund up of visit to EI by researchers working on rice in Vietnam. At EI, six breeders from Hanoi learned the basics of bioinformatics, which will help them breed drought and salt resistant rice in Vietnam. Here's their story. After the success of our first trip to Vietnam to introduce 'big data' analysis to the rice breeders of the Agricultural Genetics Institute (AGI), three months on we have been delighted to host six of our collaborators and friends from Hanoi in order to teach them how to code and apply bioinformatics to their work on rice breeding (and give them a taster of an English pub lunch). SOCIAL MEDIA Engagement 56 Impressions 57,700 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://earlham.ac.uk/code-crops-training-vietnamese-rice-breeders-ei |
| Description | College visits to EI |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | Over the course of the summer we hosted various colleges in order to give students an insight into what goes on in a bioinfomatics and next generation sequencing pipeline, and how this relates to applied science. Many of the students had agricultural backgrounds, therefore this fostered a good discussion on how our research is applicable beyond the research park. We also did a "Three Horizons" based activity, during which we outlined routes to a better understanding of problems and how to solve them. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Conference Oral Presentation - Biology of Genomes, CSHL, USA |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Postgraduate students |
| Results and Impact | Oral presentation at the esteemed Biology of Genomes conference on Evolution of tissue-specific regulatory programs in cichlids; several questions and discussion was sparked after the presentation. Dissemination of research results enabled for wider discussion of reearch impact, future direction/studies and collaboration. |
| Year(s) Of Engagement Activity | 2017 |
| Description | Conference Oral Presentation - SMBE, Australia |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Postgraduate students |
| Results and Impact | Oral presentation at the esteemed SMBE conference on Evolution of tissue-specific regulatory programs in cichlids; several questions and discussion was sparked after the presentation. Dissemination of research results enabled for wider discussion of reearch impact, future direction/studies and collaboration. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Conference Poster - Biology of Genomes, CSHL, USA |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Postgraduate students |
| Results and Impact | Poster on Evolution of tissue-specific regulatory programs in cichlids - dissemination of reasearch results enabled for wider discussion of reearch impact, future direction/studies and collaboration. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Conference Poster - Cichlid Science |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Postgraduate students |
| Results and Impact | Conference poster on Evolution of tissue-specific regulatory programs in cichlids - conference attendees solely worked on the cichlid model systems and as such, we forged further collaborative research activities based on our integrative scientific approaches. |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://web.natur.cuni.cz/zoologie/CichlidScience2017/ |
| Description | Conference Poster - Genome 10K and Genome Science |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Postgraduate students |
| Results and Impact | Conference poster on Evolution of tissue-specific regulatory programs in cichlids - this research will soon lead to a publication and as such, we had a wide interest from relevant publishers |
| Year(s) Of Engagement Activity | 2017 |
| Description | Conference Poster - Genome Science |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Postgraduate students |
| Results and Impact | Poster on Evolution of tissue-specific regulatory programs in cichlids - dissemination of reasearch results enabled for wider discussion of reearch impact, future studies and collaboration. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Conference Poster Presentation: Discovery and visualisation of homologous genes and gene families using Galaxy |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The poster presented at the International Plant and Animal Genomes Conference (San Diego, USA) conference was selected on abstract submission. The poster was presented in front of industry participants, donors, university professors and lecturers, postdoctoral researchers, graduates and undergraduates students. The poster presentation helped raising the international profile of Anil Thanki, Nicola Soranzo, Wilfried Haerty, Robert Davey and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2017 |
| Description | Conference talk: Data analysis tools - NanoOK |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Presentation of NanoOK tool at international nanopore conference, London Calling 2017. |
| Year(s) Of Engagement Activity | 2017 |
| Description | Conference talk: Real-time microbial disease diagnostics with MinION and NanoOK |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Presentation of research at international nanopore conference, London Calling 2017. |
| Year(s) Of Engagement Activity | 2017 |
| Description | Conference talk: Tackling microbial diseases using MinION diagnostics and NanoOK |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited plenary speaker at the Bern Nanopore Technology Day. |
| Year(s) Of Engagement Activity | 2017 |
| Description | Critical genes unravelled to understand human diseases and support drug discovery |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Lead author Tamas Korcsmaros, Fellow at EI and the Institute of Food Research, said: "Our cells must be able to detect and respond to many different pieces of genetic information coming from both internal and external sources. However, not all proteins in the cell are equally important. SOCIAL MEDIA Engagements 121 Impressions 112,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/new-study-unravels-critical-genes-understand-human-diseases-and-support-dru... |
| Description | DNA Foundry propels Earlham Institute into precision genomics |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | The Earlham Institute (EI) builds upon their National Capability in Genomics by adding a state-of-the-art DNA Foundry for Synthetic Biology to their world-leading advanced suite of sequencing technologies. SOCIAL MEDIA Engagement 115 Impressions 77,900 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/dna-foundry-propels-earlham-institute-precision-genomics |
| Description | Darwin Tree of Life Project (UK) |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Press release detailing the institutes involvement (partner) in the project which will create a new foundation for biology to drive solutions for preserving biodiversity and sustaining human societies. The institute is likely to be involved in the sampling and sequencing of protists (single-celled eukaryotes - organisms with a nucleus) and the analysis of vertebrate genomes. |
| Year(s) Of Engagement Activity | 2018 |
| Description | Data, Data, Data Everywhere (Pint of Science talk, Norwich) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Dr Davey delivered a talk as part of the Norwich 2017 Pint of Science series about the challenges and solutions for modern data management in the life sciences, including recent data developments, high-performance computing, and software tools. |
| Year(s) Of Engagement Activity | 2017 |
| URL | https://pintofscience.co.uk/event/crops-crystals-and-computers-technology-for-food-security |
| Description | Decoding Life on Earth - The Earth BioGenome Project (EBP) |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Press release detailing the institutes involvement (partner) in the project which is a global effort to sequence the genetic code of all 1.5 million known animal, plant, protozoan and fungal species on Earth. The project will create a new foundation for biology to drive solutions for preserving biodiversity and sustaining human societies. The aim is to sequence, catalogue and categorise the genomes of all of Earth's eukaryotic biodiversity over a period of ten years. |
| Year(s) Of Engagement Activity | 2018 |
| Description | Discover Earlham Institute at New Scientist Live 2016 |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Web page to promote our presence at the New Scientist Live event - SOCIAL MEDIA Engagement 209 Impressions 196,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/discover-earlham-institute-new-scientist-live-2016 |
| Description | Disease tolerant genes renew hope for UK ash trees |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Researchers have identified genetic markers for disease tolerance that suggest UK ash trees may have a fighting chance against a fungal infection that has the potential to wipe out 90% of the European ash tree population. SOCIAL MEDIA Engagement 100 Impressions 114334 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/newsroom/disease-tolerant-genes-renew-hope-uk-ash-trees |
| Description | Double fish production while preserving biodiversity - can it be done? |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | New resolution to establish National Aquaculture Development Centre (NADC) in Tanzania could help tackle poverty and undernutrition. SOCIAL MEDIA Engagement 94 Impressions 183476 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/newsroom/double-fish-production-while-preserving-biodiversity-%E2%80%93-can... |
| Description | EI embraces green-HPC for collaborative genome analysis at Icelandic data centre Verne Global |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Press release to promote new HPC at EI - The Earlham Institute (EI) has announced its new partnership with Verne Global, a global-based developer at the forefront of data centre infrastructure design. SOCIAL MEDIA Engagement 47 Impressions 30,700 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://earlham.ac.uk/ei-embraces-green-hpc-collaborative-genome-analysis-icelandic-data-centre-verne... |
| Description | EI installs largest SGI UV 300 supercomputer for life sciences worldwide |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | The Earlham Institute (EI) partners with Global HPC hardware giant SGI to address the most complex problems in genomics analysis. SOCIAL MEDIA Engagement 156 Impressions 223,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/newsroom/ei-installs-largest-sgi-uv-300-supercomputer-life-sciences-worldwi... |
| Description | Earlham Institute - Decoding Living Systems for a better world |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | The Genome Analysis Centre (TGAC) will be changing its name to the "Earlham Institute" on 27 June 2016.SOCIAL MEDIA Engagement 251 Impressions 175000 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/newsroom/earlham-institute-%E2%80%93-decoding-living-systems-better-world |
| Description | Earlham Institute launches first CyVerse-UK hub for 'big data' analysis |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Press release - We establish the first UK dedicated high-performance computing (HPC) cluster for international data portal 'CyVerse' - providing free, open-source genome analysis for big data research. SOCIAL MEDIA Engagement 360 Impressions 325,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/newsroom/earlham-institute-launches-first-cyverse-uk-hub-%E2%80%98big-data%... |
| Description | Earlham Institute receives Athena SWAN Bronze Award for gender equality |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Press release to promote EI being awarded bronze Athena Swan - Established in 2005, Athena SWAN recognises and encourages the careers of women in science, technology, mathematics and medicine (STEMM) employment in higher education and research. The Earlham Institute's (EI) first submission to the prestigious Athena SWAN Charter, owned and managed by the Equality Challenge Unit, has received the Bronze Award. SOCIAL MEDIA 184 Impressions 88,800 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/earlham-institute-awarded-athena-swan-bronze-award-gender-equality |
| Description | Earlham Institute receives supercomputing award for wheat research |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | The Earlham Institute (EI) has been recognised in the annual HPCwire Readers' and Editors' Choice Awards for their high-performance computing bread wheat genome project, presented at the leading supercomputing event SC16 in Salt Lake City, Utah. |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/earlham-institute-receives-2016-hpcwire-readers-and-editors-choice-award |
| Description | Embracing innovation through technology. |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Article to highlight EI's research impact - With our cutting-edge technological capacity encompassing genome sequencing and analysis, the work we do is underpinned by open data, open publication and open-source software, which keeps us at the forefront of genomics research. SOCIAL MEDIA 39 Impressions 52,600 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/impact-story-embracing-innovation-through-technology |
| Description | European Research Council awards €1.5M to arm cereals against pathogens and diseases |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Dr Ksenia Krasileva, Group Leader at the Earlham Institute (EI) and The Sainsbury Laboratory (TSL) has been awarded a €1.5M European Research Council Starting Grant to investigate the immune system of our most important crops. SOCIAL MEDIA Engagement 70 Impressions 24,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://earlham.ac.uk/european-research-council-awards-%E2%82%AC15m-arm-cereals-against-pathogens-and... |
| Description | Event - web article Discover Earlham Institute at New Scientist Live 2016 |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | New Scientist Live is a festival of ideas and discovery, taking place at ExCeL London. Rooted in the biggest, best and most provocative science, New Scientist Live will touch on all areas of human life. The show will feature four immersive zones covering Brain & Body, Technology, Earth and Cosmos. For four days this September, New Scientist Live will be like no other place on earth. Earlham Institute will be present in the technology section, showcasing what goes on behind the scenes in delivering the latest advances in bioscience - from massive supercomputing power to next-generation genome sequencing hardware. SOCIAL MEDIA Engagement 196,000 Impressions 209 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/discover-earlham-institute-new-scientist-live-2016 |
| Description | Everyone needs a bigger network |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Postgraduate students |
| Results and Impact | A training / workshop on efficient networking for scientists of all levels (from PhD students to post-docs and project leaders) from across the Norwich Research Park. The workshop included a "theory" part that concentrated on why and how to network; an experience sharing part where a few speakers talked about their experiences of engaging in networking / building relationships and how this has benefited them followed by interactive networking session between the participants, speakers and hosts. Attended by 26 delegates, 100% of delegates rated the course as very good or excellent. The session included: ? Value of engaging with industry and wider public - Katia Brumpton (TGAC) ? Efficient networking - strategy, preparation, etiquette, follow up - Lucy Marks (Norfolk Network) ? Experience Sharing / Invited Speakers - showcasing of success (or horror) stories from networking and engagement with industry -(invited speakers) ? Q&A session - ? Interactive Session - building networking skills and feedback - delivered by Lucy Marks (NN), Stuart Catchpole (TGAC), Katia Brumpton (TGAC) and with invited speakers ? informal session (communications games and further networking) |
| Year(s) Of Engagement Activity | 2016 |
| Description | Extreme environments: genome sequencing & space |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | EI website article on our fieldwork in Iceland |
| Year(s) Of Engagement Activity | 2018 |
| URL | http://www.earlham.ac.uk/articles/extreme-environments-genome-sequencing-space |
| Description | Fascination of plants day |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | A national day to celebrate plants, we helped to run an event along with JIC to encourage young people into learning more about plants. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Feature article on genomics in the Easton Daily Press |
| Form Of Engagement Activity | A magazine, newsletter or online publication |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | The Article was to cover the research activity at the Earlham Institute and at the Norwich Research park and how it would impact the general public |
| Year(s) Of Engagement Activity | 2019 |
| Description | Fighting the pathogen threat (British Science week - Neil Hall) |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Fighting the pathogen threat (British Science week - Neil Hall) SOCIAL MEDIA Engagement 34 Impressions 48300 VIEWS 1470 |
| Year(s) Of Engagement Activity | 2017 |
| URL | https://www.youtube.com/watch?v=xie9KIKG4XU |
| Description | Finding new cancer drugs in the neighbourhood |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Press release - Computational biologists have looked at the complex networks of interacting proteins that drive cancer formation, and found that targeting the neighbours of cancer-causing proteins may be just as effective as focusing on the cancer proteins themselves. SOCIAL MEDIA Engagement 93 Impressions 95170 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/newsroom/finding-new-cancer-drugs-neighbourhood |
| Description | Five reasons why computing isn't as scary as you think |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Article to promoteThinking of learning a second language? Coding might be your best bet. The world of computing, rather than being dull and overly-complicated, is like learning how to compose a beautiful symphony but instead of writing notes, you write code.SOCIAL MEDIA Engagement 212 Impressions 105,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/five-reasons-why-computing-isn%E2%80%99t-scary-you-think |
| Description | Forming a second line of plant defence - capturing disease-resistant DNA |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Scientists have developed a new improved method for capturing longer DNA fragments, doubling the size up to 7000 DNA bases that can be analysed for novel genes which provide plants with immunity to disease. SOCIAL MEDIA Engagement 140 Impressions 90,400 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/forming-second-line-plant-defence-capturing-disease-resistant-dna |
| Description | Friends of John Innes (FoJIC) Presentation |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Several of our scientists gave an in depth insight into how big data and genomics can be integrated with biological sciences in order to answer a swathe of important questions in the life sciences. |
| Year(s) Of Engagement Activity | 2014 |
| Description | From funding to the future |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | The Institute Development Scheme (IDS), set up in late 2015, aimed to support research at EI in several ways: through promoting creative, innovative and novel research, fostering the development of interdisciplinary teams and increasing collaboration both among academics and with industry. We report here on several important projects, which highlight the range of applications of our next-generation sequencing and bioinformatics capabilities. SOCIAL MEDIA Engagement 95 Impressions 79291 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/articles/funding-future |
| Description | Genetic Diversity of the Mustelidae: Implications for understanding Evolution, Domestication and Conservation. Genome 10K |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The ferret (Mustela putorius furo) models biological processes that are highly relevant to human disease and health research such as influenza, cystic fibrosis (CF) and asthma. Since CF is a multi-organ disorder, research using CF ferrets span a range of organs, thus the impact of research in this model is broad and allows for the analysis of early stages of the diseases. The recently completed draft of the ferret genome has allowed us to look more closely into ferret domestication and examine the underpinning processes of domestication from the ancestral European Polecat (M. putorius). We have sequenced eight domestic ferrets genomes and will sequence samples from European Polecat. Beneficial genetic variants increase in frequency due to positive selection together with linked neutral variants resulting in genomic islands of reduced heterozygosity between populations. By examining fixation indexes and heterozygosity between wild and domestic ferrets we can find genomic regions that have undergone selective sweeps. Using whole genome sequencing also allows us to leverage the ferret genome sequence to look into the genetic diversity and evolution of other species of wild Mustelidae. The current population of the endangered Black-footed Ferret (M. nigripes) from North America stems from only seven individuals. Using whole genome sequencing of Black-footed Ferrets from both before and after the population crash we will identify genetic diversity not present in the current population with a view to reintroducing it via genome editing technology. About two million years ago, the ancestral species of modern day Steppe Polecats (M. eversmanni) from Asia entered North America via the Bering Land Bridge and speciated into what is now Black-footed Ferret. Using a reference-free unbiased kmer approach, we will examine how closely-related Steppe Polecat is to both Black-footed Ferret and its sister species the European Polecat. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Genome 10K - vertebrate 'genomic zoo' to help protect our planet |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Press release to promote the Genome 10K conference to be held at EI 2017.The Genome 10K initiative, led by the University of California, Santa Cruz Genomics Institute, aims to understand how complex animal life evolved through changes in DNA and use this knowledge to become better stewards of the planet. SOCIAL MEDIA Engagement 169 Impressions 171,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/newsroom/genome-10k-vertebrate-%E2%80%98genomic-zoo%E2%80%99-help-protect-o... |
| Description | Genome sequence of a polar alga explains adaptation to extreme climates |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | An international team of researchers has identified the genetic mutations which allowed microalgae (phytoplankton) from the Southern Ocean to adapt to extreme and highly variable climates - a step towards understanding how polar organisms are impacted by climate change. SOCIAL MEDIA Engagement 95 Impressions 122000 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/genome-sequence-polar-alga-explains-adaptation-extreme-climates |
| Description | Genomic characterisation of wild tilapia populations |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The presentation took place as part of a workshop organised in Bogota (Colombia) between UK and Colombia scientific Institutions. The audience was composed of UK and Colombia university lecturers, Colombian industry partners. The presentation helped raising the international profile of Wilfried Haerty, Federica Di Palma and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2017 |
| Description | Genomics Workshop to Position Genome Campus as a case study of excellence in the East of England Life Sciences Audit |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | I was invited to participate in the workshop to position the Genome Campus, Cambridge, as a case study of excellence in the East of England Life Sciences Audit. Outputs included to describe how the campus drives collaboration and innovation in this area; highlight existing projects, opportunities, things we need to keep being world-class, what are strengths and weaknesses, how Govt can help. |
| Year(s) Of Engagement Activity | 2017 |
| Description | Germinal project workshop |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Industry/Business |
| Results and Impact | Germinal is part of a project in the UK called 'New Zoo' linking zoos to universities. The project between Banham Zoo and the UEA will be a Science Discovery Centre for Education themed around 'environmental responsibility' and a Knowledge Exchange HUB for Research located at Banham Zoo.The aim of the project is to build on existing work with Banham Zoo to establish a strategic relationship that will enable UEA science to be developed in collaboration with the zoo, and to use the zoo to promote the research of UEA and the wider Norwich Research Park to the 250,000 people who visit the attraction each year. It will also promote regional economic growth as it has the potential to increase visitor numbers to Banham Zoo and the wider region. The focus of the workshop was around how Banham could showcase research to the public within the envisaged facility. They also ran an innovative think-tank to consider interactivity with the science across the NRP. |
| Year(s) Of Engagement Activity | 2014 |
| Description | Give your time to inspire a young person |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | Our staff gave specific career talks to young people and answered their questions, showing how diverse careers in the sciences can be; not just working in a lab, but in purchasing, comms and more. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Global food security |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Article to promote our work on global food security - Our wide-ranging research into animal, plant and microbial genomics helps us improve breeding, withstand disease and enhance yields for future generations. SOCIAL MEDIA Engagement 74 Impressions 51,800 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/impact-story-global-food-security |
| Description | Grassroots Infrastructure and the Wheat Information System (RDA Interest Group on Agricultural Data (IGAD), Barcelona) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Dr Davey delivered a talk about the Grassroots software infrastructure for the dissemination of wheat data through federation and integration of storage and compute e-infrastructure. |
| Year(s) Of Engagement Activity | 2017 |
| URL | https://www.rd-alliance.org/rda-interest-group-agricultural-data-igad-pre-plenary-meeting-3-4-april-... |
| Description | Great Auk meeting at the International Centre for Life, Newcastle, UK |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Purpose of the meeting: To discuss what steps are necessary to prepare for possible future revival of great auks including: 1. The preparation of a suitably high quality great auk genome sequence, 2. The necessity for an annotated sequence/structural information, 3. Comparisons with razorbill genome, 4. Genome editing techniques, 5. Germ cell transfer techniques, 6. (Much later) great auk release into the wild, 7. Ethical and ecological considerations. Proposed structure of the project: In order to maintain this project's independence, and because it is probably too speculative and risky for public funding, it is the intention that the project will be carried forward initially with private funding. If, following the June meeting, we decide to go ahead, then a charitable foundation may be established to run the project. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Host Year in Industry Project |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Undergraduate students |
| Results and Impact | Tarang hosted a Year in Industry student who selected his project on the 'Genetic basis of adaptation to extreme environments: insights from the genome of soda tilapia (Alcolapia grahami)'. This project offered a great opportunity for an undergraduate student, Nicole Forrester, to learn about cutting edge wet- and dry- lab techniques associated with the study of an important model system for evolution, genetic diversity and aquaculture practices. Nicole found the whole experience very insightful and thoroughly enjoyed it, as such, she selected a simialr themed project for her PhD Thesis. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Hosted sixth form students visit for two weeks |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | For two weeks we hosted four sixth form students with the purpose of showing some of the research that we undertake at the institute, as well as basic training in bioinformatics. This was extremely useful for the students, exposing them to a research environment of which, one was thinking of pursuing a research career in the future. We gave several talks, wet-lab and dry-lan training sessions as well as hand-on in the field sampel collection. |
| Year(s) Of Engagement Activity | 2017 |
| Description | Hosting and Training of PhD students from Tanzania |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Postgraduate students |
| Results and Impact | We hosted three PhD students at Earlham Institute for up to one month - the visit helped to develop their understanding and technical ability in several key genomic areas; this includes DNA/RNA extraction protocols, library preparation protocols, sequencing technologies and subsequent bioinformatics data analysis techniques. All of this was beneficial for developing current and future aquaculture projects. Also, by undertaking a course on Population Variation Genetics hosted at Earlham Institute in May, the students felt better prepared to carry out RAD data analysis (as part of their PhD) as well as other associated techniques, like phylogenetic analysis. Details: Names: Levinus Leonard Christer Nyinondi Redempta Kajungiro Institutions: University of Dar Es Salaam and University of Dodoma, Tanzania Dates: Levinus - 27/04/2017 to 28/05/2017 Christer and Redempta - 20/05/2017 to 28/05/2017 |
| Year(s) Of Engagement Activity | 2017 |
| Description | How Earlham Institute influenced my career path |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Nuffield Research Programme student Sophie Kirkwood tells us what it was like to work at EI and how it has influenced her decision to embark upon a STEM career. SOCIAL MEDIA Engagement 79 Impressions 72931 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/how-earlham-institute-influenced-my-career-path |
| Description | How do you know if you'll hack it in the real world? |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Blog post from Year in Industry student - Student Sam Horsfield tells us why his work placement at EI has been invaluable to his career. SOCIAL MEDIA Engagement 42 Impressions 31174 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/how-do-you-know-if-youll-hack-it-real-world |
| Description | How does your work impact society? (Mark McMullan British Science Week) |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Interview with Mark McMullan - promotion to run alongside the British Science Week event - SOCIAL MEDIA 66 Impressions 65683 |
| Year(s) Of Engagement Activity | 2017 |
| URL | https://vimeo.com/208499652 |
| Description | I'm a Scientist, Get Me Out Of Here |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | Several of our staff participated in the initiative, which allowed teenagers to pose questions to scientists, who were voted for in an "I'm a Celebrity" style competition. Challenged with making science more simple, our scientists had to sell their work to children. One member of staff actually won (!), which came along with a £500 grant for PE. |
| Year(s) Of Engagement Activity | 2014 |
| URL | https://imascientist.org.uk/ |
| Description | Immunity gene fusions uncovered in plants |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Dr Ksenia Krasileva, Group Leader at the Earlham Institute (EI) and Fellow at The Sainsbury Laboratory (TSL) in collaboration with her TSL colleagues, Professor Jonathan Jones and Dr Panagiotis Sarris, have surveyed immune genes across flowering plants to uncover the molecular 'traps' that plants use to detect pathogens. SOCIAL MEDIA Engagements 218 Impressions 78,500 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/newsroom/immunity-gene-fusions-uncovered-plants |
| Description | Impact story - Global Impact |
| Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Impact video to highlight EI research and global impact. VIEWS ON YOUTUBE 3433 |
| Year(s) Of Engagement Activity | 2016 |
| URL | https://www.youtube.com/watch?v=Bye-XjYGOzM |
| Description | Improving the Koala genome using the PDABS pipeline AGBT |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Advances in next-generation sequencing (NGS) technologies and the subsequent reduction in cost have enabled the research community to sequence the genomes of many non-model organisms. Genome assemblies using next generation technologies such as Illumina show high quality nucleotide level information, but are fragmented due to the inability to retain contiguity. The absence of low-cost methods for creating high quality genome sequences from a wide range of organisms currently hampers the generation of de novo genomes for comparative genomic studies, and new methodologies and data types need to be tested to achieve this goal. We have integrated NGS with nano-channel genome mapping and developed the PCR-free Discovar Assembly BioNano Scaffolding (PDABS) pipeline to assemble cheap, contiguous and robust genomes. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Inside Science Workshop |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | A workshop for college aged students interesting in pursuing a career in the life sciences beyond University. The event covered all aspects of life on the research park, with specific activities aimed at generating discussion around bioinformatics, including phylogenetics. |
| Year(s) Of Engagement Activity | 2014,2015 |
| Description | International Conference Oral Presentation: Discovery and visualisation of homologous genes and gene families using Galaxy |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The oral presentation at the International Plant and Animal Genomes Conference (San Diego, USA) conference was selected on abstract submission. The presentation was delivered in front of industry participants, donors, university professors and lecturers, postdoctoral researchers, graduates and undergraduates students. The poster presentation helped raising the international profile of Anil Thanki, Nicola Soranzo, Wilfried Haerty, Robert Davey and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2017 |
| Description | International Conference Poster Presentation: Evolution of tissue-specific regulatory programs in cichlids. |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The poster presented at the Cold Spring Harbour Biology of Genomes conference was selected on abstract submission. The poster was presented in front of university professors and lecturers, postdoctoral researchers, graduates and undergraduates students. The poster presentation helped raising the international profile of Tarang Metha, Luca Penso Dolfin, Tomasz Wrzesinski, Will Nash, Padhmanand Sudhakar, Wilfried Haerty, Tamas Korcsmaros, Federica Di Palma and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2017 |
| Description | International Conference Poster: Binding sites within long non-coding RNAs discriminate between RNA- and transcription mediated mechanism. |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The poster presented at the Cold Spring Harbour Biology of Genomes conference was selected on abstract submission. The poster was presented in front of university professors and lecturers, postdoctoral researchers, graduates and undergraduates students. The poster presentation helped raising the international profile of Tomasz Wrzesinski, Wilfried Haerty and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2017 |
| Description | International Conference poster presentation: Discovery and visualisation of homologous genes and gene families using Galaxy |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The poster presentation at the 18th The Bioinformatics Open Source Conference (BOSC), 25th Intelligent Systems for Molecular Biology (ISMB) and 16th European Conference on Computational Biology - ISMB/ECCB conference was selected on abstract submission. The poster was presented in front of industry participants, donors, university professors and lecturers, postdoctoral researchers, graduates and undergraduates students. The poster presentation helped raising the international profile of Anil Thanki, Nicola Soranzo, Wilfried Haerty, Robert Davey and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2017 |
| Description | Into the light - the power of optical HPC |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Article to highlight the collaboration between EI and Optalysys - EI and the HPC hardware provider Optalysys joined forces to introduce the ground-breaking optical processing device GENESYS to perform large-scale DNA sequence searches for crucial genomics research powered by just a mains supply, and aims to be one of the top 50 fastest processing devices in the world by 2017. SOCIAL MEDIA Engagement 65 Impressions 47,900 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/light-power-optical-hpc |
| Description | Invaders from the Far East: Ash dieback |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | Article on disease |
| Year(s) Of Engagement Activity | 2018 |
| Description | Invited seminar: Characterization of transcriptional complexity of Voltage Gated Calcium Channels in the human brain using Nanopore long read sequencing |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited seminar at the Division of Evolution & Genomic Sciences, University of Manchester. The audience was composed of group leaders, University lecturers, postdoctoral researchers, graduates and undergraduates students interested in RNA biology. |
| Year(s) Of Engagement Activity | 2018 |
| Description | Invited seminar: Comparative genomics of Australian marsupials: Expansion of gene families and signatures of selection following an ancient divergence |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited seminar at University College Dublin presented by Will Nash. The audience was composed of University professors and Lecturers, postdoctoral researchers, graduates and undergraduates students. Outcomes: Increased the international profile of Will Nash and Wilfried Haerty and increased the international profile of the Earlham Institute |
| Year(s) Of Engagement Activity | 2017 |
| Description | Invited seminar: Nanopore cDNA sequencing reveals transcriptional complexity of CACNA1C gene in human brain |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited seminar at the MRC Institute of Genetics and Molecular Medicine. The audience consisted group leaders, University professors, University Lectures, postdoctoral researchers, graduates and undergraduates students. |
| Year(s) Of Engagement Activity | 2017 |
| Description | Invited seminar: Nanopore cDNA sequencing reveals transcriptional complexity of CACNA1C gene in human brain |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited seminar in the satellite meeting of The Americal Society for Human Genetics organised by Oxford Nanopore. The audience of the seminar was composed of industrial professionals, group leaders, university professors and lecturers, postdoctoral researchers, graduates and undergraduate students. The seminar allowed to raise the personal profile of Wilfried Haerty and to raise the profile of the Earlham Institute |
| Year(s) Of Engagement Activity | 2017 |
| Description | Invited speaker International Institution: Characterization of functional long non-coding RNAs and their expression in the developing human brain |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The presentation took place as the result of an invitation to present at the ICenter for Regenerative Therapies Dresden. The audience was composed of university lecturers, graduate and undergraduate students. The presentation helped raising the international profile of Wilfried Haerty and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2017 |
| Description | Invited speaker International Institution: Characterization of functional non coding sequences |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The presentation took place as the result of an invitation to present at the Evolution, Genomes and Speciation Laboratory, CNRS, Gif sur Yvette, France. The audience was composed of university lecturers, graduate and undergraduate students. The presentation helped raising the international profile of Wilfried Haerty and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2016 |
| Description | Invited speaker International Institution: Expression of lncRNAs across the human lifespan |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The presentation took place as the result of an invitation to present at the Center for Genomic Regulation, Barcelona, Spain. The audience was composed of university lecturers, graduate and undergraduate students. The presentation helped raising the international profile of Wilfried Haerty and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2016 |
| Description | Invited talk - Semiquantitative characterisation of mixed pollen samples using nanopore sequencing and Reverse Metagenomics (RevMet) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited speaker at Natural History Museum Next Generation Sequencing and Molecular Workshop, 13th February 2020. |
| Year(s) Of Engagement Activity | 2020 |
| Description | It's not all about the money: Community investment |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Earlham Institute supports the AAAS Community Engagement Fellows Program - where budding community managers benefit from a shared knowledge base and peer support to excel their careers and make inroads to the scientific research network. SOCIAL MEDIA Engagement 30 Impressions 61670 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/it%E2%80%99s-not-all-about-money-community-investment |
| Description | Just chilling: algae and the Antarctic |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Algae are an exceptional bunch of organisms for many reasons: particularly, they are responsible for half of the photosynthesis that takes place on the planet - and because of that - the oxygen in every second breath we take. SOCIAL MEDIA Engagement 51 Impressions 63821 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/just-chilling-algae-and-antarctic |
| Description | Just one more Ash Dieback spore could push European ash trees to the brink |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | News article on disease |
| Year(s) Of Engagement Activity | 2018 |
| Description | KAT got your tongue? An analysis tool to quickly detect problems in sequencing data and genome assemblies |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | KAT, the K-mer Analysis Toolkit, developed at the Earlham Institute, represents a necessary step to ensure that this is the case - allowing bioinformaticians to work more efficiently and ultimately improve the quality of genome projects. SOCIAL MEDIA Engagements 212 Impressions 96,700 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/kat-got-your-tongue-analysis-tool-quickly-detect-problems-sequenci... |
| Description | London International Youth Science Forum |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Schools |
| Results and Impact | An international group of students who visit the research park on a yearly basis. These students are some of the brightest from around the world, interested in science in general. One such attendee I knew personally from her company that won the Google Award when she was just 14, highlighting the calibre of young people that this event welcomes. |
| Year(s) Of Engagement Activity | 2015,2016 |
| Description | Long non-coding RNAmazing: X marks the spot |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Joint article with researcher WIlfried Haeryt on long non coding RNA - We used to think that only 1% of the human genome had any use. Oh, how times change. The more we delve into the treasure trove of genetic information present in diverse genomes, from humans and worms to Arabidopsis and wheat, the more we have come to appreciate the bounty of non-coding elements that lie within. Among the buried treasure - that composes just a small percentage of a genome - lie long non-coding RNAs (lncRNA), some of which, far from being junk, can provide insights into important regulatory mechanisms across all domains of life. SOCIAL MEDIA Engagement 183 Impressions 77,300 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/long-non-coding-rnamazing-x-marks-spot |
| Description | Looking to aquaculture |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Interview article - We interview Antonia Ford, postdoctoral researcher at EI and Bangor University, who tells us all about aquaculture - and how understanding the genomics of native and introduced Tilapia species in Tanzania can help aquaculture breeders in the future. SOCIAL MEDIA Engagement 152 Impressions 120,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/looking-aquaculture |
| Description | Maximising impact |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Postgraduate students |
| Results and Impact | KEC team seminar on why impact is important, ways to maximise impact and how the KEC Office can help. Session included a talk from Liliya Serazetdinova of The Knowledge Transfer Network (KTN) proviiding nsight into the UK Agri-Tech Strategy, current funding landscape and latest funding opportunities from Innovate UK (including new Agri-Tech Catalyst Round), Newton Fund, BBSRC and Horizon 2020, as well as the role of KTN in driving UK innovation. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Member of MinION Analysis and Reference Consortium (MARC) |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | MARC is a consortium of scientists who seek to work together to understand how to get the best out of nanopore technology and to collaborate on international experiments and publications. So far, we have published two papers together which seek to describe and evaluate MinION technology. We are now working on a third publication based on an experiment to sequence river water around the world using nanopore sequencing. |
| Year(s) Of Engagement Activity | 2015,2016,2017,2018 |
| Description | MinIONs, MAP and MARC: Nanotechnology developments |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Highlighting our work with the Minion Nanopore We're working with the latest in nanopore sequencing technology to push the boundaries of low-cost, portable genomics solutions. SOCIAL MEDIA Engagement 86 Impressions 76,100 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/minions-map-and-marc-nanotechnology-developments |
| Description | Moku virus highlights potential threat to pollinators worldwide |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Article - Honey bees are as vital to our food systems as the crops they pollinate; with a swathe of economically important plants relying directly on bees for propagation. A recent study published in Nature highlighted a novel potential threat to these key creatures: an iflaviurscommon to wasps, bees and varroa mites, featuring the work of Purnima Pachori of Earlham Institute's Platforms & Pipelines Group. SOCIAL MEDIA Engagements 109 Impressions 112,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/moku-virus-highlights-potential-threat-pollinators-worldwide |
| Description | Morogoro workshop on Tilapia Aquaculture |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Workshop looking at opportunities and challenges in Tanzanian tilapia fisheries and aquaculture programme. Programme included: Biodiversity, endemism, and importance/potential of native species to fisheries and aquaculture; Aquaculture initiatives in Tanzania, impact of non-native species stocked in natural water bodies on native species; Tanzanian tilapia species identification and sample collection; The TilapiaMap project and use of smartphone application; Group discussions and feedback on training needs and provision in Tanzania; Tour of facilities at Sokoine University, description of on-going aquaculture projects. |
| Year(s) Of Engagement Activity | 2017 |
| Description | My obscure route into science: Graham Etherington |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Interview with Graham Etherington - We interview Graham Etherington of our Regulatory and Systems Genomics Group, who fills us in about his journey from the RAF to the Falklands and finally to EI - as well as his love for all things avian. SOCIAL MEDIA Engagements 171 Impressions 78,400 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/my-obscure-route-science-graham-etherington |
| Description | My obscure route into science: Jim Lipscombe |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | We interviewed Jim Lipscombe form our Platform's and pipelines group about his route into science. It's time for round two - and this week we feature Jim Lipscombe of our Platforms & Pipelines Group, who most certainly did not have a typical route into a science career. Read on to discover Jim's range of former jobs (from pubs to roofs and vineyards), his love for next generation sequencing, naked mole rats, making lego robots to better communicate science, and more! SOCIAL MEDIA Engagement 228 Impressions 116,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/my-obscure-route-science-jim-lipscombe |
| Description | NERC GCRF Workshop Sustainable Development Goal Interactions: The role of environmental science |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Federica Di Palma gave an elevator pitch talk is "Reclaiming land lost to violence for the security of Colombian economy and society". |
| Year(s) Of Engagement Activity | 2017 |
| Description | NanoOK of the North and South |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | EI website article about our work developing the nanopore analysis software NanoOK |
| Year(s) Of Engagement Activity | 2019 |
| URL | http://www.earlham.ac.uk/articles/nanook-north-south-life-in-antarctic |
| Description | National Conference Poster Presentation: Evolutionary History and Domestication of the Ferret (Mustela putorius furo) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | The poster presented at the Genome Science conference was selected on abstract submission. The poster was presented in front of university professors and lecturers, postdoctoral researchers, graduates and undergraduates students. The poster presentation helped raising the national profile of Graham Etherington, Wilfried Haerty, Federica Di Palma and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2016 |
| Description | National Institutes of Bioscience Meeting talk |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Participation at the National Institutes of Bioscience Meeting giving a talk on "The Norwich Research Park: A systems biology approach to human Health" |
| Year(s) Of Engagement Activity | 2015 |
| Description | New Investigator Award to help arrest global cereals killer |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Dr Ksenia Krasileva, Group Leader at the Earlham Institute (EI) and The Sainsbury Laboratory (TSL), has been awarded a New Investigator award from the Biotechnology and Biological Sciences Research Council (BBSRC) to find and breed plants that can better fend off this disease, and potentially reduce the use of pesticides. |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://earlham.ac.uk/new-investigator-award-help-arrest-global-cereals-killer |
| Description | New Scientist Live |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | A widely attended event over several days in London, we reached a vast audience and discussed the use of NGS & big data in the life sciences with interested laypeople. |
| Year(s) Of Engagement Activity | 2016 |
| Description | New integrative data portal for brilliant brassicas 12 May 2016 |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Scientists at the Earlham Institute (EI) have released the first web repository for Brassica (mustard plants) trait data to tackle reproducibility, user controlled data sharing and analysis worldwide. SOCIAL MEDIA Engagements 138 Impressions 183,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/newsroom/new-integrative-data-portal-brilliant-brassicas |
| Description | New online tool helps predict gene expression in plants |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Scientists at the Earlham Institute (EI) and the John Innes Centre (JIC) have developed a free online tool that will help a global community of scientists understand more about important food crops. SOCIAL MEDIA Engagements 225 Impressions 111,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/newsroom/new-online-tool-helps-predict-gene-expression-plants |
| Description | Newtons Apple Press Release |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Press release to promote the sequencing of an apple from Newton's apple tree Scientists will connect two of the most important scientific theories of all time - the law of universal gravitation and the theory of evolution - by unravelling the genetic code of the apple which inspired Isaac Newton's greatest discovery 350 years ago this year. - Social - Engagement 167 Impressions 109,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/newsroom/evolution-ideas-scientists-decode-genetic-story-newton%E2%80%99s-a... |
| Description | Non-human genomes: why bother? |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | The benefits of the human genome project are clear for all to see. We have gained tremendous knowledge of the genetic basis of disease and can better predict whether we are susceptible to certain conditions - ushering us into a promising new era of personalised genomics for medicine and nutrition. SOCIAL MEDIA Engagement 146 Impressions139,000 |
| Year(s) Of Engagement Activity | 2015,2016 |
| URL | http://www.earlham.ac.uk/non-human-genomes-why-bother |
| Description | Norfolk Women's Institute |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | We opened our doors to the Women's Institute of Norfolk, to whom we delivered a three part workshop during which they had lab tours, data centre tours and a DNA extraction workshop, hosted by many of our platforms and pipelines team. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Norwich Science Festival - Lego DNA sequencer |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | We created a working Lego Mindstorms model of a DNA sequencer, along with software to run it. We arranged activities around it during the Norwich Science Festival and engaged lots of adults and children. |
| Year(s) Of Engagement Activity | 2018 |
| URL | https://twitter.com/brickopore/status/1055043270999465985 |
| Description | Norwich Science Festival - The Nedome |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | During Norwich Science Festival, we ran live demonstrations of nanopore sequencing in which we sequenced the "Ned-ome" (DNA kindly provided by Ned, a PhD student). |
| Year(s) Of Engagement Activity | 2018 |
| URL | https://twitter.com/hashtag/nedome?lang=en |
| Description | Norwich Science Park Open Day |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Presented poster on work linked to Big Data Bioinformatics |
| Year(s) Of Engagement Activity | 2016 |
| Description | Nuffield plant science placements |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | Each year a number of Nuffield placement students come to the research park. Each year, we have given them an insight into what goes on at EI (TGAC), with tours and activities, as well as occasional placements. |
| Year(s) Of Engagement Activity | 2015,2016,2017 |
| Description | Of Mice and Men: life at the limits |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | How are mice so adaptable to extreme environments? We speak to EI Fellow David Thybert about the hardy desert mouse. SOCIAL MEDIA Engagement 76 Impressions 110,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/articles/mice-and-men-life-limits |
| Description | Omnipath sends strong signal |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Omnipath unifies 27 data resources on biological pathways, helping scientists better understand interactions between signalling proteins. Published in Nature Methods, the Omnipath data resource and Pypath software offer an unprecedentedly clear view on signalling pathways in living systems. Social Media - Engagement 288 Impressions 149,000 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/omnipath-sends-strong-signal |
| Description | Open Day |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Open day at the institute, poster presentation on Evolution of tissue-specific regulatory programs in cichlids - engaging with the general public allowed for public awareness of our research and imapct, as well as sparking questions and general discussion surrounding the importance of this age of genomics research. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Open Lecture for the School of Biology at the University of East Anglia |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Undergraduate students |
| Results and Impact | I gave an open lecture, followed by questions and 1:1 meetings with faculty and students at the UEA |
| Year(s) Of Engagement Activity | 2015 |
| Description | Open data sharing: how and why? |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Blog post on open data sharing The more open biological data is, and the better it is shared, the more we can hope to get out of it for the benefit of all. SOCIAL MEDIA Engagement 15 Impressions 17801 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/open-data-sharing-how-and-why |
| Description | Oral Presentation - Norwich Science Festival |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Around 40 people attended a talk given on "Food for thought" - understanding biodiversity and it's impact on life and health; this sparked extensive questions and discussion afterwards. As a result, the event reported great interest in the area of biodiversity, fish biology and aquaculture (fish-farming). |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://norwichsciencefestival.co.uk/events/food-for-thought/ |
| Description | Oral presentation at international conference: Characterization of functional long non-coding RNAs in human |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The presentation at the Genome 10K / Genome Science conference was selected on abstract submission. The presentation was delivered in front of industry participants, university professors and lecturers, postdoctoral researchers, graduates and undergraduates students. The presentation helped raising the international profile of Wilfried Haerty and of the Earlham Institute |
| Year(s) Of Engagement Activity | 2017 |
| Description | Our Director of Science honoured for Biological and Medical Sciences |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | Director of Science Dr Federica Di Palma is awarded two honorary professorships by the University of East Anglia (UEA) for the School of Biological Sciences and Norwich Medical School. SOCIAL MEDIA Engagement 132 Impressions 33,400 |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.earlham.ac.uk/newsroom/our-director-science-honoured-biological-and-medical-sciences |
| Description | Our top ten from 2016 at Earlham Institute |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | 2017 has swung in with full force and springtime is now just around the corner. We thought we'd look back on which of our articles, features and news stories were most popular in 2016. SOCIAL MEDIA Engagement 97 Impressions 80005 |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.earlham.ac.uk/our-top-ten-2016-earlham-institute |
| Description | PRES RELEASE: Scientists close gap on devastating cereal killer |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Scientists close gap on devastating cereal killer |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: "Tinkering" - evolution through gene regulation |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | "Tinkering" - evolution through gene regulation |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: 100,000 human genomes to help fight cancer and rare disease |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | 100,000 human genomes to help fight cancer and rare disease |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Accelerating forage breeding to boost livestock productivity |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The Genome Analysis Centre (TGAC), with partners in the UK, Colombia and Kenya bring together their leading expertise in forage breeding for animal nutrition, cutting-edge genomics and phenomics technologies, to accelerate the improvement of Brachiaria, a vital livestock forage crop in central Africa and Latin America. |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: An integrated approach combining genomics, genetics and agronomy to improve the European wheat and barley production |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | An integrated approach combining genomics, genetics and agronomy to improve the European wheat and barley production |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: BGI and TGAC join efforts to tackle global challenges in food security, energy and health. |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | BGI and TGAC join efforts to tackle global challenges in food security, energy and health. |
| Year(s) Of Engagement Activity | 2013 |
| Description | PRESS RELEASE: Barley genome could hold key to better crops |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Barley genome could hold key to better crops |
| Year(s) Of Engagement Activity | 2012 |
| Description | PRESS RELEASE: BioJS collection of open-access visualisation tools released |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | BioJS collection of open-access visualisation tools released |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: Bioscience and Industry UK collaboration to significantly reduce HPC energy consumption |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Bioscience and Industry UK collaboration to significantly reduce HPC energy consumption |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Black-footed Ferret: Reviving a declining population |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Black-footed Ferret: Reviving a declining population |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Bread wheat genome dataset will help to improve crop |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Bread wheat genome dataset will help to improve crop |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: Bringing science to life in Norwich |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Bringing science to life in Norwich |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Business Secretary Vince Cable announces £40M for UK synthetic biology |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Business Secretary Vince Cable announces £40M for UK synthetic biology |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Chair of TGAC's Scientific Advisory Board elected to the Fellowship of the Academy of Medical Sciences |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Chair of TGAC's Scientific Advisory Board elected to the Fellowship of the Academy of Medical Sciences |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Changing the biological data visualisation world |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Scientists at TGAC, alongside European partners, have created a cutting-edge, open source community for the life sciences. BioJavaScript (BioJS) is a free, accessible software library that develops visualisation tools for different types of biological data. Data visualisation allows researchers to present their data to communicate key scientific hypotheses and concepts to a wider audience. Helping us to understand complex biological systems in relation to improving plant, animal and human health. |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Contribution to wheat genome in spotlight at supercomputing conference |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Contribution to wheat genome in spotlight at supercomputing conference |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: Crowd-sourcing the E. coli |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Crowd-sourcing the E. coli |
| Year(s) Of Engagement Activity | 2011 |
| Description | PRESS RELEASE: DNA Synthesis at the Norwich Research Park |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The Genome Analysis Centre (TGAC) has been awarded £1.9M to establish a DNA synthesis facility at the Norwich Research Park (NRP). TGAC has been selected as one of only five centres across the UK to develop a state-of-the-art DNA synthesis centre in Norwich. The facility aims to support the design, generation and exploitation of high-value compounds and bioactives obtained from plants and microbes to contribute to areas of strength within the NRP. Recent advances in DNA technologies have stimulated the development of innovative research in synthetic biology. The investment announced today will equip the NRP with the cutting-edge technology in DNA synthesis that will build on the existing National Capability in Genomics at TGAC and help to propel the UK to the forefront of synthetic biology research. |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: Data integration or die: the importance of biologist input in efficiently sharing data |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Vicky Schneider, 361° Division (Training, Public Engagement, Best Practice & e-Science) at The Genome Analysis Centre TGAC, along with UK and European partners, has reviewed key aspects of standards and formats of biological data to highlight the importance of data integration and management tools for biologists. |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Deputy PM visits TGAC as part of City Deal signed at Norwich Research Park |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Deputy PM visits TGAC as part of City Deal signed at Norwich Research Park |
| Year(s) Of Engagement Activity | 2013 |
| Description | PRESS RELEASE: Discovering the decoding of living systems |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Discovering the decoding of living systems |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Dissecting the genomes of crop plants to improve breeding potential |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Dissecting the genomes of crop plants to improve breeding potential |
| Year(s) Of Engagement Activity | 2011 |
| Description | PRESS RELEASE: European collaboration explores neighbourhoods of trees in circular orderings |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | European collaboration explores neighbourhoods of trees in circular orderings |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Faster, better, cheaper: a new method to generate extended data for genome assemblies |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Faster, better, cheaper: a new method to generate extended data for genome assemblies |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Feeding the world: the importance of crop genomics |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Feeding the world: the importance of crop genomics |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Ferret genome study provides clues to how the respiratory system responds to pandemic flu and cystic fibrosis |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Ferret genome study provides clues to how the respiratory system responds to pandemic flu and cystic fibrosis |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: Genetic blueprint of bread wheat genome unveiled to improve world's most popular cereal crop |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Genetic blueprint of bread wheat genome unveiled to improve world's most popular cereal crop |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: Genome sequence for mother of ash dieback survival |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Genome sequence for mother of ash dieback survival |
| Year(s) Of Engagement Activity | 2013 |
| Description | PRESS RELEASE: Genome sequence sheds new light on how plants evolved nitrogen-fixing symbioses |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Genome sequence sheds new light on how plants evolved nitrogen-fixing symbioses |
| Year(s) Of Engagement Activity | 2011 |
| Description | PRESS RELEASE: Has TGAC got the science X factor? |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The Genome Analysis Centre (TGAC) will be taking part in this year's I'm a Scientist Get me Out of here on 16 - 27 June 2014, an outreach event that brings together scientists and students from around the world. |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: Healthy-looking prostate cells mask cancer-causing mutations |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Healthy-looking prostate cells mask cancer-causing mutations |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Hidden genetic variants revealed by new computational technique |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Hidden genetic variants revealed by new computational technique |
| Year(s) Of Engagement Activity | 2012 |
| Description | PRESS RELEASE: Hot processor speeds up UK genome analysis |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The Genome Analysis Centre (TGAC) is the first institute in the U.K. to deploy a new bioinformatics processor called DRAGEN™, which dramatically reduces genomic pipeline runtimes from hours to minutes. This collaboration between Edico Genome and TGAC resulted in the first adaptation of the DRAGEN technology for the analysis of non-human genomes as part of the Institute's endeavours to sequence the DNA of plant, animal and microbial species to promote a sustainable bioeconomy. |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: How fishy is the human genome? |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | How fishy is the human genome? |
| Year(s) Of Engagement Activity | 2013 |
| Description | PRESS RELEASE: How to escape big data and cancer with data integration and broccoli |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | How to escape big data and cancer with data integration and broccoli |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: How to fascinate local children with plants |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | How to fascinate local children with plants |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: How to visualise and interpret biological data |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | How to visualise and interpret biological data |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: How will Metagenomics revolutionise the understanding of the living world? |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | How will Metagenomics revolutionise the understanding of the living world? |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: How will we feed a global population of nine billion by 2050? |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | How will we feed a global population of nine billion by 2050? |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Images with Impact Competition Open House |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Images with Impact Competition Open House |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: Inside Science Workshop for Students (Yrs 11-13) |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The Genome Analysis Centre (TGAC) opened its doors to seventeen talented science students as part of Inside Science, a John Innes Centre (JIC) led event targeted at inspiring pre-university students to pursue a career in science. |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: International Consortium Sequences Tomato Genome |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | International Consortium Sequences Tomato Genome |
| Year(s) Of Engagement Activity | 2012 |
| Description | PRESS RELEASE: Landmark study reveals diverse molecular mechanisms underlying evolution |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Landmark study reveals diverse molecular mechanisms underlying evolution |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: Metagenomics gone viral |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Metagenomics gone viral |
| Year(s) Of Engagement Activity | 2013 |
| Description | PRESS RELEASE: Mini DNA sequencer tests true |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The performance of the MinION™ miniature DNA sequencing device has been evaluated by an open, international consortium, and the resulting recommendations and protocols published before peer-review on the F1000Research platform. |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: NGS expert leads world-class Institute's cutting-edge genome analysis |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | NGS expert leads world-class Institute's cutting-edge genome analysis |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: NanoOK: Quality Control for portable, rapid, low-cost DNA sequencing |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | NanoOK: Quality Control for portable, rapid, low-cost DNA sequencing |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: New big data pushes bioinformatics training in life sciences |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | New big data pushes bioinformatics training in life sciences |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: New genomics-driven surveillance to track crop diseases |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | New genomics-driven surveillance to track crop diseases |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: New improved annotation of canine genome released to identify disease mutations and aid understanding of similar human causes |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | New improved annotation of canine genome released to identify disease mutations and aid understanding of similar human causes |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: New research leader to improve wheat genomics joins TGAC and TSL |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | New research leader to improve wheat genomics joins TGAC and TSL |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: New research reveals the genetic basis for animal domestication out of a rabbit hole |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | New research reveals the genetic basis for animal domestication out of a rabbit hole |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: New resource to study the mechanism and regulation of autophagy to fight human disease |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | New resource to study the mechanism and regulation of autophagy to fight human disease |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: New sequence of naked mole rat genome facilitates cancer resistance research |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | New sequence of naked mole rat genome facilitates cancer resistance research |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: New software helps researchers solve genomic 'jigsaw puzzle' |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | New software helps researchers solve genomic 'jigsaw puzzle' |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: New study reveals improved way to interpret high-throughput biological data |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | New study reveals improved way to interpret high-throughput biological data |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: New world-class scientific collaboration to use genomics to combat devastating crop rusts |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | New world-class scientific collaboration to use genomics to combat devastating crop rusts |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Novel online bioinformatics tool significantly reduces time of multiple genome analysis |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Novel online bioinformatics tool significantly reduces time of multiple genome analysis |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Parasite provides clues to evolution of plant diseases |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Parasite provides clues to evolution of plant diseases |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Pig Genome Insights Could Lead to Improved Human Health |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Pig Genome Insights Could Lead to Improved Human Health |
| Year(s) Of Engagement Activity | 2012 |
| Description | PRESS RELEASE: Pioneering women in science: Ada Lovelace Day |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | To celebrate Ada Lovelace Day, The Genome Analysis Centre (TGAC) is running a campaign to raise awareness of the integral role women have played in scientific discovery. Often they are not represented as well historically, while many have made huge contributions to science without recognition. |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Prestigious scholarship award for visiting wheat yellow rust PhD student at TGAC |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Prestigious scholarship award for visiting wheat yellow rust PhD student at TGAC |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Publishing open data in the plant sciences |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Publishing open data in the plant sciences |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Record-breaking data centre for genome sequencing opened in Norwich |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Record-breaking data centre for genome sequencing opened in Norwich |
| Year(s) Of Engagement Activity | 2011 |
| Description | PRESS RELEASE: Red clover genome to help restore sustainable farming |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Red clover genome to help restore sustainable farming |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Safeguarding Europe's life science research |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Safeguarding Europe's life science research |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Saving the climate with grass |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | Saving the climate with grass |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Scientists drill down to genetic root of prostate tumour development |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Scientists drill down to genetic root of prostate tumour development |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Sequencing Technologies now and in 25 years. |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Sequencing Technologies now and in 25 years. |
| Year(s) Of Engagement Activity | 2013 |
| Description | PRESS RELEASE: Single-cell technologies advance the value of genomics |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Single-cell technologies advance the value of genomics |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Supercomputer specialist joins TGAC |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Supercomputer specialist joins TGAC |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC Director to step down |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC Director to step down |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC ISPG - Developing Strategies for Big Data Bioinformatics |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Metagenomics gone viral |
| Year(s) Of Engagement Activity | 2013 |
| Description | PRESS RELEASE: TGAC Understanding Life on Earth |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC Understanding Life on Earth |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC and BIOS come together to improve global food security |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Director Mario Caccamo and Computational Biology Group Leader Dr Sarah Ayling at The Genome Analysis Centre (TGAC) visited BIOS, Colombia's Centre for Bioinformatics and Computational Biology, to explore potential collaborations in crop genomics and bioinformatics. |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC and JIC identify new genetic markers to combat yellow rust disease in wheat |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC and JIC identify new genetic markers to combat yellow rust disease in wheat |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC and scientific partners awarded £6m to tackle big data challenges in bioscience |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC and scientific partners awarded £6m to tackle big data challenges in bioscience |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC announces new Director of Science to support Institute's pioneering vision and expertise |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC announces new Director of Science to support Institute's pioneering vision and expertise |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC appoints Director of Operations to deliver world class science |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The Genome Analysis Centre (TGAC) is today pleased to announce the appointment of Sarah Cossey as Director of Operations. Sarah Cossey CPFA MAAT, joined TGAC in 2011, as Finance and Operations Manager, and since early 2013 has been Acting Deputy Director (Operations). As Director of Operations, Sarah will have responsibility for four groups: Platforms and Pipelines, External Relations, Scientific Computing and Finance and Business Support. |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC appoints US genomics expert as head of Vertebrate and Health Genomics Group |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC appoints US genomics expert as head of Vertebrate and Health Genomics Group |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC appoints new Director |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC appoints new Director |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC at Science in Norwich Day |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC will join some of the 2,500 local scientists at Science in Norwich Day 2014, showcasing the remarkable research that takes places in Norfolk (UK). |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC at the forefront of Next Generation Sequencing capability |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC has expanded their sequencing capabilities by adding two Illumina HiSeq 2500 to its cutting-edge platform suite. The new HiSeqs are able to generate up to 1 Terabase (Tb) of sequence data per run. This new addition will enhance TGAC's role as a BBSRC National Capability in Genomics. |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC attracts leading international young scientists |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The Genome Analysis Centre's public engagement programme TGAC4Kids on the road visits Norwich High School for Girls Junior School and Lionwood Junior School, running interactive and informative activities to further the students' understanding of cells, DNA and evolution. |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC awarded £100k to combat sugar beet crop infection in the UK |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC awarded £100k to combat sugar beet crop infection in the UK |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC awarded £150k to help boost science innovation |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC awarded £150k to help boost science innovation |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC becomes a centre of excellence in UK for ground-breaking whole genome mapping technology |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC becomes a centre of excellence in UK for ground-breaking whole genome mapping technology |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC encourages future UK scientists to get into genomics |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC encourages future UK scientists to get into genomics |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC help improve harvests by completing genome sequence of model soil bacterium |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC help improve harvests by completing genome sequence of model soil bacterium |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC helps define computational biology curriculum for bioinformatics professionals |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC helps define computational biology curriculum for bioinformatics professionals |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC helps monitor infectious outbreaks with genome sequencing technologies |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC helps monitor infectious outbreaks with genome sequencing technologies |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC host "NGS Data after the Gold Rush" with European partners |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC led the training workshop with European partner SeqAhead, Cooperation in Science and Technology (COST) Action, which aims to comprehend Next Generation Sequence (NGS) data and galvanise efficient workflows for NGS data storage, retrieval and analysis. |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC hosts 2nd UK Bioinformatics Student Symposium |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC hosts 2nd UK Bioinformatics Student Symposium |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC hosts first BioJS conference for open-access data visualisation |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The BioJS community, led by Manuel Corpas, Project Leader at TGAC, in partnership with genomics start-up Repositive.io, will bring together researchers and bioinformatics developers with an interest in data visualisation as well as SMEs, Big Pharma and industry applying BioJS for their customer needs. |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC interim Director announced |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC interim Director announced |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC launches MISO: A free open source LIMS for NGS |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC launches MISO: A free open source LIMS for NGS |
| Year(s) Of Engagement Activity | 2012 |
| Description | PRESS RELEASE: TGAC leads development to diminish threat to Vietnam's most important crop |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | PRESS RELEASE: TGAC leads development to diminish threat to Vietnam's most important crop |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC leads research to help identify animal-to-human transmitted diseases |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC leads research to help identify animal-to-human transmitted diseases |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC partner with The Pirbright Institute to help combat swine flu |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC partner with The Pirbright Institute to help combat swine flu |
| Year(s) Of Engagement Activity | 2013 |
| Description | PRESS RELEASE: TGAC post-grad student awarded IWGSC Early Career award |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC post-grad student awarded IWGSC Early Career award |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC reinvents traditional horticulture with unforgettable fusion |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC reinvents traditional horticulture with unforgettable fusion |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC releases new genetic data to combat ash dieback epidemic |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC releases new genetic data to combat ash dieback epidemic |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC releases study on new tools for effective quality assessment and control of NGS data |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC releases study on new tools for effective quality assessment and control of NGS data |
| Year(s) Of Engagement Activity | 2013 |
| Description | PRESS RELEASE: TGAC reveals novel insights into the induction of autophagy in leading science publication |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC reveals novel insights into the induction of autophagy in leading science publication |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC scientists release NextClip: a bioinformatics tool for complex post-sequence data analysis |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC scientists release NextClip: a bioinformatics tool for complex post-sequence data analysis |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC takes part in MinION Access Programme (MAP) for portable DNA sequencing |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | As one of the first research Institutes to take part in the MinION Access Programme (MAP) for portable DNA sequencing, introduced by Oxford Nanopore Technologies, The Genome Analysis Centre (TGAC)'s task force share their experience of the groundbreaking trial so far. |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: TGAC takes the lead towards a sustainable future for wheat genomics |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The Genome Analysis Centre (TGAC) hosted the workshop "Towards a sustainable future for wheat genomics" that introduces the latest, freely available wheat genomic resources and the new opportunities these bring for sophisticated analysis. |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC's Board of Trustees' Chair recognised in Queen's New Year Honours list |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC's Board of Trustees' Chair recognised in Queen's New Year Honours list |
| Year(s) Of Engagement Activity | 2013 |
| Description | PRESS RELEASE: TGAC's quick guide to Genomics and Bioinformatics Training for new audiences |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Traditionally, bioinformatics tools and training programs have focused on life science audiences. Though heterogeneous, their needs are at least fairly well understood. Driven by the impact of technology in diverse areas, bioinformatics is becoming increasingly interdisciplinary, and, in parallel, so too are the audiences seeking bioinformatics training. Audiences as disparate as physicians and lawyers, industry, and even the general public, previously without real need of bioinformatics skills or awareness, are now pursuing an understanding of and skill sets in bioinformatics. |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: TGAC's take on the first portable DNA sequencing 'laboratory' |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | TGAC's take on the first portable DNA sequencing 'laboratory' |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: The Genome Analysis Centre announces an important milestone in wheat research |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | The Genome Analysis Centre announces an important milestone in wheat research |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: UK-China collaboration for data sharing in metabolomics |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | UK-China collaboration for data sharing in metabolomics |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Uncovering associations between structural variations in DNA and genetic disorders |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Uncovering associations between structural variations in DNA and genetic disorders |
| Year(s) Of Engagement Activity | 2015 |
| Description | PRESS RELEASE: Understanding life on earth with Intel |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Understanding life on earth with Intel |
| Year(s) Of Engagement Activity | 2014 |
| Description | PRESS RELEASE: Unravelling the gen |