New Synthesis-Enabling Reactions and Reaction Cascades for the Discovery and Production of Potential Anti-Cancer Compounds

Lead Research Organisation: University of Oxford
Department Name: Oxford Chemistry

Abstract

Alongside the surgeon's knife and radiotherapy, chemotherapy is one of the most effective weapons especially on inoperable and aggressive cancers such as small cell lung cancer. To date there are still many more cancers than effective medicines and there remains the need for effective anti-cancer treatments that are both selective and potent. The majority of the existing drugs in clinical use are of natural origin or are man made analogues of these natural products. These (often) cytotoxic natural products are employed by the host organism as a means of self-defense and over millennia have evolved to be both potent and selective in their modes of action against predators. An excellent example is paclitaxel [taxol] first isolated from the pacific yew tree and currently used in the treatment of lung, ovarian and breast cancers. If the natural product can be harvested on scale and in a sustainable fashion, or be created by fermentation techniques in the laboratory, then an effective marketable drug can be developed. When this is not possible the only remaining option is to manufacture through the process of chemical synthesis. However, these target molecules often possess such complex three dimensional structures that the traditional, one-step, one-pot chemical synthesis approaches become so lengthy that only milligram quantities can be obtained. This problem maybe overcome by the strategic implementation of new synthesis enabling reactions and reaction cascades into chemical routes from appropriate and readily available starting materials. These can allow the construction of the complex target molecules in around 15 steps, compared with 30-40 steps using traditional approaches. Accessing complex molecules in around 15 steps means that these molecules (and libraries of analogues) may now be made at speed and possibly on gram scale. In addition, large quantities of late stage intermediates resembling in part the natural product can be accessed and converted into libraries of structurally simplified natural product analogues. Such synthesis capability may allow thorough biological evaluation for the first time and the creation of powerful structure / activity relationships that can be fed back into the synthesis cycle, potentially resulting in compounds with enhanced biological activity, and eventually lead to attractive drug candidates. Our group has been engaged over the past 3 years in the discovery and development of new asymmetric catalysts, new powerful catalyst-enabled synthetic methodology and most relevant to this proposal, new catalyst and multi-catalyst enabled reaction cascade sequences. Reaction cascades are powerful in synthesis as they allow a series of bond-forming reactions to occur in a single vessel / thus building complexity and maximizing efficiency. By judicious choice of starting materials and catalysts, advanced intermediates can be created in one efficient operation. During the five year Fellowship we wish to significantly expand the lines of research opened up by these preliminary studies, develop new catalyst enabled synthetic methodology and reaction cascades, and apply the findings to the total synthesis of a number of complex bioactive alkaloid natural products. For the first three years of the fellowship we wish to develop new chemistry and strategies leading to the short and effective stereoselective total synthesis of both daphniyunnine D and manzamine A (and their analogues for biological evaluation and the development of SAR).

Publications

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Darses B (2014) Facile multi-decagram synthesis of methyl but-2-ynoate in Organic Chemistry Frontiers

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De La Campa R (2015) Direct catalytic enantio- and diastereoselective ketone aldol reactions of isocyanoacetates. in Angewandte Chemie (International ed. in English)

 
Description New chemical cascade processes to complex and desirable molecular scaffolds were developed using spatially defined multifuncational catalysts as the key stereochemical controller in carbon-carbon bond forming steps. These new catalysed processes will find general use in the pharmaceutical and fine chemicals sectors. Put together these processes allowed us to define the first genuinely short and effective route to complex marine anticancer products nakadomarin A, manzamine A and the core scaffolds of various daphniphyllum alkaloids. Thus the arising methods and processes will find use in both academic and industrial contexts and the late stage products coud find use as leads in both biology and medicine.
Exploitation Route The catalysts and methodologies that were developed as part of this project were particularly effective at constructing functionally dense, stereochemically defined scaffolds in single pot procedures. As such they will find use in both library synthesis and target synthesis in industry. The construction of chiral products in single enantiomeric form is industrially relevant. Having generated new and effective routes to bioactive natural products, the creation of molecular probes based on these chemistries is made particularly simple. This work is currently in progress with the aim of identifying the cellular targets of manzamine A and its relatives.



Identifying new and effective routes to functionally dense, stereochemically defined scaffolds in single pot procedures will allow pharmaceutical companies to design new lead scaffolds on the back of this chemistry.
Sectors Chemicals,Healthcare,Pharmaceuticals and Medical Biotechnology

URL http://www.organic-chemistry.org/Highlights/2013/06May.shtm
 
Description Catalysts and methods arising from this project are being applied by industry to generate new medicines and pharmaceuticals.
First Year Of Impact 2014
Sector Chemicals,Healthcare,Pharmaceuticals and Medical Biotechnology
Impact Types Economic

 
Title BIFUNCTIONAL ORGANIC CATALYSTS 
Description The present invention provides a bifunctional catalyst of the formula (1): wherein: each R1 is independently selected from an optionally substituted alkyl group, an optionally substituted cycloalkyl group, an optionally substituted aryl group, an optionally substituted heteroaryl group, an optionally substituted aralkyl group and an optionally substituted alkaryl group; Z represents a divalent organic linking moiety optionally containing one or more stereocentres; and EWG represents an electron-withdrawing group. 
IP Reference WO2014064466 
Protection Patent application published
Year Protection Granted 2014
Licensed No
Impact Currently catalysts are on sale at Fluorochem