A bottom-up approach to the rational design of new bioluminescence emitters

Lead Research Organisation: University College London
Department Name: Chemistry

Abstract

This research will improve our molecular level understanding of bioluminescence for the rational design of new near-infrared emitters for advanced bioluminescence imaging applications.

Bioluminescence is the emission of light by living organisms. It is one of Nature's most spectacular phenomena and continues to challenge those who try to understand it. The yellow-green glow of fireflies is one of the brightest and most beautiful examples of bioluminescence. The biochemical process involves the catalytic oxidation of a small molecule (luciferin) by an enzyme (luciferase) to form an electronically excited oxyluciferin that subsequently relaxes to its ground state by emitting light.

Harnessing bioluminescence for imaging applications has revolutionised the biosciences. Bioluminescence imaging is now a standard tool for visualising molecular and cellular processes in vivo. However, more advanced applications are limited by reduced sensitivity in deep tissue arising from the absorption of visible light by blood and tissue. New far-red and near-infrared bioluminescence systems for enhanced sensitivity and resolution in deep tissue have recently become available; however, they are limited by their brightness and narrow spectral range. There is a pressing need for bright, multicolor, far-red and near-infrared emitters.

To date, modifications to bioluminescent systems have relied on incremental changes and small library-based approaches. We propose to use a fundamentally new, bottom-up approach. We will use state-of-the-art spectroscopy measurements and quantum chemistry calculations to learn which electronic states and molecular motions of far-red and near-infrared luciferins are important in the competing non-radiative relaxation pathways that reduce the brightness of bioluminescence and we will learn how luciferase enzymes tune the bioluminescence wavelength. We will then use this information to design new, bright bioluminescent emitters for multicolour, far-red and near-infrared bioluminescence imaging.

Planned Impact

This project and its results will transform our molecular level understanding of the relationship between chemical structure and bioluminescence, which will provide us with the capability to develop the tools required for new imaging and biotechnology applications to explore new aspects of biology and medicine. It will also advance our general understanding of the role of complex environments on the electronic structure and relaxation dynamics of photoactive molecules, which will provide important information for the rational design of a wide range of new photoactive materials by scientists around the world in industry and academia. Photoactive molecules are involved in a range of emerging technologies, such as solar energy and information technology, and the results from our increased understanding will thus have potential widespread impact. The best of the far-red and near-infrared bioluminescent systems characterised will be developed into new noninvasive diagnostic tools for the health and well-being of society. Ultimately, these will be commercialised and lead to new jobs and wealth creation.

The research personnel working on the project will develop into multidisciplinary scientists capable of solving future emerging problems through the use and development of chemistry. They will not only learn state-of-the-art techniques in spectroscopy, computer simulation and molecular synthesis, but they will learn how to work in an interdisciplinary project that requires good communication between the different parts to ensure the success of the project. The new knowledge and techniques developed in the project will have impact across chemistry, as outlined in the beneficiaries section, helping to keep the research base of the UK at the forefront of international research.

To bring the work to the wider public, the link between the timeless beauty of the firefly and the non-invasive lighting up of biological function will be presented at public events. This provides an obvious focus to explain the delicate balance of how molecules and light interact, and how this can be used to benefit society.

Publications

10 25 50
 
Description We have developed a procedure for retrieving true UV photoelectron spectra from measured UV liquid-jet photoelectron spectra.
Exploitation Route The software is being developed further and will eventually be made available to the academic community.
Sectors Other

 
Title Retrieval of true ultraviolet photoelectron spectra of aqueous solutions 
Description Combination of Monte Carlo simulations and spectral retrieval to convert UV photoelectron spectra of liquids to true spectra that are no longer distorted by the effect of inelastic scattering. 
Type Of Material Data analysis technique 
Year Produced 2022 
Provided To Others? Yes  
Impact It has led us to collaborate with Dr Iain Wilkinson in Berlin, Professor Ruth Signorell in Zurich, and to us further developing this software. 
 
Title Spectral retrieval software 
Description It will be available shortly as open source software. It allows the retrieval of true photoelectron spectra from measured UV photoelectron spectra of liquids. 
Type Of Technology Software 
Year Produced 2022 
Impact Further publications. 
 
Description CDT in Quantum Technologies, Career in academia workshop 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Postgraduate students
Results and Impact The talk was about my career timeline, from degree to current position, alongside family life.
Year(s) Of Engagement Activity 2023
 
Description London institute for advanced light technologies, International Day of Light public science lecture 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact The event brought art and science together, and there was a general discussion about light and form.
Year(s) Of Engagement Activity 2022
 
Description RESOLV International Day of Women in Science event, Bochum, Germany 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact The aim of the event was to highlight women scientists careers in academia.
Year(s) Of Engagement Activity 2024
 
Description Schools lecture for year 11 students, James Allen's Girls' School 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact A lunchtime talk about how my A-levels led to a career as a university scientist combined with a family. Followed by a science demonstration lecture, "shining light on molecules". The talks were for years 10-13.
Year(s) Of Engagement Activity 2024
 
Description UCL Chemical Engineering Athena SWAN PhD-PDRA-academic progression workshop 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Postgraduate students
Results and Impact 20-30 PhD students attended the workshop, which sparked discussions about academic careers
Year(s) Of Engagement Activity 2019