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Spins and superconducting circuits for advanced spectroscopy (SpinSUPER)

Lead Research Organisation: Imperial College London
Department Name: Chemistry

Abstract

Magnetic resonance is one of the most well established and widely used tools for studying molecules and materials in science, medicine and metrology: from magnetic resonance imaging (MRI) in hospitals, to bench-top instruments used for industrial quality assurance monitoring, to advanced spectroscopy used to push the boundaries of understanding in many fields in science. The most common magnetic resonance technique addresses the nuclei that are found in all atoms; a related and very important variant is electron spin resonance (ESR), which addresses unpaired electrons found in large number of molecules and materials. In recent years, ESR spectroscopy has contributed, for instance, to the discovery of a room-temperature diamond MASER and long-wavelength photosynthesis, as well as studies of primitive organic matter in extra-terrestrial rocks or evaluating materials for quantum technologies. Electron spins are naturally found in many biological systems, such as on metal centres that are found within mechanistically key locations in enzymes, but can also be introduced to targeted locations in molecules using spin-labels.

Despite these successful and wide-ranging uses, the sensitivity of ESR is a critical bottleneck for many important applications. For example, the limited sensitivity may require long signal averaging times (several days) to obtain statistically meaningful data - in many applications, this makes certain studies impractical, or else highly limited in scope. Recent developments, in many cases influenced by advances in superconducting quantum technologies, have shown that under very specific conditions, large improvements in ESR sensitivity are possible, harnessing new types of microwave amplifier and ESR resonator. Our goal is to take inspiration from such results and develop them in a more general manner that can be applied to practical open questions. In this manner, we will be able to deliver advances in the specific systems studied in this proposal, as well as show the wider ESR community how such techniques can be broadly applied in practice. As an illustration, we have recently shown in a collaborative work how cryogenic amplifiers can be introduced into the ESR detection circuit to enhance the signal to noise ratio, reducing the measurement time by almost a factor of 100, compared to typical set-ups.

In this project, we will develop new technologies and methods to enhance the sensitivity in ESR and open up entirely new ways of performing ESR measurements. We will apply these to a number of important systems, including (1) Respiratory complex I, an essential enzyme that contributes approximately 40% to ATP synthesis and whose dysfunction is associated with numerous disorders and with ageing but whose energy-coupling mechanism, which involves radicals, is yet unclear; (2) Photosynthetic complex I, an enzyme that can lead to increased ATP production and is hence of interest for agriculture e.g. to increase crop yields, but whose mechanism - which involves numerous paramagnetic intermediates - is poorly understood; (3) Two enzymes essential for biological methane production; (4) Near-surface spins in materials that are being studied for applications in quantum technologies.

SpinSUPER combines the complementary expertise in the groups of Roessler (Imperial) on the manipulation of complex proteins with multiple redox-active centres to investigate their mechanisms through the application of pulse ESR techniques, and that of Morton (UCL) on superconducting micro-resonators, micro-resonator design and modelling, and novel microwave circuits for enhanced ESR. It promises to redefine the state-of-the-art in ESR instrumentation and methodology, with a focus on practical spin systems. SpinSUPER will push new frontiers for ESR, for example with ESR at the single-cell level, or simultaneous multi-frequency ESR, while being firmly targeted at addressing open scientific questions in the field of ESR.

Publications

10 25 50
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Eisermann J (2024) The Effect of Reactive Oxygen Species on Respiratory Complex I Activity in Liposomes. in Chemistry (Weinheim an der Bergstrasse, Germany)

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Kalendra V (2023) Q-band EPR cryoprobe. in Journal of magnetic resonance (San Diego, Calif. : 1997)

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Kalendra V (2023) X- and Q-band EPR with cryogenic amplifiers independent of sample temperature. in Journal of magnetic resonance (San Diego, Calif. : 1997)

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Perez-Jimenez M (2024) A Paramagnetic Nickel-Zinc Hydride Complex. in Angewandte Chemie (International ed. in English)

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Tarvydyte U (2025) Pushing the sensitivity boundaries of X-band EPR cryoprobe using a fast microwave switch in Journal of Magnetic Resonance Open

 
Title Back Cover: Film-electrochemical EPR spectroscopy to investigate electron transfer in membrane proteins in their native environment 
Description Back cover of the 87/2024 issue of Chemical Communications highlighting the published work on "Film-electrochemical EPR spectroscopy to investigate electron transfer in membrane proteins in their native environment". 
Type Of Art Artwork 
Year Produced 2024 
Impact Increased visibility of the related scientific publication (DOI: 10.1039/D4CC04013A). 
URL https://pubs.rsc.org/en/content/articlelanding/2024/cc/d4cc90381a
 
Title Cover Feature: The Effect of Reactive Oxygen Species on Respiratory Complex I Activity in Liposomes 
Description Cover feature of the 55/2024 issue of Chemistry - A European Journal highlighting the published work on "The Effect of Reactive Oxygen Species on Respiratory Complex I Activity in Liposomes". 
Type Of Art Artwork 
Year Produced 2024 
Impact Increased visibility of the related scientific publication (DOI: 10.1002/chem.202402035). 
URL https://chemistry-europe.onlinelibrary.wiley.com/doi/full/10.1002/chem.202485504
 
Description Magnetic resonance is one of the most well established and widely used tools for studying molecules and materials in science, medicine and metrology: from magnetic resonance imaging (MRI) in hospitals, to bench-top instruments used for industrial quality assurance monitoring, to advanced spectroscopy used to push the boundaries of understanding in many fields in science. Electron spin resonance (ESR), which addresses unpaired electrons found in a large number of molecules and materials, has contributed to the discovery of a room-temperature diamond MASER and long-wavelength photosynthesis, as well as studies of primitive organic matter in extra-terrestrial rocks or evaluating materials for quantum technologies. Electron spins are naturally found in many inorganic materials and biological systems, such as on metal centres that are found within mechanistically key locations in enzymes, heterogenous catalysts and ceramics. However, the sensitivity of ESR is a critical bottleneck for many important applications. For example, the limited sensitivity may require long signal averaging times (several days) to obtain statistically meaningful data on dilute solution of biomolecules. Additionally, thin films of technologically relevant materials containing low numbers of paramagnetic centres must be stacked/packed into the EPR resonator cavity in order to boost signal-to-noise ratios above the limit of detection. The latter point currently blocks EPR spectroscopy from being interfaced with quantum technologies and devices in an operando fashion, despite the fact that the technique is perfectly suited to their investigation.
Recent developments, influenced by advances in superconducting quantum technologies, have shown that under very specific conditions, large improvements in ESR sensitivity are possible. Our primary goal is to harness these technologies and develop them in a more general manner that can be applied to practical open questions. In this regard, we have combined cryogenic amplifiers (already reducing data acquisition times by a factor of 100) with superconducting ESR microresonators, which theoretically increase limits of detection by up to four orders of magnitude compared to typical set-ups. Recently, our set-up has been applied to thin (50 nm) films of paramagnetic copper phthalocyanine hosted in diamagnetic matrices, serving as a model system for quantum technologies/devices. Here we were able to detect an unprecedentedly low number of electron spins within a single-substrate, single-film sample. By comparison, this film was completely undetectable via commercially available, state-of-the-art EPR spectrometers. This result demonstrates early success in meeting the main objectives outlined above, while also offering a promising outlook for the future of both the development of our methodology/technology and application of it to contemporary devices/operando studies.
As an extension of our work on thin films of inorganic materials, we have incorporated model metalloenzymes into sugar host matrices and deposited them as thin films (~1 micrometer) on the superconducting microresonator surface. Not only were we able to match the performance of commercial spectrometers on conventional solution-based samples, but we have also demonstrated how our methodology can be extended to quantities of metalloenzyme that fall well below the limits of detection of those commercial set-ups. This result naturally serves as a proxy for the investigation of bio-hybrid devices where catalytic biological centres may be present at extremely low loadings, excluding them from in situ or operando studies via EPR spectroscopy.
Exploitation Route Ultimately, our goal is to make our microresonators and approach available to scientists around the world, to open up the possibility of investigating unpaired electrons in a variety of systems (from quantum application to medicine) that have evaded detection so far (e.g. in monolayers in materials, in whole cells, etc.) - using tiny sample quantities. The approaches we develop (once published) will no doubt be taken forward by other EPR spectroscopists, raising the impact of what will become possible even further.
Sectors Chemicals

Energy

Environment

Manufacturing

including Industrial Biotechology

Pharmaceuticals and Medical Biotechnology

 
Description Centre for Quantum Engineering, Science and Technology (QuEST) Postdoc Seed Funding
Amount £1,635 (GBP)
Organisation Imperial College London 
Sector Academic/University
Country United Kingdom
Start 02/2024 
End 05/2024
 
Description QuEST Postdoc Seed Funding
Amount £1,598 (GBP)
Organisation Imperial College London 
Sector Academic/University
Country United Kingdom
Start 02/2024 
End 07/2024
 
Description Royal Society of Chemistry Researcher Development and Travel Grant
Amount £500 (GBP)
Funding ID D24-2814598374 
Organisation Imperial College London 
Sector Academic/University
Country United Kingdom
Start 07/2024 
End 08/2024
 
Title High Temperature Superconducting ESR Microresonators 
Description High temperature superconducting ESR microresonators have been implemented in new pulse ESR methodology that enables the detection of paramagnetic redox centres (Fe, Cu) in redox enzymes when incorporated into thin films at very low total spin numbers. The use of high temperature superconducting materials ensures that a broad range of paramagnetic centres, including radicals, slow-relaxing and fast-relaxing transition metal ions, can be investigated via puled ESR spectroscopy within a single experimental set-up. 
Type Of Material Biological samples 
Year Produced 2023 
Provided To Others? No  
Impact We are currently pushing the limits of detection in the context of pulse ESR spectrosocpy on metalloenzymes. Our current benchmark sensitivity for Cu-based systems is superior to that of commercially available spectrometers, and has the added advantage of containing undetectable levels of background signals. 
 
Title Thin sugar-protein film desposition on superconducting ESR microresonators 
Description We are developing methods to deposit thin films of protein-containing sugars at the micrometer scale directly at the surface of superconducting ESR microresonators via spin-coating. This method greatly enhances the sensitivity of our EPR spectroscopic techniques and preserves protein structure. 
Type Of Material Biological samples 
Year Produced 2024 
Provided To Others? No  
Impact We have found that this method is applicable to a wide range of proteins, including large air-sensitive redox-active enzymes such as mitochondrial respiratory complex I. Implementing this method in EPR spectroscopic investigations has improved sensitivity gains, ease of sample preparation and reproducibility. 
 
Title Pulse EPR data from 50 nm thick 0.1% copper phthalocyanine films grown on superconducting ESR microresonators 
Description This dataset contains a comprehensive pulse EPR characterisation of a single superconducting ESR microresonator of 300 nanometer thickness and 400 micrometer diameter hosting a thin 50 nm film of 0.1% copper phthalocyanine grown directly at the surface. 
Type Of Material Database/Collection of data 
Year Produced 2024 
Provided To Others? No  
Impact This resaerch dataset shows conclusively that the spectrocopic characteristion of single substrates hosting such thin films with extremely dilute paramagnetic centres can be achieved with pulse EPR via superconducting microresonators, where commercial EPR resonators and other materials characterisation techniques (e.g. X-ray photoelectron spectroscopy) do not have sufficient sensitivity. Furthermore, this dataset demonstrates a new application of pulse EPR as a materials characterisation technique without the requirement of boosting signal-to-noise ratio via "stacking" multiple substrates into custom-made or modified sample spaces/environments/cavities. 
 
Description Collaboration with Jarryd Pla (UNSW) 
Organisation University of New South Wales
Country Australia 
Sector Academic/University 
PI Contribution Expertise in microresonators and mK ESR
Collaborator Contribution Expertise and devices for squeezing of microwave field
Impact None yet - research collaboration initiated. Goal is to enhance ESR sensitivity using microwave squeezing by a practically useful factor
Start Year 2025
 
Description Collaboration with Prof. Filip Meysman 
Organisation University of Antwerp
Country Belgium 
Sector Academic/University 
PI Contribution We have using our novel high-sensitivity microresonators to investigate how cable bacteria (Meysman group) conduct electricity so effectively. Because these cable bacteria are extremely difficult to isolate, our novel set-up that allows the study of very tiny samples could be ground breaking.
Collaborator Contribution The group provides us with the samples (cable bacteria). The samples made by Prof. Meysman are extremely precious because they are difficult to make - taking an experience PhD student at least 6 months.
Impact This is a multidisciplinary collaboration: chemistry (my group), physics and materials (group of Co-I Prof. John Morton), biology (Prof. Meysman). The outcome that has arisen so far is that we were able to detect radicals in cable bacteria that we were able to attribute to sulfur-centred radicals. The publication, led by Prof. Meysman, is currently under review.
Start Year 2023
 
Description Collaboration with Professor Sandrine Heutz 
Organisation Imperial College London
Department Department of Materials
Country United Kingdom 
Sector Academic/University 
PI Contribution Our team's role in this collaboration ranges from conceptualisation of research ideas to access to our state of the art pulse EPR spectrometer and home-built superconducting microresonators.
Collaborator Contribution Professor Heutz and her group contribute extensive knowledge on the applications and fabrication of spintronics, including access to vapour deposition instrumentation.
Impact Currently there are no outputs from this collaboration.
Start Year 2024
 
Description Mantas Simenas 
Organisation Vilnius University
Country Lithuania 
Sector Academic/University 
PI Contribution Collaborations on micro-resonators and enhanced sensitivity ESR
Collaborator Contribution Collaborations on micro-resonators and enhanced sensitivity ESR
Impact Several (3) joint publications in Journal of Magnetic Resonance, and one in Nature Communications.
Start Year 2023
 
Title PROBEHEAD INSERT FOR EPR APPARATUS 
Description An insert for an EPR probehead is disclosed. The insert comprises a directional coupler and an amplifier. The directional coupler receives microwave power from a source at a first port and transfers a portion of the received microwave power to a second port for transmission to a sample space. The directional coupler is also arranged to receive a microwave signal from the sample space at the second port and to pass the majority of the received microwave signal to a third port. The amplifier has an input and an output; the input is arranged to receive the microwave signal from the third port of the directional coupler and to produce an amplified version of the received microwave signal at the output for transmission to a detector. 
IP Reference WO2022038340 
Protection Patent / Patent application
Year Protection Granted 2022
Licensed Yes
Impact Licensed to start-up producing enhanced probes for the scientific community
 
Description COST action workshop "FeS Clusters from Chemistry to Biology and Beyond" 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact EPR spectroscopy was unknown to most of this audience and the workshop informed of the capabilities of this technique.
Year(s) Of Engagement Activity 2023
URL https://www.fesimmchemnet-cost.com/
 
Description EPR Spectroscopy Training School at Imperial College London 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact The EPR Spectrosocpy Training School, hosted by the Centre for Pulse EPR at Imperial College London, was held in September 2024 for postgraduate students and postodoctoral researchers of various experience levels who wanted to learn more about EPR spectroscopy. The School combined practical and theoretical classes, covering a range of topics, including how to use the EPR spectrometers and their softwares, data processing and also data simulation. The main goal of the School was to build the confidence of the attendees to do EPR measurements, employ them in their research and spark new research avenues and/or collaborations. The 12 attendees left the School having demonstrated a clear leap in ability in all aspects relating to EPR spectroscopy and engaged in deep conversations with the staff running the school after each of the sessions. The feedback from the attendees was overall extremely positive and has encouraged the organisers to host another event in the future.
Year(s) Of Engagement Activity 2024
 
Description Spins in Lyon 2023 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Workshop presentation at "Spins in Lyon" workshop on the topic of spins and superconducting circuits, in December 2023
Year(s) Of Engagement Activity 2023
 
Description Talk at Spins in Okinawa 2024 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Scientific talk at an international workshop in Japan (Okinawa)
Year(s) Of Engagement Activity 2024