Membrane remodelling during cell division in the thermoacidiophilic archaeaon Sulfolobus acidocaldarius
Lead Research Organisation:
MRC Laboratory of Molecular Biology
Department Name: Cell Biology
Abstract
At division, the cellular membrane undergoes rapid and large-scale changes in shape and lipid composition. While these changes have been characterised in a number of eukaryotes and bacteria, almost nothing is known about the role of the membrane in archaeal cell division. Archaeal lipids are chemically distinct and membranes play an especially critical, structural role for archaeal cells that lack a cell wall. This is the case for Sulfolobus acidocaldarius, a model thermoacidophilic archaeon that is currently the closest experimentally tractable relative of eukaryotes. While cell division in Sulfolobus is driven by the activity of ESCRTIII and Vps4 - homologues of the proteins catalysing abscission in many eukaryotes - the lipid membrane that ESCRTIII remodels in Sulfolobus has a unique chemistry and organisation. Distinct from bacterial or eukaryotic lipids, archaeal lipids can span the membrane to create an effective monolayer. Using a combination of high temperature live-cell imaging, lipidomics and structural studies, I aim to determine the properties of the archaeal lipid membrane that are necessary to support ESCRTIII function in archaeal cell division. To do so I will: 1) create new tools for visualising membrane dynamics in archaea using both commercially available and newly synthesised lipid probes in live cell microscopy; 2) identify the spatial and temporal control of lipids and membrane properties during cell division using a combination of lipidomics, proteomics and microscopy; 3) characterise how ESCRTIII interacts with the archaeal membrane using structural techniques and in silico modelling. Through understanding of how conserved proteins can act on such different membrane architectures we hope to shed some light on fundamental principles of cell division as well as the evolution of the comparatively more complex division machinery of eukaryotes.
Organisations
- MRC Laboratory of Molecular Biology (Lead Research Organisation)
- Medical Research Council (MRC) (Collaboration)
- Brandeis University (Collaboration)
- Massachusetts Institute of Technology (Collaboration)
- Philipp University of Marburg (Collaboration)
- Albert Ludwig University of Freiburg (Collaboration)
- Dutch Research Council (Collaboration)
People |
ORCID iD |
Buzz Baum (Principal Investigator) | |
Alice Dimitra Cezanne (Fellow) |
Publications

Cezanne A
(2023)
Probing archaeal cell biology: exploring the use of dyes in the imaging of Sulfolobus cells
in Frontiers in Microbiology
Description | Alice published a paper describing the use of fluorescent probes for living imaging archaea and Sulfolobales at 75°C |
Exploitation Route | We published the methods so that others in the archaeal community can use them |
Sectors | Education Other |
Description | Alice's work is still underway. However, she has made a number of important findings that we hope to bring together into one or more papers in the coming year. In addition, she has done much to advance the technology we use to image and analyse archaeal cells as they grow and divide. Her achievements thus far include: i) improvements to our microscope set-up (a SoRa spinning disk). ii) the development of better propbes for imaging the Sulfolobus membrane iii) lipidomics across the cycle and in various perturbed conditions iv) the phenotypic analysis of mutants and small molecules that interfere with cell shape and division in Sulfolobus. v) the development of an image analysis pipeline to analyse live imaging data (cell segmentation, tracking and morphometry) |
First Year Of Impact | 2023 |
Sector | Education |
Impact Types | Societal |
Description | Membrane remodelling during cell division in the thermoacidiophilic archaeaon Sulfolobus acidocaldarius |
Amount | € 141,000 (EUR) |
Funding ID | ALTF_1041-2021 |
Organisation | European Molecular Biology Organisation |
Sector | Charity/Non Profit |
Country | Germany |
Start | 01/2022 |
End | 12/2023 |
Title | Improved Sulfoscope by addition of SoRa and the development of new dyes for live imaging |
Description | We improved the Sulfoscope for archaeal live cell imaging |
Type Of Material | Technology assay or reagent |
Year Produced | 2021 |
Provided To Others? | Yes |
Impact | We have shared the method extensively with the community |
Title | Microfluidic devices for live imaging of archaea over long periods. |
Description | We have developed microfabricated CHIPs with Morgan Delarue for imaging archaea live. We have shown that dyes can be added to label cells. We have redesigned our heated cap so we can image cells in devices without fluorescence. |
Type Of Material | Technology assay or reagent |
Year Produced | 2024 |
Provided To Others? | No |
Impact | This will allow longterm imaging of archaea |
Description | Analysis of transmembrane proteins across the archaea |
Organisation | Dutch Research Council |
Department | Royal Netherlands Institute for Sea Research |
Country | Netherlands |
Sector | Academic/University |
PI Contribution | We have been working with Josh Hamm (NIOZ) and Juan Pierella Karlusich (Harvard) to determine complete set of archaeal TM proteins |
Collaborator Contribution | We are advising. |
Impact | None yet... |
Start Year | 2022 |
Description | Analysis of transmembrane proteins across the archaea |
Organisation | Massachusetts Institute of Technology |
Country | United States |
Sector | Academic/University |
PI Contribution | We have been working with Josh Hamm (NIOZ) and Juan Pierella Karlusich (Harvard) to determine complete set of archaeal TM proteins |
Collaborator Contribution | We are advising. |
Impact | None yet... |
Start Year | 2022 |
Description | Archaeal cell-cell interactions and their role in the emergence of eukaryotes |
Organisation | Brandeis University |
Country | United States |
Sector | Academic/University |
PI Contribution | We have come together to use archaea as a model of eukaryogenesis |
Collaborator Contribution | We co-wrote a grant that I lead |
Impact | We have published a number of papers that have benefited from the work of the team. We have also had a number of lab exchanges through this newwork. |
Start Year | 2019 |
Description | Archaeal cell-cell interactions and their role in the emergence of eukaryotes |
Organisation | Dutch Research Council |
Department | Royal Netherlands Institute for Sea Research |
Country | Netherlands |
Sector | Academic/University |
PI Contribution | We have come together to use archaea as a model of eukaryogenesis |
Collaborator Contribution | We co-wrote a grant that I lead |
Impact | We have published a number of papers that have benefited from the work of the team. We have also had a number of lab exchanges through this newwork. |
Start Year | 2019 |
Description | Gordon and Betty Moore Foundation grant to study symbiosis |
Organisation | Dutch Research Council |
Department | Royal Netherlands Institute for Sea Research |
Country | Netherlands |
Sector | Academic/University |
PI Contribution | We were awarded a grant as part of the Symbiosis in Aquatic Systems Initiative. |
Collaborator Contribution | the collaboration is led by Anja Spang, it includes Dina Grohmann, Harald Huber and Laura Villanueva |
Impact | We are starting to share ideas and resources |
Start Year | 2020 |
Description | Laura Villanueva |
Organisation | Dutch Research Council |
Department | Royal Netherlands Institute for Sea Research |
Country | Netherlands |
Sector | Academic/University |
PI Contribution | We have a joint Simons Moore foundation grant together. We also hosted Kerstin Fiege from Laura's team at the LMB |
Collaborator Contribution | Laura's team are helping us with archaeal lipidomics. |
Impact | We have lipidomic data for Alice's work in the lab. Kerstin made progress with the cell biological of her symbiosis. |
Start Year | 2022 |
Description | Lipid extraction from Sulfolbus with Sonja Albers |
Organisation | Albert Ludwig University of Freiburg |
Country | Germany |
Sector | Academic/University |
PI Contribution | We have a joint VW grant with Sonja Albers. |
Collaborator Contribution | As part of this, Alice received lipids and a protocol from the Albers lab. |
Impact | We have yet to make use of the lipid fractions. We may have to repeat the extraction. |
Start Year | 2021 |
Description | VW Life? |
Organisation | Albert Ludwig University of Freiburg |
Department | Centre for Biological Signalling Studies (BIOSS) |
Country | Germany |
Sector | Academic/University |
PI Contribution | We were awarded a VW Life? award. Towards this we contributed to writing of the grant and preliminary data. |
Collaborator Contribution | the grant is led by Sonja-Verena Albers, and the team includes Jan Löwe, Lars-Oliver Essen and Andela Saric |
Impact | We are due for our last meeting in Austria this May. This will be a chance to review the ongoing work we are doing together. We expect to continue collaborating with Sonja Albers, Andela Saric and Jan Lowe. |
Start Year | 2019 |
Description | VW Life? |
Organisation | Medical Research Council (MRC) |
Department | MRC Laboratory of Molecular Biology (LMB) |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | We were awarded a VW Life? award. Towards this we contributed to writing of the grant and preliminary data. |
Collaborator Contribution | the grant is led by Sonja-Verena Albers, and the team includes Jan Löwe, Lars-Oliver Essen and Andela Saric |
Impact | We are due for our last meeting in Austria this May. This will be a chance to review the ongoing work we are doing together. We expect to continue collaborating with Sonja Albers, Andela Saric and Jan Lowe. |
Start Year | 2019 |
Description | VW Life? |
Organisation | Philipp University of Marburg |
Country | Germany |
Sector | Academic/University |
PI Contribution | We were awarded a VW Life? award. Towards this we contributed to writing of the grant and preliminary data. |
Collaborator Contribution | the grant is led by Sonja-Verena Albers, and the team includes Jan Löwe, Lars-Oliver Essen and Andela Saric |
Impact | We are due for our last meeting in Austria this May. This will be a chance to review the ongoing work we are doing together. We expect to continue collaborating with Sonja Albers, Andela Saric and Jan Lowe. |
Start Year | 2019 |
Description | Visited NIOZ and collected samples in the field |
Organisation | Dutch Research Council |
Department | Royal Netherlands Institute for Sea Research |
Country | Netherlands |
Sector | Academic/University |
PI Contribution | Alice Cezanne and I came to NIOZ for a joint meeting. We spent a day collecting anaerobic archaeal samples from a site near the sea with Josh Hamm |
Collaborator Contribution | Alice Cezanne and I came to NIOZ for a joint meeting. We spent a day collecting anaerobic archaeal samples from a site near the sea with Josh Hamm |
Impact | There are some cells in a flask at NIOZ. We hope they will grow up. We are also planning the next visit of Florian Mayer to the LMB in Cambridge. |
Start Year | 2023 |
Description | Alice presented her work to School Children from Cambridgeshire |
Form Of Engagement Activity | Participation in an open day or visit at my research institution |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Schools |
Results and Impact | Alice presented a picture of life in the lab to local school kids as part of the LMB enegagement activities |
Year(s) Of Engagement Activity | 2022,2023,2024 |
Description | Archaea.bio |
Form Of Engagement Activity | Engagement focused website, blog or social media channel |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Alice has been instrumental in setting up a website for the archaeal community which enables sharing of data and ESCPECIALLY of protocols. |
Year(s) Of Engagement Activity | 2023,2024 |
Description | GRC archaeal meeting - talk |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Alice presented her latest data to the community |
Year(s) Of Engagement Activity | 2023 |
Description | Talk MPI Tubingen |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | I was invited to visit the MPI in Tubingen as a guest speaker. |
Year(s) Of Engagement Activity | 2023 |
Description | Talk Munich |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | I was an invited speaker at LMU Munich |
Year(s) Of Engagement Activity | 2023 |
Description | Talk at Basel Biozentrum |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | I was an invited speaker at Biozentrum |
Year(s) Of Engagement Activity | 2023 |