PlastiRootS - Evaluation of complex Root traits towards PLASTIcity in barley under Salt stress for improving climate resilience and productivity
Lead Research Organisation:
Aberystwyth University
Department Name: IBERS
Abstract
Abiotic stresses constitute a significant threat to global crop production, and this problem is likely to be exacerbated in the future due to climate change. Soil salinity affects more than 60 million hectares of irrigated land, and continuously increasing day by day.
Worldwide crop production must be doubled by 2050 to feed the increasing population, estimated to be 9 billion. Although significant progress has been made in crop improvement, most efforts have targeted above-ground traits in plants. Roots are essential for plant adaptation and productivity but are significantly less studied due to technical difficulties. Barley is the fourth most important cereal crop worldwide. To date, most of the research focused on improving the malt quality of barley. However, it is also necessary to assemble new cultivars with increased adaptation to abiotic stresses to ascertain Climate-Smart Agriculture. PlastiRootS focuses on deciphering the natural variation of root plasticity under salinity stress in barley germplasm via advanced non-destructive root phenotyping techniques networked with fatty acid profiling. Additionally, PlastiRootS aims to identify key genes responsible for
the modulation of root plasticity under salinity stress by a genome-wide association study. Further, the multiplexed CRISPR gene editing system for functional validation of candidate genes in barley will be utilised to reveal the adaptive response of root traits to salt stress. The PlastiRootS offers an unprecedented opportunity for addressing novel aspects in root biology and will provide a foundation for future breeding efforts toward superior root traits against salinity stress tolerance in barley. This project will contribute to the UNSDGs and inclusive green economy strategies to produce more food with fewer resources, achieve food security, promote sustainable agriculture, and economic opportunity through agriculture and combat climate change and its impact.
Worldwide crop production must be doubled by 2050 to feed the increasing population, estimated to be 9 billion. Although significant progress has been made in crop improvement, most efforts have targeted above-ground traits in plants. Roots are essential for plant adaptation and productivity but are significantly less studied due to technical difficulties. Barley is the fourth most important cereal crop worldwide. To date, most of the research focused on improving the malt quality of barley. However, it is also necessary to assemble new cultivars with increased adaptation to abiotic stresses to ascertain Climate-Smart Agriculture. PlastiRootS focuses on deciphering the natural variation of root plasticity under salinity stress in barley germplasm via advanced non-destructive root phenotyping techniques networked with fatty acid profiling. Additionally, PlastiRootS aims to identify key genes responsible for
the modulation of root plasticity under salinity stress by a genome-wide association study. Further, the multiplexed CRISPR gene editing system for functional validation of candidate genes in barley will be utilised to reveal the adaptive response of root traits to salt stress. The PlastiRootS offers an unprecedented opportunity for addressing novel aspects in root biology and will provide a foundation for future breeding efforts toward superior root traits against salinity stress tolerance in barley. This project will contribute to the UNSDGs and inclusive green economy strategies to produce more food with fewer resources, achieve food security, promote sustainable agriculture, and economic opportunity through agriculture and combat climate change and its impact.
Publications
Freeland L
(2024)
Precision Breeding and Consumer Safety: A Review of Regulations for UK Markets
in Agriculture
Kaptan G
(2024)
Using Citizen Science to Explore Plant Breeding and Investigate Food-Chain Transparency for Novel Breeding Methods
in FSA Research and Evidence
Patel J
(2024)
Modulation of physio-biochemical and photosynthesis parameters by overexpressing SbPIP2 gene improved abiotic stress tolerance of transgenic tobacco.
in Physiologia plantarum
| Description | Meeting with Welsh Government and Welsh FSA representatives to discuss implications for Wales of the changes in GMO legislation for England. Rhodfa Padarn, Llanbadarn Fawr, Aberystwyth SY23 3UR. 21st Feb 2025. |
| Geographic Reach | National |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Finding QTLS related to root plasticity in Barley population |
| Organisation | James Hutton Institute |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | At Aberystwyth university, we are collecting root phenotyping data. |
| Collaborator Contribution | Our partner in James Hutton Institute have genotype data for barley population. |
| Impact | Under process |
| Start Year | 2024 |
| Description | Lipid profiling of Barley roots under salt stress. |
| Organisation | Rothamsted Research |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | We are in process of generating lipid profile in Barley |
| Collaborator Contribution | Our partner helping in data mining of lipid profile in Barley |
| Impact | Its under progress |
| Start Year | 2024 |
| Description | Use of gene editing Eruca sativa for more effective biofumigation. FoodBioSystems DTP |
| Organisation | University of Reading |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | The student is working under the supervision of Dr D Phillips and Prof Huw Jones to develop and apply gene editing and gene silencing methodologies in Eruca sativa. |
| Collaborator Contribution | Colleagues at Uni of Reading, Dr L Bell and Dr M Chadwick will supervise the analysis of glucosinolate and isothiocyanate content in the wild type and edited crop plants. Also assess biofumigant activity in gene knockouts. |
| Impact | No formal output yet. |
| Start Year | 2024 |
| Description | Interview with science communication blogger |
| Form Of Engagement Activity | Engagement focused website, blog or social media channel |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Postgraduate students |
| Results and Impact | Alongside my husband who is also a postdoctoral research scientist, I (Dr Kusum Khatri) was interviewed by Radka Pittner on Postdoctoral fellowships for her blog site 'All about Projects and Creative Thinking'. |
| Year(s) Of Engagement Activity | 2024 |
| URL | https://www.youtube.com/watch?v=QcZIDJuNDko |
| Description | Invited lecture. Plant biotechnology regulation in Europe'. Bio Turkiye, Biotechnology Ecosystem for a Sustainable Life |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Industry/Business |
| Results and Impact | Invited in person lecture. 'Plant biotechnology regulation in Europe'. Bio Turkiye, Biotechnology Ecosystem for a Sustainable Life. Ottoman Archive Complex, Istanbul. 28 - 30 September 2023 |
| Year(s) Of Engagement Activity | 2023 |
| URL | https://bioturkiye.org/congress/docs/bilimsel-program.pdf?a=9876 |
| Description | Workshop on how plants tackles with abiotic stress- Engaging young mind (undergraduate students) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Undergraduate students |
| Results and Impact | This workshop aims to introduced undergraduate students to the fascinating mechanisms by which plants respond and adapt to abiotic stress, such as drought. Through interactive sessions, demonstrations, and discussions, students gained insights into the physiological and molecular strategies plants employ to survive in challenging environments. The workshop also seeks to spark curiosity and encourage students to consider careers or research in plant sciences, agriculture, and environmental sustainability. |
| Year(s) Of Engagement Activity | 2025 |
