Genetic Engineering of T-cells for Adoptive Immunotherapy of Chronic Lymphocytic Leukemia

Lead Research Organisation: University College London
Department Name: Haematology

Abstract

The immune system is highly effective at removing large-numbers of virally infected cells without damaging normal non-infected tissues, however it often remains unresponsive to cancer cells. In this project, we plan to modify T-cells, a key component of the immune system, so that they kill established cancers. We propose taking normal T-cells from patients with a form of cancer known as chronic lymphocytic leukaemia (CLL), and genetically engineer them in the laboratory so that they kill the leukaemia cells, with a view to ultimately giving them back to the patient as a treatment. This engineering exploits our detailed understanding of how the immune system works. In a sense we will use nature‘s toolkit to create a cancer killing immune response. We will test these T-cells in mice with human leukaemias, to establish safety and effectiveness of this new form of treatment. We plan to use the data amassed from this project to prepare the ground-work for a clinical study in patients with CLL that have failed standard treatment. This work represents the beginning of a new field of therapy, where T-cells can be engineered to specifically remove harmful cell populations without damaging healthy normal tissue

Technical Summary

Administration of tumor-specific T-cells (adoptive immunotherapy) has proven to be an effective cancer treatment but is limited by the difficulty in selecting and expanding tumour-specific T-cells to all but a few malignancies. Genetic modification of T-cells with chimeric T-cell receptors (cTCRs), allows us to graft T-cells with any desired specificity, overcoming this limitation. In fact, cTCRs allow radical avenues of immunotherapy such as the generation of large numbers of T-cells recognizing tissue-specific self antigens. CD19 is a B-cell surface antigen expressed by nearly all B-cells and B-cell malignancies. We have developed a CD19 specific cTCR - we plan to build on this receptor to engineer autologous T-cells into an effectively therapy for Chronic Lymphocytic Leukemia (CLL), a common malignancy which remains predominantly incurable.

To accomplish this, we aim to (1) improve the cTCR itself, (2) to engineer T-cell to release a cytokine payload, (3) to incorporate a suicide gene into the retroviral vector, (4) to test the contribution of these components in an animal model and finally (5) to perform preparatory work for a phase I clinical study. (1) Co-stimulatory signals are essential to induce an effective and lasting immune response but are frequently not supplied by tumour cells. By introducing portions of co-stimulatory molecules into the intracellular portion of cTCRs it is possible to generate cTCRs which transmit co-stimulatory signals. We will generate CD19 specific cTCRs which transmit synergistic CD28 and OX40 co-stimulatory signals in cis. (2) By driving expression of a cytokine from Nuclear Factor of Activated T-cell (NF-AT) response elements in our retroviral vector, we can engineer T-cells to release cytokines upon activation (i.e. at the site of tumour). We plan to use our engineered T-cells to deliver IL-12, a potent activator of both innate and adaptive immunity increasing efficacy without systemic toxicity. (3) To improve safety in clinical studies, a means of removing adoptively transferred T-cells in case of adverse events is desirable. In the same vector, we will co-express a form of capase 9 which can be activated by exposure to an otherwise inert small-molecule chemical inducer of dimerization (CID).

(4) The safety and efficacy of these modifications will be tested sequentially in a suitable animal model, using bioluminescence to track adoptively transferred T-cells in vivo. (5) Finally, we will establish the processes required for large-scale production of clinical grade vector and transduced T-cells under Good Manufacturing Practise conditions.

Scientifically, with this fellowship, we hope test what is required immunologically to target tissue-specific self-antigens in this manner. Medically, this fellowship should form the pre-clinical data for an innovative phase I clinical study.
 
Description ATECT consortium
Amount € 3,000,000 (EUR)
Funding ID Project #602239 
Organisation European Commission 
Department Seventh Framework Programme (FP7)
Sector Public
Country European Union (EU)
Start 12/2013 
End 11/2018
 
Description CBRC/SBRC Collaborative Funding Call
Amount £271,997 (GBP)
Organisation National Institute for Health Research 
Department UCLH/UCL Biomedical Research Centre
Sector Academic/University
Country United Kingdom
Start 01/2009 
End 12/2013
 
Description EU Marie Curie Fellowship
Amount £127,717 (GBP)
Organisation Marie Sklodowska-Curie Actions 
Sector Charity/Non Profit
Country Global
Start 06/2010 
End 11/2011
 
Description GD2 CAR T-cells for Neuroblastoma (NAC) NOte this is milestoned i.e. not all funding at once
Amount £1,200,000 (GBP)
Organisation Cancer Research UK 
Sector Charity/Non Profit
Country United Kingdom
Start 02/2012 
End 01/2016
 
Description Genetically encodable contrast agents for Photoacoustic imaging
Amount £440,000 (GBP)
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 06/2011 
End 06/2014
 
Description Leukaemia Research Clinical Trial Grant
Amount £360,000 (GBP)
Organisation Leukaemia and Lymphoma Research 
Sector Charity/Non Profit
Country United Kingdom
Start 01/2008 
End 12/2011
 
Description Leukaemia Research Project Grant
Amount £193,154 (GBP)
Organisation Leukaemia and Lymphoma Research 
Sector Charity/Non Profit
Country United Kingdom
Start 01/2007 
End 12/2009
 
Description NIHR, Vector Production Costs Grant
Amount £350,000 (GBP)
Organisation National Institute for Health Research 
Sector Public
Country United Kingdom
Start 01/2008 
End 02/2008
 
Description NIHR, new targets FSC029 Anti-Cancer T cells engineered using Boolean logic gates
Amount £44,994 (GBP)
Organisation National Institute for Health Research 
Sector Public
Country United Kingdom
Start 08/2010 
End 08/2011
 
Description Synthetic Biology in T-cells
Amount £420,724 (GBP)
Funding ID BB/J018899/1 
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 07/2012 
End 07/2015
 
Description UCL Fasttrack Application Clinical Research
Amount £44,773 (GBP)
Organisation University College London 
Sector Academic/University
Country United Kingdom
Start 08/2009 
End 08/2010
 
Title Calcineurin Mutants 
Description Retroviral expression plasmids coding for mutant Calcineurins which render cells resistant to immunosuppressive medications Tacrolimus and Ciclosporin. Have been provided to Marcel Van den Brink MSKCCC and submitted to addgene.org 
Type Of Material Technology assay or reagent 
Year Produced 2009 
Provided To Others? Yes  
Impact T-cells can be engineered to be resistant to Tacrolimus and Ciclosporin. This has impact to (1) immunotherapeutic strategies in the face of ongoing immunosuppression (i.e. bone-marrow or solid organ transplant), (2) useful in vivo experimental tool where subsets of T-cells can be selected 
 
Title RQR8 
Description Highly compact epitope based selectable marker and suicide gene for use in engineered T-cell therapy 
Type Of Material Technology assay or reagent 
Provided To Others? No  
Impact This will allow T-cell therapy studies to be safer, easier and cheaper. 
 
Title anti-CD19 Chimeric Antigen Receptors 
Description A family of Chimeric Antigen Receptors which recognized CD19 have been generated. They have been distributed to investigators in Italy, Norway and Germany. 
Type Of Material Technology assay or reagent 
Year Produced 2007 
Provided To Others? Yes  
Impact Chimeric Antigen Receptors are one the basic tools for adoptive immunotherapy with engineered T-cells. CD19 is one the most promising targets. These receptors are useful for this field. 
 
Description Adoptive Immunotherapy of Paediatric Cancer with Engineered T-cells 
Organisation University College London
Department Institute of Child Health
Country United Kingdom 
Sector Academic/University 
PI Contribution We perform molecular cloning, protein engineering and retroviral vector work.
Collaborator Contribution Expertise and reagents.
Impact Publication - PMID: 1882956
Start Year 2006
 
Description Bioluminesce work to track T-cells in vivo 
Organisation Connecticut College
Country United States 
Sector Academic/University 
PI Contribution We worked together to develop optimal luciferases for mammalian cell expression which are red shifted to give best tissue penetration of light for bioluminescence. We are experts at codon optimization and mammalian cell expression vectors while Connecticut College engineered luciferases.
Collaborator Contribution New reagents.
Impact Publication - PMID: 19748472
Start Year 2009
 
Description CD160 targeting with QMUL 
Organisation Queen Mary University of London
Country United Kingdom 
Sector Academic/University 
PI Contribution I have teamed up with Samir Agrewal in QMUL to develop new immunotherapeutics against CLL which target CD160
Collaborator Contribution Them: target validation; Us - expertise in immunotherapy
Impact CRUK Project grant to start next year
Start Year 2013
 
Description Cellectis Therapeutics 
Organisation Cellectis
Country France 
Sector Private 
PI Contribution Industrial collaboration with Cellectis therapeutics. Sponsored research and licensing of our IP
Collaborator Contribution We are working together to make a universal CAR T-cell platform. We are doing some of the pre-clinical work and the study will be on our site (UCLH)
Impact Cellectis and UCL form the core of the FP7 ATECT consortium. We are getting close to implementing a clinical study.
Start Year 2012
 
Description Chimeric Receptor Collaboration with University of Muenster 
Organisation University Children's Hospital Munster
Country Ireland 
Sector Hospitals 
PI Contribution We provide chimeric antigen receptor and retroviral vector constructs. University of Muenster do the cell biology work.
Collaborator Contribution Reagents and expertise.
Impact Two publications so far - PMID: 19638467 and PMID: 19360406
Start Year 2006
 
Description Genetic Reporters for Photoacoustic Imaging 
Organisation University College London
Department Biochemical Engineering
Country United Kingdom 
Sector Academic/University 
PI Contribution Biomedical Engineering at UCL have pioneered a new imaging modality called photoacoustic imaging which uniquely allows imaging of cellular resolution at cm depth. We have worked with these engineers and identified several pigment proteins from coral which when transgenically expressed should allow selective detection of marked cells in vivo.
Collaborator Contribution We have identified pigment proteins which when transgenically expressed can allow selective imaging of marked cells by Photoacoustic Imaging. We worked together to generate considerably preliminary data and have submitted a project grant to the BBSRC.
Impact We have generated considerable preliminary data and have submitted a grant to the BBSRC and just publish our findings soon.
Start Year 2010
 
Description Immunosuppression resistant T-cells 
Organisation University College London
Department Institute of Child Health
Country United Kingdom 
Sector Academic/University 
PI Contribution Working together using our different strengths - my lab working on protein engineering / retroviral vector; ICH lab working on cell biology aspects
Collaborator Contribution Shared PhD student. Complementary research experience.
Impact UCL./UCLH CBRC Grant awarded Publication PMID: 19770360
Start Year 2006
 
Description Stretch Luciferins 
Organisation University College London
Department Department of Chemistry
Country United Kingdom 
Sector Academic/University 
PI Contribution We have generated libraries of Firefly Luciferases to "fit" around novel Luciferin (substrate) generated by organic chemistry in an attempt to generate a very bright but highly red-shifted emission for in vivo imaging.
Collaborator Contribution Preliminary data and project grant to BBSRC
Impact Generated many new compounds and engineered Luciferases and used this preliminary data to submit a project grant to the BBSRC
Start Year 2010
 
Description T-cell Tracking in vivo with PET 
Organisation University College London
Department Department of Chemistry
Country United Kingdom 
Sector Academic/University 
PI Contribution My lab carries out protein engineering work to make molecular pumps to pump novel radiochemicals made by my collaborator. This work is completely complementary.
Collaborator Contribution Providing novel chemical radiotracers
Impact Fasttrack UCL grant worth £45000 with aim to apply for more substantive project grant next year
Start Year 2008
 
Title Pule-Pizzey Synthesis Device 
Description Pule-Pizzey Synthesis Device is a prototype to generate arbitrary DNA polynucleotides at high fidelity. Development has been funded by an innovation grant from the College (UCL Biomedica). Phase I prototype has been constructed. 
Type Products with applications outside of medicine
Current Stage Of Development Initial development
Year Development Stage Completed 2010
Development Status Actively seeking support
Impact Such a device could revolutionize biological research by replacing laborious molecular cloning techniques with the ability to make arbitrary synthetic DNA. 
 
Title RQR8 
Description Compact Sort Suicide gene for T-cell therapy 
Type Therapeutic Intervention - Cellular and gene therapies
Current Stage Of Development Refinement. Clinical
Year Development Stage Completed 2011
Development Status Under active development/distribution
Impact Cheaper safer Cancer gene therapy with T-cells 
 
Description ATTACK-CANCER Meeting 2013 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Type Of Presentation Keynote/Invited Speaker
Geographic Reach International
Primary Audience Other academic audiences (collaborators, peers etc.)
Results and Impact This is *the* T-cell engineering meeting and I was invited to speak once again

Several offers of collaboration
Year(s) Of Engagement Activity 2013
URL http://www.attack-cancer.org/Symposium2/
 
Description British Society of Haematology - invited presentation 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Primary Audience Health professionals
Results and Impact Invited speaker at British Society of Haematology meeting.

Made many contacts to recruit patients to future clinical studies.
Year(s) Of Engagement Activity 2009
 
Description Leukemia Research Fund Open Day 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Primary Audience Public/other audiences
Results and Impact The LLR open day in the Cancer Institute involved members of the public involved in raising funds for this charity visiting the labs, hearing talks and participating in scientific demonstrations

I was encouraged by the positive reception to submit another grant to the LLR
Year(s) Of Engagement Activity 2011
 
Description Sparks Neuroblastoma Family Day 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Primary Audience Participants in your research and patient groups
Results and Impact SPARKS is a children's cancer charity had a family day and invited me to talk about chimeric antigen receptors to treat cancer, in particular, neuroblastoma.

I may be able to secure funding from SPARKS for future clinical studies.
Year(s) Of Engagement Activity 2009