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Capital award for UK DRI at Imperial College London

Lead Research Organisation: Imperial College London
Department Name: UNLISTED

Abstract

Alongside significant co-investment from Imperial College London, the expected outcome of this funding is the concluded refurbishment of a floor in the new Michael Uren with space for 64+ researchers. An interim solution at the Burlington Danes facility at Hammersmith campus is being used before completion of the final location at the Michael Uren, ready for occupancy by September 2019.
Additionally, £1.5m for procurement of capital equipment is being provided to assist the UK DRI in implementing its first scientific programmes (funding provided separately).
Together, the building and equipment will provide the location for, in the initial stages of 5 programmes, and then to grow significantly in number in subsequent years. The UK DRI as a whole will help to cement the UK’s world-leading position by also promoting innovate approaches and forging much closer collaboration and integration of on-going UK research efforts. The new institute has been established to lead the UK’s dementia research effort and forms a core part of achieving the Prime Minister’s Challenge on Dementia 2020.

Technical Summary

The aim of this award is to support Imperial College London with capital investment for setting-up of one of six UK Dementia Research Institute (UK DRI) centres; in particular, the capital required for building, refurbishment and the procurement of equipment.

At present, 5 programmes have been selected planned for the UK DRI at Imperial College London and with scientific and operational leadership provided by its associate director, Professor Paul Matthews. The project at Imperial College London will involve refurbishment of a floor in the new Michael Uren with space for 64+ researchers. An interim solution at the Burlington Danes facility at Hammersmith campus is being used before completion of the final location at the Michael Uren, ready for eventual occupancy by September 2019.

The approach of the institute as a whole, of which the UK DRI at Imperial College London forms a core part, is to amplify and enhance, not replace, current dementia research efforts in the UK. The UK DRI will help to cement the UK’s world-leading position by supplying vital new funding for research, coupled to promoting innovate approaches and forging much closer collaboration and integration of on-going UK research efforts.

There is a gap in our knowledge of how the healthy brain functions and what leads to its degeneration. The UK DRI will fill this crucial gap that exists at the start of the dementia research journey. It will study the healthy brain and neurodegeneration in order to build new knowledge and understanding that will lead to new treatments. It will also proactively connect to existing clinical and population-level dementia initiatives – for example as being undertaken by the MRC Dementias Platform UK and through the NIHR TRC-D – to catalyse a unique national and strategic approach to confronting the dementia challenge.

In particular, the present research at the UK DRI at Imperial College London plans to look at the innovation theme, including: Individual variation in dementia within populations; Metabolic factors, microbiome and role of sleep; Glial-neuronal interactions; Novel bioelectronics technologies to modulate neurons and glia in sleep, neuroprotection and cognition Funding to these science programmes is provided separately.

Publications

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Atchison CJ (2023) Long-term health impacts of COVID-19 among 242,712 adults in England. in Nature communications

 
Title scFlow 
Description Open source pipeline for automated scRNASeq analysis 
Type Of Material Technology assay or reagent 
Year Produced 2021 
Provided To Others? Yes  
Impact Acceleration of analyses 
URL https://nf-co.re/scflow
 
Title Additional file 1 of A comprehensive study of genetic regulation and disease associations of plasma circulatory microRNAs using population-level data 
Description Additional file 1: Table S1. The list of 2,083 miRNAs characterised in this study (including 591 were well-expressed). Table S2. Baseline characteristics of study participants. Table S3. Genome-wide significant miR-eQTLs identified in this study. Table S4. miR-eQTLs explaining high proportion of variation in miRNA level. Table S5. Multi-SNP joint analysis for conditionally independent associations from GCTA-COJO. Table S6. Replicated miR-eQTLs in Nikpay et al. Table S7. Summary of replication of miR-eQTLs. Table S8. List of 4,310 replicated miR-eQTLs. Table S9. Functional annotation of miR-eQTLs. Table S10. List of 22 loci, miRNAs, and corresponding genes, and 19 loci harbored miRNAs with replicated miR-eQTLs across cohorts. Table S11. SNPs in miRNA genes that also affected miRNA levels. Table S12. miR-eQTLs located in the promoter region of miRNAs. Table S13. SNP-based heritability estimates for 2,083 miRNAs. Table S14. Overlap between cis-miR-eQTLs and gene expression QTLs (eQTLs). Table S15. Colocalisation analysis between plasma miRNAs and gene expression in whole blood (eQTLGen) and across tissues (GTEx). Table S16. miRNAs with shared eQTLs with their putative target genes. Table S17. Overlap and colocalisation analysis between cis-miR-eQTLs and pQTLs. Table S18. Overlap between trans-miR-eQTLs and pQTLs. Table S19. Overlap between trans-miR-eQTLs and pQTLs in Olink. Table S20. Overlap of miR-eQTLs, met-QTLs, linear regression, and colocalisation analysis. Table S21. GWAS traits associated with miR-eQTLs. Table S22. Association between miR-eQTLs in locus in chr9:136128546-136296530 and other omics/phenotypes. Table S23. Genetic instruments for miRNAs (FDR<0.1) for PheWAS and MR analysis. Table S24. FDR-significant association for PheWAS using single variant and cis-GRS. Table S25. Cis and extended-GRS for 17 significant associations in MR-PheWAS. Table S26. Full results for cis-MR analyses. Table S27. Full results for extended-MR analyses. Table S28. Full results for replication using large GWAS summary statistics. Table S29. Reverse-MR to test association between obesity-related traits and miR-543 and miR-329-3p. Table S30. Target genes of miR-543 and miR-329-3p associated with BMI or WHR. Table S31. Univariable MR analysis on the associations between miR-1908-5p and metabolites (Metabolon platform). Table S32. Univariable MR analysis on the associations between 12 candidate metabolites and the risk of benign neoplasm of colon. Table S33. MR-Bayesian Model Averaging to identify most likely causal metabolites using a range of prior probabilities. Table S34. Mediation analysis to quantify the proportion of miR-1908-5p on the risk of benign neoplasm of colon mediated by 1-palmitoyl-2-linoleoyl-GPE. Table S35. Multivariable MR between miR-1908-5p and candidate metabolites on benign neoplasm of colon. 
Type Of Material Database/Collection of data 
Year Produced 2024 
Provided To Others? Yes  
URL https://springernature.figshare.com/articles/dataset/Additional_file_1_of_A_comprehensive_study_of_g...
 
Description Biogen MiSL Study Collaboration 
Organisation Biogen Idec
Country United States 
Sector Private 
PI Contribution Study design, analysis of data, interpretation
Collaborator Contribution Study design, interpretation, funding of scanning
Impact Ongoing
Start Year 2019
 
Description Biogen MiSL Study Collaboration 
Organisation Invicro
Country United States 
Sector Private 
PI Contribution Study design and clinical recruitment
Collaborator Contribution Conduct of PET and analysis
Impact Ongoing
Start Year 2019
 
Description Biogen REM2 snRNASeq Collaboration 
Organisation Biogen Idec
Country United States 
Sector Private 
PI Contribution Ascertainment and sequencing of nuclei from TREM2var brains
Collaborator Contribution Bioinformatics for snRNASeq analysis
Impact Pending
Start Year 2019
 
Description Edmond J Safra Foundation and Lily Safra 
Organisation Edmond J Safra Foundation
Country Liechtenstein 
Sector Charity/Non Profit 
PI Contribution Continuing dialogue with a major funder for clinical neuroscience research
Collaborator Contribution Funding of my chair and junior research fellowships, two of which have been awarded to people who will become part of UK DRI
Impact All of my outputs since 2015 should be attributed
Start Year 2014
 
Description Nodthera Inflammasome Collaboration 
Organisation NodThera
Country United Kingdom 
Sector Private 
PI Contribution Assessment of novel potential therapeutics
Collaborator Contribution Joint development of research design
Impact None yet
Start Year 2018