Circuit-driven neuromodulation in the cognitive domain

Lead Research Organisation: University of Oxford
Department Name: UNLISTED

Abstract

Deep brain stimulation (DBS) is a therapy for brain disorders where electrodes, placed deep in the brain, are used to continuously deliver electrical pulses that interrupt brain activity that causes abnormal movement. DBS has also been used to treat cognitive symptoms of brain disorders, but the results have been inconsistent. Imaging studies suggest cognitive symptoms occur because parts of the brain become too strongly or weakly connected. Delivering continuous electrical pulses, as in current DBS, may not be the best way of returning the strength of these connections to a healthy state. In the healthy brain, connections between groups of brain cells become stronger when they are activated together. We propose to use this principle to find better ways to change the strength of connections between brain areas. To develop these techniques, we will carry out “closed-loop” experiments in rodents, where recordings of brain activity in one area are used to control the timing of stimulation to a connected area. We will test the effectiveness of these approaches by seeing whether they lead to changes in the performance of cognitive tasks. We will carry out our experiments using electronics that allow fast translation of successful approaches to human medical devices

Technical Summary

Neuromodulation using deep brain stimulation (DBS) is a highly successful treatment for the motor symptoms of movement disorders. In comparison, DBS treatment for the cognitive symptoms of brain disorders is in its infancy and has been only partially successful. This suggests the current targets for treating cognitive symptoms are viable, but that current stimulation paradigms are suboptimal. Our goal is to establish novel approaches to neuromodulation of current DBS targets that will improve cognitive symptoms in neurological and psychiatric disorders. These approaches will be designed to modulate specific processes in cortico-basal ganglia-thalamocortical circuits that mediate behaviours relevant to several brain disorders. Specifically, we propose that utilising the temporal dynamics of these neural circuits has the potential to have more direct and powerful effects on cognitive symptoms than current methods. Using experiments in rodents, we will use optogenetic and electrical stimulation to manipulate the timing of activity in connected cortical and subcortical areas, utilising their underlying temporal dynamics to strengthen or weaken their connectivity. This “closed-loop” approach will utilise recordings of neuronal signals, including the phase of ongoing local field potential oscillations and spiking activity, in one area of cortico-basal ganglia-thalamic circuits to control the timing of stimulation delivered to one of its target areas. Our approaches will combine expertise in the cell-type specific composition of cortico-basal ganglia microcircuits and the development of novel methods of brain stimulation. We will target behaviours relevant to several neurological and psychiatric diseases, with the rationale that the crucial first step for novel neuromodulation is to uncover approaches that modulate disease-relevant circuits in a way that leads to reproducible behavioural change. To this end, we will quantify the neurophysiological changes elicited by closed-loop stimulation that occur concurrently with alterations in cognitive task performance. Importantly, we will perform closed-loop manipulations using algorithms that run on self-contained programmable chips. This approach will facilitate the translation of closed-loop algorithms to equivalent platforms in the next generation of human stimulation devices and we will explore collaborations with the medical devices industry to facilitate this. In addition to our translational goals, these studies will provide fundamental insights into how the strength of connectivity between different nodes of cortico-basal ganglia-thalamic loops contribute to the performance of specific behaviours.

People

ORCID iD

Publications

10 25 50

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Kavoosi A (2022) Computationally efficient neural network classifiers for next generation closed loop neuromodulation therapy - a case study in epilepsy. in Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference

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Nakamura KC (2021) Input Zone-Selective Dysrhythmia in Motor Thalamus after Dopamine Depletion. in The Journal of neuroscience : the official journal of the Society for Neuroscience

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Toth R (2020) DyNeuMo Mk-2: An Investigational Circadian-Locked Neuromodulator with Responsive Stimulation for Applied Chronobiology. in Conference proceedings. IEEE International Conference on Systems, Man, and Cybernetics

Related Projects

Project Reference Relationship Related To Start End Award Value
MC_UU_00003/1 01/04/2020 31/03/2025 £1,280,000
MC_UU_00003/2 Transfer MC_UU_00003/1 01/04/2020 31/03/2025 £2,361,000
MC_UU_00003/3 Transfer MC_UU_00003/2 01/04/2020 31/03/2025 £1,126,000
MC_UU_00003/4 Transfer MC_UU_00003/3 01/04/2020 31/03/2025 £2,269,000
MC_UU_00003/5 Transfer MC_UU_00003/4 01/04/2020 31/03/2025 £2,274,000
MC_UU_00003/6 Transfer MC_UU_00003/5 01/04/2020 31/03/2025 £2,177,000
 
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Geographic Reach Multiple continents/international 
Policy Influence Type Participation in a guidance/advisory committee
URL https://parkinsonsroadmap.org/
 
Title Matlab toolbox for plotting and analysis of diurnal patterns in data. 
Description The Circa Diem toolbox is designed to generate diurnal visualisations and analyses of data points with associated MATLAB 'datetime' values. The basic input data format for the toolbox can be either: a regularly spaced series of time points as a vector of MATLAB 'datetimes' that correspond to events or measurement times, and a series of values or weights corresponding to these measurement times or events. Here the focus is on whether the measured variable has diurnal properties. A series of event times. Here, the focus is on whether the event times are differently distributed across the times of day. Circa Diem also allows for some statistical tests of the extent of non-uniformity of diurnal patterns. For this, the toolbox is indebted to the circstat_matlab toolbox by Philipp Berens (some of the statistical functions are essentially wrapper functions around circstat functions). 
Type Of Material Physiological assessment or outcome measure 
Year Produced 2021 
Provided To Others? Yes  
Impact This toolbox was used for the data analysis in: Van Rheede at el, Diurnal modulation of subthalamic beta oscillatory power in Parkinson's disease patients during deep brain stimulation (10.1101/2022.02.09.22270606) 
URL https://github.com/joramvanrheede/circa_diem
 
Title OscillTrack 
Description OscillTrack tracks oscillatory activity of a defined frequency in real-time. It provides a complex estimate of the signal within a frequency band of interest and from this the instantaneous phase and amplitude. It can be used to trigger electrical, optogenetic or other stimulation. 
Type Of Material Physiological assessment or outcome measure 
Year Produced 2022 
Provided To Others? Yes  
Impact Downloaded by other investigators 
URL https://ora.ox.ac.uk/objects/uuid:f526084e-6c26-48ef-b211-fb2933aeaaf1
 
Title Electrocorticogram with closed-loop stimulation of basal ganglia nuclei aligned to beta oscillation phase 
Description This is the electrocortigram data and stimulation times described in McNamara et al, 2022 (https://doi.org/10.1016/j.celrep.2022.111616) 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
Impact Many investigators have already requested to use the data 
URL https://data.mrc.ox.ac.uk/ecog-closed-loop
 
Title Wideband recordings from silicon probes in the subthalamic nucleus of 6-OHDA hemi-lesioned rats during anaesthesia 
Description MATLAB (.mat) formatted electrophysiological wideband recordings from silicon probes in the subthalamic nucleus of 6-OHDA hemi-lesioned rats during anaesthesia. Details of the data recording can be found in SmrData.WvTits for every file. All files include ECoG recordings (channel 1 +2, ipsi and contralateral of the lesioned hemisphere) and 32 raw wideband channels (Probe 1-32). These probe channels are recorded along the lead trajectory as described in the Wiest et al, 2023 (https://elifesciences.org/articles/82467). 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
Impact No output so far 
URL https://data.mrc.ox.ac.uk/data-set/wideband-recordings-silicon-probes-subthalamic-nucleus-6-ohda-hem...
 
Description Berlin University Alliance collaboration with Prof. Zoltan Molnar 
Organisation Charité - University of Medicine Berlin
Country Germany 
Sector Academic/University 
PI Contribution Collaborator on Einstein Visiting Fellowship to Prof. Zoltan Molnar (https://www.dpag.ox.ac.uk/news/einstein-visiting-fellowship-awarded-to-zoltan-molnar). We will contribute to experiments in trans-synaptic tracing as part of the larger consortium.
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Impact None so far
Start Year 2020
 
Description Brain computer interfaces to control NREM sleep oscillations 
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Department Department of Physiology, Anatomy and Genetics
Country United Kingdom 
Sector Academic/University 
PI Contribution We are designing a brain computer interface to modulate oscillations in non-rapid eye movement sleep. This will be a valuable tool for basic research and could have clinical benefits for a variety of brain disorders.
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Start Year 2021
 
Description Circadian Modulation of Beta oscillations in Parkinson's Disease 
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Country Germany 
Sector Academic/University 
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Collaborator Contribution Our partners made recordings of the amplitude of beta oscillations from the subthalamic nucleus of people with Parkinson's Disease with implanted deep brain stimulation devices (Medtronic Percept) over many weeks.
Impact doi: https://doi.org/10.1101/2022.02.09.22270606
Start Year 2021
 
Description Closed-loop Neural Interface Technologies (Close-NIT) Network Plus awarded by EPSRC 
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Department Division of Brain Sciences
Country United Kingdom 
Sector Academic/University 
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Start Year 2022
 
Description Closed-loop Neural Interface Technologies (Close-NIT) Network Plus awarded by EPSRC 
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Department MRC Cognition and Brain Sciences Unit
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Sector Academic/University 
PI Contribution Successful funding application for an MRC Network Plus award.
Collaborator Contribution Successful funding application for an MRC Network Plus award.
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Description Closed-loop Neural Interface Technologies (Close-NIT) Network Plus awarded by EPSRC 
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Department Newcastle University Medical School
Country United Kingdom 
Sector Academic/University 
PI Contribution Successful funding application for an MRC Network Plus award.
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Start Year 2022
 
Description Closed-loop Neural Interface Technologies (Close-NIT) Network Plus awarded by EPSRC 
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Sector Academic/University 
PI Contribution Successful funding application for an MRC Network Plus award.
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Department Wellcome Trust Cente for Neuroimaging
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Sector Academic/University 
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Organisation Hebrew University of Jerusalem
Department Faculty of Medicine
Country Israel 
Sector Academic/University 
PI Contribution Our team is applying our expertise in closed-loop stimulation to design a system of manipulating sleep oscillations in parkinsonian non-human primates.
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Department Institute of Neurology
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Sector Academic/University 
PI Contribution Preliminary data on the role of neural oscillations in motor learning during reaching in mice
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Impact Funding application to MRC Responsive Mode
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Description Dr Christian Moll/Prof Andreas Engel 
Organisation University Medical Center Hamburg-Eppendorf
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Sector Hospitals 
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Department Department of Experimental Psychology
Country United Kingdom 
Sector Academic/University 
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Country Netherlands 
Sector Academic/University 
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Organisation German Centre for Neurodegenerative Diseases
Country Germany 
Sector Public 
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Impact Funding application to the COEN scheme (https://www.coen.org/)
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Title APPARATUS AND METHOD FOR PHASE TRACKING AN OSCILLATORY SIGNAL 
Description Apparatus and methods for phase tracking an oscillatory signal are provided. In one arrangement, an input signal is received. First and second reference oscillatory signals are received at the frequency of a target frequency component of the input signal. The first and second reference oscillatory signals are phase shifted relative to each other. Weights of a weighted sum of the first and second reference oscillatory signals are iteratively varied to match the weighted sum to the input signal. The weights of the matched weighted sum are used to provide real time estimates of the phase of the target frequency component of the input signal. 
IP Reference WO2020183152 
Protection Patent application published
Year Protection Granted 2020
Licensed No
Impact There have been no impacts so far.
 
Description Host for In2Science student placement 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact My research team hosted a 6th form student on the In2Science scheme. Over a week they were supervised in a series of activities relating to work going on in the group aswell as activities run by In2Science
Year(s) Of Engagement Activity 2022
URL https://in2scienceuk.org/
 
Description IBM 24 Hours of Science 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact I participated on a panel in IBMs 24hrs of Science event, whereby they have have 24hrs of talks and presentations on scientific topics relevant to the company. >3000 employees have access to the talks online and recorded. My role was to talk about the challenges of big data in neuroscience.
Year(s) Of Engagement Activity 2022
 
Description In2science 'virtual placement programme' 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact In July/August 2020, MRC BNDU continues to participate in the previously partnered with the charity In2science to host Year 12 school pupils enrolled on their STEM work-experience programme. Each summer, for the past 4 years, we have delivered personalised mentoring and rich STEM experiences for pupils from disadvantaged backgrounds. Naomi Berry from Sharott group took part in an online mentor for local school children.
Year(s) Of Engagement Activity 2020
URL https://in2scienceuk.org/
 
Description School Visit (Swan School, Oxford) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact Myself and two colleagues visited a local school and engaged a group for around 30 students in various activities related to different aspects of neuroscience.
Year(s) Of Engagement Activity 2022