Importance of N-glycosylation at the Neuromuscular Junction

Lead Research Organisation: University of Oxford
Department Name: Clinical Neurosciences

Abstract

When someone asks you: "what do sugars do in our body?" What do you think of? Do you just think about them as a source of calories? Well sugars are much more than just a source of calories! They can form a great variety of intricate and complex structures called glycans, which play many important roles in our body. Some of the most important roles they play is in helping proteins assemble and function properly. Glycans are synthesised and transferred onto proteins in an enzymatic process called glycosylation, which is one of the most common and important post-translational processes that proteins undergo. However, protein glycosylation is poorly understood, with very little information available for most of the enzymes involved. We also don't know the biological roles of the vast majority of glycans.
Glycosylation is essential to all complex life including plants, animals and fungi. This is exemplified by what happens when the glycosylation process malfunctions. Mutations in nearly all the genes involved in glycosylation can lead to developmental disorders, with a spectrum of symptoms and severity. In the most severe cases, patients have the multisystem disorder congenital disease of glycosylation (CDG), and can pass away within one year of birth, or even in utero. An intriguing group of patients have congenital myasthenic syndromes (CMS), with symptoms restricted to the abnormal development of neuromuscular junctions (NMJ), which are essential for communication between nerves and muscles, and have fatiguable muscle weakness. I aim to use the study of these cases to provide a window for understanding the more severe multisystem disorders. Around 1,000 patient families have been identified so far with mutations in glycosylation genes, with more found every year. There are very few treatment options for these patients, most of which only temporarily help alleviate symptoms, and are ineffective in the long term.
This proposal aims to improve our understanding of glycosylation and the diseases associated with it, and has 3 main objectives:
1) Better understand the fundamental properties of the enzymes that are involved in the protein glycosylation pathway, and how mutations change these properties to bring about disease.
2) Identify the changes in the glycosylation of key NMJ glycoproteins in muscle cells obtained from CMS patients and healthy controls.
3) Test therapeutic methods to correct the disease associated changes observed in the protein and cellular models of disease created in 1) and 2).
To achieve these objectives, a multidisciplined approach will be employed combining cutting edge techniques in structural biology, biochemistry, molecular biology, cellular biology and glycomics. This research program will exploit the data gathered by the specialist genetics centres from the UK and around the world, maximising the benefits of modern genetics and sequencing technology to address fundamental questions in protein glycosylation, and the mechanisms underlying CMS and CDG. A biochemical and cellular platform will be created to test novel therapeutic approaches to treating glycosylation-associated CMS. The knowledge gained from this proposal will directly benefit CMS and CDG patients as well as the clinicians and scientists trying to help them. It will also benefit scientists from a variety of other fields including neuroscience, glycobiology, structural biology, and enzymology. My previous work in this area has already helped to develop novel antibiotics against the bacteria that causes tuberculosis. Glycans and glycoproteins are commonly used in medicines, therefore, information on their biosynthetic mechanisms will also have great benefits for the pharmaceutical and biotechnology industries.

Technical Summary

This Proposal has 3 aims:
Aim 1: study the structure and function of proteins involved in the N-glycosylation pathway, and how mutations found in patients affect their function and interactions.
Methods: use suspension adapted insect and mammalian cells for large scale protein production, LIC methods to produce DNA vectors, and high throughput purification and crystallisation methods to obtain protein crystals. X-ray diffraction data will be collected at Diamond Light Source. Enzyme kinetics will be assessed using colorimetric assays, rapidfire-QTOF, and TLC based assays using radioisotope labelled substrates. Protein-protein interactions will be assessed in vitro using co-affinity purification, SEC-MALS, and SPR, and in cells using super resolution microscopy.
Scientific opportunities: create protein structural and biochemical tools for studying the fundamental properties of these proteins, as well as the effect of disease genotypes.
Aim 2: examine how mutations identified in CMS patients lead to changes in the glycosylation of key glycoproteins involved in NMJ development and function.
Methods: immortalised muscles cells derived from CMS patients and controls will be differentiated into myotubes. Agrin will be added to stimulate AChR clustering. NMJ glycoproteins will be purified from these patient and control cells using cell fractionation, affinity purification, SEC, and IEC. Glycomics analysis of purified glycoproteins to determine the differences between the glycosylation of patient and control cells.
Scientific opportunities: create a tissue platform for studying glycosylation-associated CMS.
Aim3: Test methods of treatment.
Methods: Use protein and cell platforms developed in 1) and 2) to test different methods of altering the enzymatic flux of the N-glycosylation pathway, and see if they can rescue the effect of disease causing genotypes.
Medical opportunities: produce potential therapeutic methods for treating glycosylation-associated CMS.

Planned Impact

The research detailed in this proposal will investigate the fundamental biology of proteins involved in the N-glycosylation pathway, and how mutations in these proteins can lead to changes in neuromuscular junction development and function, and disease. There are many potential beneficiaries to the research, who will be split and discussed in 3 categories:
1) Clinicians and patients
2) General public
3) Biotechnology and pharmaceutical industries
1) The primary aim of this proposal is to better understand the biological mechanisms underlying N-glycosylation-associated Congenital Myasthenic Syndromes (CMS) and Congenital Diseases of Glycosylation (CDG), and to create a biochemical and cellular platform to test novel treatments for these diseases. With advances in next-generation DNA sequencing, and genetic screening procedures helping to pick up cases earlier, this study will help clinicians provide a definitive diagnoses and a basis for prognosis advice, and more personalised treatment plans for patients. This information will also be disseminated to patient charities to help patient families better understand the illness and give them encouragement that progress is being made in research, and there may be hope for novel therapies in the future. In the long term, I hope work from this proposal will be the first step on a path to finding effective treatments for these patients.
2) Sugars and carbohydrates are fundamentally important to all life on earth, yet most of the general public only know that they make you fat, make your teeth rotten, and give you diabetes. There has been a lot of negative publicity over recent years about this class of biochemicals, and the general public need to know more about the many different roles carbohydrates play in our bodies, and just how important they are. Therefore, a variety of different public engagement activities, designed to suit different sectors of the public, will be undertaken to introduce them to some of the other important roles that sugars play in our bodies.
3) There is considerable economic potential to the scientific data generated from the research described in this proposal. One of the key objectives of this proposal is to create a biochemical and cellular platform to test novel therapeutic strategies to correct the molecular changes produced by CMS-associated mutations in genes involved in N-glycosylation. The pharmaceutical industry is increasingly interested in targeting rare metabolic diseases, and there are few therapies available for the majority of patients with disorders of N-glycosylation. During this proposal I will use this platform to test 1-2 different therapeutic strategies, which if effective could lead to interest from the commercial sector to develop them further.
Many small-molecule drugs such as antibiotics, antivirals and anticancer drugs contain glycans as part of their core structure. Most biotherapeutic products are glycoproteins, such as erythropoietin, cytokines, antibodies, glycosyltransferases, and glycosidases. Another key scientific objective of this proposal is to better understand the structure and biochemistry of enzymes in the N-glycosylation pathway. Work done to achieve this objective will reveal scientific information on the biosynthetic mechanisms of complex glycans and glycoproteins, which will be of great interest to the pharmaceutical and biotechnology industries.
 
Title Neurotale on N-glycosylation 
Description I performed a story at an IF festival to explain the journal of an N-glycan from synthesis to functionality as part of a protein, acting from the perspective of a molecule. 
Type Of Art Performance (Music, Dance, Drama, etc) 
Year Produced 2021 
Impact It helped inform the audience of the important functions that carbohydrates play beyond energy metaolbism, as glycosylations. It also gave them a different perspective of the molecular environment within a cell. 
URL https://if-oxford.com/event/neurotales-3/
 
Description Joined the Board of Scientific Advisers for CDG UK
Geographic Reach National 
Policy Influence Type Participation in a guidance/advisory committee
URL https://cdg-uk.org/
 
Description Developing drugs for fast channel Congenital Myasthenic Syndromes
Amount £160,000 (GBP)
Organisation Wellcome Trust 
Sector Charity/Non Profit
Country United Kingdom
Start 10/2019 
End 09/2023
 
Description Gene therapy for congenital myasthenic syndromes with deficiency in acetylcholine receptors
Amount £148,792 (GBP)
Funding ID 22GRO-PG24-0561-1 
Organisation Muscular Dystrophy UK 
Sector Charity/Non Profit
Country United Kingdom
Start 02/2023 
End 02/2025
 
Description Solving the mysteries of N-glycosylation
Amount £120,000 (GBP)
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 10/2019 
End 09/2023
 
Description Targeted DOK7 Gene Therapy for Congenital Myasthenic Syndromes
Amount $600,261 (USD)
Organisation National Institute of Health 
Sector Public
Country Italy
Start 12/2021 
End 05/2023
 
Description Testing for efficacy of an anti-Musk agonist antibody in a humanized mouse model for AChR deficiency.
Amount € 431,480 (EUR)
Organisation Argenx 
Sector Private
Country Belgium
Start 02/2022 
End 01/2024
 
Description Changes in N-glycosylation of neuromuscular junction proteins in glycosylation-CMS 
Organisation Imperial College London
Department Faculty of Natural Sciences
Country United Kingdom 
Sector Academic/University 
PI Contribution Me and my research team are actively trying to create cell culture models of glycosylation-CMS using patient derived myoblasts and gene edited C2C12 cells. We are also optimising purification protocols for isolating specific glycoproteins of interest from glycoproteomics analysis.
Collaborator Contribution My partners at the Univeristy of Oxford have a lot of expertise in gene editing C2C12 cells, and have helped train me and my team to use these techniques in this cell line. My partners at Imperial College are leading experts in glycoproteomics, with a world class facilites for carrying out this type of analysis. Once we have purified the glycoproteins of interest, our collaborators at Imperial College will conduct glycoproteomics to identify the changes between patient and control samples.
Impact We are trying to identify the specific changes to the glycosylation of proteins that are key to the abnormal development and function of neuromuscular junctions in glycosylation-CMS. This is a multidisciplinary collaboration combining techniques in biochemistry, cell biology, mass-spectrometry, and glycoproteomics
Start Year 2019
 
Description Changes in N-glycosylation of neuromuscular junction proteins in glycosylation-CMS 
Organisation University of Oxford
Department Oxford Neuroscience
Country United Kingdom 
Sector Academic/University 
PI Contribution Me and my research team are actively trying to create cell culture models of glycosylation-CMS using patient derived myoblasts and gene edited C2C12 cells. We are also optimising purification protocols for isolating specific glycoproteins of interest from glycoproteomics analysis.
Collaborator Contribution My partners at the Univeristy of Oxford have a lot of expertise in gene editing C2C12 cells, and have helped train me and my team to use these techniques in this cell line. My partners at Imperial College are leading experts in glycoproteomics, with a world class facilites for carrying out this type of analysis. Once we have purified the glycoproteins of interest, our collaborators at Imperial College will conduct glycoproteomics to identify the changes between patient and control samples.
Impact We are trying to identify the specific changes to the glycosylation of proteins that are key to the abnormal development and function of neuromuscular junctions in glycosylation-CMS. This is a multidisciplinary collaboration combining techniques in biochemistry, cell biology, mass-spectrometry, and glycoproteomics
Start Year 2019
 
Description Deciphering the pathogenic mechanisms of mutations underlying Congenital Diseases of Glycosylation 
Organisation Sanford Burnham Prebys Medical Discovery Institute
Country United States 
Sector Charity/Non Profit 
PI Contribution We are expressing and purifying proteins with disease causing mutations, and performing biochemical and biphysical analysis on them to elucidate the pathegenic mechanisms of the mutations.
Collaborator Contribution Our collaborator is a leading expert on Congenital Diseases of Glycosylation, and is providing cell biology and clinical information on the mutations.
Impact We are identifying the changes in the biochemical and biophysical characteristics of mutant glycosylation enzymes that lead to congenital diseases of glycosyation. This is a multi-disciplined collaboration between biochemistry, biophysics, cell biology, and clinical practice
Start Year 2019
 
Description Structure and function of N-glycosylation enzymes 
Organisation University of Oxford
Department Department of Chemistry
Country United Kingdom 
Sector Academic/University 
PI Contribution My research team are expressing and purifying the N-glycosylation enzymes, and carrying out structural and kinetic studies.
Collaborator Contribution The SGC has world class expertise and facilities for biophysics, and protein crystallization, and have both helped train me and my staff, as well as give us access to these crystilization facilities. The Chemistry Department are providing the facilities, and training for my team to synthesize the lipid, and glycolipid substrates of the enzymes we are studying, that is crucial for carrying out enzyme kinetics studies.
Impact We are solving the structure and mechanism of enzymes involved in the N-glycosylation pathway. This is a multi-disciplinary collaboration between synthetic chemistry, biochemistry, biophysics, glycobiology, and X-ray crystallography
Start Year 2019
 
Description Structure and function of N-glycosylation enzymes 
Organisation University of Oxford
Department Structural Genomics Consortium (SGC)
Country United Kingdom 
Sector Public 
PI Contribution My research team are expressing and purifying the N-glycosylation enzymes, and carrying out structural and kinetic studies.
Collaborator Contribution The SGC has world class expertise and facilities for biophysics, and protein crystallization, and have both helped train me and my staff, as well as give us access to these crystilization facilities. The Chemistry Department are providing the facilities, and training for my team to synthesize the lipid, and glycolipid substrates of the enzymes we are studying, that is crucial for carrying out enzyme kinetics studies.
Impact We are solving the structure and mechanism of enzymes involved in the N-glycosylation pathway. This is a multi-disciplinary collaboration between synthetic chemistry, biochemistry, biophysics, glycobiology, and X-ray crystallography
Start Year 2019
 
Description Studying autoimmune antibodies involved in Myasthenia Gravis 
Organisation University of Oxford
Department Nuffield Department of Clinical Neurosciences
Country United Kingdom 
Sector Academic/University 
PI Contribution We are providing state of the art shaking incubators with temperature, CO2 and humidity control for antibody production. We have also provided expert guidance in protein production and purification.
Collaborator Contribution My partners are using our incubators to express and purify clinically important autoimmune antibodies to further our understanding of Myasthenia Gravis
Impact Our collaboration has allowed the production of autoimmune antibodies found in Myasthenia Gravis patients for cell based assays to characterize their specificity. This is a multidisciplined collaboration between biochemistry, cell biology, immunological and neurology
Start Year 2019
 
Description Using lentiviral techniques for protein production 
Organisation University of Oxford
Department Radcliffe Department of Medicine
Country United Kingdom 
Sector Academic/University 
PI Contribution We have provided state of the art shaking incubators with temperature, CO2 and humidity control for T-cell receptor complex production. We are also using RDM expertise in lentiviral protein production techniques to produce antibodies to purify nicotinic acetylcholine receptors.
Collaborator Contribution Our collaborators are using our incubators to further our understanding of T-cell receptor biology. They are also providing expert advice on antibody production, providing lentiviral vectors, and training our staff in antibody production.
Impact We are using our combined knowledge and facilities to further research into T-cell receptors and acetylcholine receptors. This is a multi-disciplined collaboration between immunology, and neurology
Start Year 2019
 
Description 2020 SBP Rare Disease Day Symposium & CDG Family Conference 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Patients, carers and/or patient groups
Results and Impact Over 50 families of patients living with congenital diseases of glycosylation attended the symposium along with ~50 scientists and clinicians. The symposium involved a variety of different platforms, including talks, panel Q&A sessions, discussion sessions, and social events. It involved a people from a wide range of backgrounds, including scientists, clinicians, industry, philanthropists, speech therapists, lawyers along with patients and carers. It was designed to allow all stake holders to engage with each other in an open and collaborative way, with the patient families at the centre, with the aim of creating a collaborative ecosystem to best inform, and deliver advancements for the patients. I gave an invited presentation of the work our group has done, and are planning to do. I participated in "doctors in" sessions where patient families asked all the scientists and clinicians questions that they had. I also proactively engaged with numerous patient families, particularly those with a connection to the UK, to understand the challenges they have to deal with. This gave me a better understanding of key research questions I should focus on, as well as the clinicians and patient groups I should work with in the UK.
Year(s) Of Engagement Activity 2020
URL https://www.sbpdiscovery.org/calendar/2020-sbp-rare-disease-day-symposium
 
Description Attended CMS Patients' day 2020 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Patients, carers and/or patient groups
Results and Impact I attended the annual Patients' day workshop set up to inform and support patients suffering from Congenital Myasthenic Synfromes, organised by The Specialist CMS service in Oxford and Myaware. Roughly 20 patient families attended, along with 10 professionals working on CMS. The professionals gave talks about improvements in patient care, current developments in research, and how to access more information and help. There was also a chance for the patients and families to ask questions from the professionals about the specific challenges that they faced, as well as questions about the science and treatment options available. A representative of Myaware also gave information about how the disability benefits system works. There was lots of engagement from the patient families, which was more challenging with a virtual meeting, and positive feedback about the workshop, with patients looking forward to future meetings.
Year(s) Of Engagement Activity 2020
URL https://www.ouh.nhs.uk/services/referrals/neurosciences/myasthenia.aspx
 
Description Congenital Myasthenic Syndromes Patient Day 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Patients, carers and/or patient groups
Results and Impact I attended the Annual CMS patients' day organised by the clinicians of the specialist CMS clinic in Oxford to talk to the patients and carers about my team's work on CMS. Around 40 patients attended the event from across the UK. There were talks from researchers, clinicians, as well as patients, and charities, all aimed towards sharing our experiences and understanding of CMS to help patients deal with the condition better. There was some discussion sessions as well as lunch and breaks to give plenty of opportunities for conversations between everyone involved. A 3D model of the neuromuscular junction was created by Prof David Beeson's team using many fluorescent images stacked together to support the event, allowing patients to navigate the structure the underlies their illness using a virtual reality head set. The event allowed me to help explain the pathogenic mechanisms underlying the condition to some of the patients. The event also gave me an opportunity to interact with patients directly, giving me an insight into the lives of the patients and their carers, which gives me a better understanding of what help they need.
Year(s) Of Engagement Activity 2019
URL https://www.ouh.nhs.uk/services/referrals/neurosciences/myasthenia.aspx
 
Description Joined the Panel of Scientific Advisors for CDG UK 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Patients, carers and/or patient groups
Results and Impact The Board of Scientific Advisors had a meeting to discuss the strategy of CDG UK going forwards, and how it can best serve the CDG patient community.
Year(s) Of Engagement Activity 2020
URL https://cdg-uk.org/
 
Description New treatments for Congenital Myasthenia 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Patients, carers and/or patient groups
Results and Impact At the annual congenital myasthenia patients' day I gave a presentation about the new therapies that were in development for congenital myasthenia. I later conducted a workshop to explain how we diagnose patients using genetics and functional assays. There were roughly 50 patients and family members attending along with scientific and clinical collaborators. There were also patients from overseas, including those with their own charitable foundations in attendance.
Year(s) Of Engagement Activity 2022
 
Description Told a story about N-glycosylation at Neurotales 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact I told a story about the process and function N-glycosylation from the perspective of a carbohydrate. The intended purpose was to increase awareness of this common and important post-translational modification by making it more relatable and accessible. The story sparked quite a few questions and discussions from the audience, indicating interest and understanding in the area.
Year(s) Of Engagement Activity 2021
URL https://if-oxford.com/event/neurotales-2/
 
Description Webinar for CDG UK patient families 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Patients, carers and/or patient groups
Results and Impact I gave a webinar to the patient families of CDG UK to explain the biological processes involved in protein glycosylation, and its importance to our health on a number of different scales.
Year(s) Of Engagement Activity 2021
 
Description Workshop for Myaware 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Supporters
Results and Impact I helped the clinical team at the National CMS referral centre conduct an online workshop for the charity Myaware where I explained the genetics and functional assays we use to determine whether a patient has congenital myasthenia, and what subtype they have. There were roughly 25 participants from the charity. The aim of the workshop is to help educated the workers at the charity to better help support congenital myasthenic patients.
Year(s) Of Engagement Activity 2023