How heterogeneous are oligodendroglia from normal human brain and spinal cord?
Lead Research Organisation:
University of Edinburgh
Department Name: MRC Centre for Regenerative Medicine
Abstract
The intricacies of the human brain are probably what define us as human, and the oligodendrocytes of the brain are vital in maintaining this. These cells extend processes of their cell membrane to wrap insulating myelin sheaths around nerve fibres, allowing electrical impulses to travel quickly along nerves, and they also nourish the underlying nerve, helping it to survive healthily. This process of myelination happens mostly after birth in humans, and allows the normal development of a baby into an adult. However, it can be disrupted around birth, due to gene defects or premature birth, in adulthood in diseases such as multiple sclerosis and in old age, either in normal ageing, or in other neurodegenerative diseases.
We used to consider all oligodendrocytes as very similar, but we now know that they are likely to exist as different subtypes, perhaps depending on where they came from in development, where they exist in the brain and spinal cord, and depending on the age and sex of the human. They may also change their type in disease. We call this heterogeneity, and the best way to determine how different cells are is to consider them individually. We are now able to examine the RNA messages (which define how a cell behaves) in individual cells, comparing them with other individual cells, and finding out how similar and how different these are using computer programs, allowing thousands of comparisons in an objective way. We can then try and confirm the computer's predictions using techniques to label single RNA molecules, identifying which cells they are in and where they are in brain tissue using antibodies.
In this project, we will extract oligodendrocytes from human post mortem brain and spinal cord tissue from male and female babies, young adults and old adults, from two different brain regions and spinal cord, detect the RNAs in each individual oligodendrocyte and then study the similarities and differences. This will allow us to identify subtypes of oligodendrocytes that behave differently, and that might be more vulnerable to disease or ageing in males and females. In the future, we can then compare oligodendrocytes from people with other oligodendrocyte diseases with these, and develop therapies that target the subtype of oligodendrocytes to help the disease, in a very specific way.
This will be part of the Human Cell Atlas where all data will be stored and pooled from researchers all around the world, allowing free access and collaboration, which the aim of improving and accelerating biological and medical research.
We used to consider all oligodendrocytes as very similar, but we now know that they are likely to exist as different subtypes, perhaps depending on where they came from in development, where they exist in the brain and spinal cord, and depending on the age and sex of the human. They may also change their type in disease. We call this heterogeneity, and the best way to determine how different cells are is to consider them individually. We are now able to examine the RNA messages (which define how a cell behaves) in individual cells, comparing them with other individual cells, and finding out how similar and how different these are using computer programs, allowing thousands of comparisons in an objective way. We can then try and confirm the computer's predictions using techniques to label single RNA molecules, identifying which cells they are in and where they are in brain tissue using antibodies.
In this project, we will extract oligodendrocytes from human post mortem brain and spinal cord tissue from male and female babies, young adults and old adults, from two different brain regions and spinal cord, detect the RNAs in each individual oligodendrocyte and then study the similarities and differences. This will allow us to identify subtypes of oligodendrocytes that behave differently, and that might be more vulnerable to disease or ageing in males and females. In the future, we can then compare oligodendrocytes from people with other oligodendrocyte diseases with these, and develop therapies that target the subtype of oligodendrocytes to help the disease, in a very specific way.
This will be part of the Human Cell Atlas where all data will be stored and pooled from researchers all around the world, allowing free access and collaboration, which the aim of improving and accelerating biological and medical research.
Technical Summary
The intricacies of the human brain are probably what define us as human, and the oligodendrocytes of the brain are vital in maintaining this. These cells form the myelin sheaths around nerve axons, allowing fast saltatory nerve conduction, and metabolic support to the underlying axon. Myelination is mostly postnatal, and can be disrupted around birth, due to genetic abnormalities or premature birth, in adulthood in diseases such as multiple sclerosis and in old age, either in normal ageing, or in other neurodegenerative diseases.
We used to consider all oligodendrocytes as very similar, but we now know that they likely exist as different subtypes, depending on their developmental source, final location, the age and sex of the human, and the presence of neurological disease. This heterogeneity can now be studied in individual cells or nuclei by RNA sequencing, comparing each cell to another within and across humans, from post mortem tissue, using bioinformatics, with validation using immunohistochemistry/immunofluorescence and in situ hybridisation on such tissue.
In this project, we will extract oligodendroglial nuclei, from precursors to myelinating cells, from human post mortem brain and spinal cord tissue from male and female fetuses, young adults and old adults, from forebrain, cerebellum and spinal cord, and perform single nuclei RNAseq. We will then analyse these data, pooled with our previous data, and any published and HCA data to better define oligodendroglial subclusters. We will validate them with our previous markers and new markers, and then study the similarities and differences between our sample sets. These differences may define functional differences which confer differential vulnerability to disease or ageing, in central nervous system regions, in males and females. In the future, we can repeat this with disease samples, improving target pathway discovery for white matter disease therapeutics.
We used to consider all oligodendrocytes as very similar, but we now know that they likely exist as different subtypes, depending on their developmental source, final location, the age and sex of the human, and the presence of neurological disease. This heterogeneity can now be studied in individual cells or nuclei by RNA sequencing, comparing each cell to another within and across humans, from post mortem tissue, using bioinformatics, with validation using immunohistochemistry/immunofluorescence and in situ hybridisation on such tissue.
In this project, we will extract oligodendroglial nuclei, from precursors to myelinating cells, from human post mortem brain and spinal cord tissue from male and female fetuses, young adults and old adults, from forebrain, cerebellum and spinal cord, and perform single nuclei RNAseq. We will then analyse these data, pooled with our previous data, and any published and HCA data to better define oligodendroglial subclusters. We will validate them with our previous markers and new markers, and then study the similarities and differences between our sample sets. These differences may define functional differences which confer differential vulnerability to disease or ageing, in central nervous system regions, in males and females. In the future, we can repeat this with disease samples, improving target pathway discovery for white matter disease therapeutics.
Planned Impact
Who will benefit from this research?
Patients with white matter diseases: Oligodendrocytes are increasingly implicated in neurodegenerative diseases, especially in diseases such as multiple sclerosis, but also in other diseases such as Parkinsonian diseases and Huntington's disease as well as dementias including cerebral small vessel disease. This research will help define how oligodendrocytes behave in normal brain over the human lifespan, defining differences between regions of the brain and spinal cord, and between males and females, and between patients. This then paves the way for studying these in other diseases, to compare, which we hope will lead to advances in understanding of these diseases and therapeutics.
Researchers: We will provide techniques of how to extract and analyse nuclei from human post mortem tissue, to answer questions as to whether oligodendrocyte heterogeneity exists between ages, sexes and brain and spinal cord region, and provide robust and validated markers for this heterogeneity.
Private sector companies e.g. pharma: interest as to whether there are new targets for therapeutics in neurodegenerative diseases.
Local, national and international policy-makers, for determining best use of funding: interest as to whether therapeutic strategies currently used hold up to scrutiny or whether alternatives might be better pursued and funded.
Patients with white matter diseases: Oligodendrocytes are increasingly implicated in neurodegenerative diseases, especially in diseases such as multiple sclerosis, but also in other diseases such as Parkinsonian diseases and Huntington's disease as well as dementias including cerebral small vessel disease. This research will help define how oligodendrocytes behave in normal brain over the human lifespan, defining differences between regions of the brain and spinal cord, and between males and females, and between patients. This then paves the way for studying these in other diseases, to compare, which we hope will lead to advances in understanding of these diseases and therapeutics.
Researchers: We will provide techniques of how to extract and analyse nuclei from human post mortem tissue, to answer questions as to whether oligodendrocyte heterogeneity exists between ages, sexes and brain and spinal cord region, and provide robust and validated markers for this heterogeneity.
Private sector companies e.g. pharma: interest as to whether there are new targets for therapeutics in neurodegenerative diseases.
Local, national and international policy-makers, for determining best use of funding: interest as to whether therapeutic strategies currently used hold up to scrutiny or whether alternatives might be better pursued and funded.
Publications
Becker CE
(2019)
Association Between Endothelial Cell Stabilizing Medication and Small Vessel Disease Stroke: A Case-Control Study.
in Frontiers in neurology
Bøstrand SMK
(2021)
Oligodendroglial Heterogeneity in Neuropsychiatric Disease.
in Life (Basel, Switzerland)
Ferrari Bardile C
(2019)
Intrinsic mutant HTT-mediated defects in oligodendroglia cause myelination deficits and behavioral abnormalities in Huntington disease.
in Proceedings of the National Academy of Sciences of the United States of America
Jäkel S
(2020)
What Have Advances in Transcriptomic Technologies Taught us About Human White Matter Pathologies?
in Frontiers in cellular neuroscience
Lloyd AF
(2019)
Central nervous system regeneration is driven by microglia necroptosis and repopulation.
in Nature neuroscience
Matjusaitis M
(2019)
Reprogramming of Fibroblasts to Oligodendrocyte Progenitor-like Cells Using CRISPR/Cas9-Based Synthetic Transcription Factors.
in Stem cell reports
Meireles AM
(2018)
The Lysosomal Transcription Factor TFEB Represses Myelination Downstream of the Rag-Ragulator Complex.
in Developmental cell
Milbreta U
(2019)
Scaffold-Mediated Sustained, Non-viral Delivery of miR-219/miR-338 Promotes CNS Remyelination.
in Molecular therapy : the journal of the American Society of Gene Therapy
Neely S
(2022)
New oligodendrocytes exhibit more abundant and accurate myelin regeneration than those that survive demyelination
in Nature Neuroscience
Description | A 3D Neurosterol Atlas of Mouse Brain |
Amount | £248,091 (GBP) |
Funding ID | BB/T018518/1 |
Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
Sector | Public |
Country | United Kingdom |
Start | 11/2020 |
End | 12/2024 |
Description | Do adult human oligodendrocytes remyelinate poorly and can we change this to better treat progressive multiple sclerosis? |
Amount | £600,000 (GBP) |
Funding ID | MRC/MS Society UK |
Organisation | UK Regenerative Medicine Platform |
Sector | Academic/University |
Country | United Kingdom |
Start | 12/2019 |
End | 12/2022 |
Description | Edinburgh DRI hub |
Amount | £20,000,000 (GBP) |
Organisation | UK Dementia Research Institute |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 04/2023 |
End | 04/2028 |
Description | How does oligodendrocyte transcriptional heterogeneity change biological function? |
Amount | £625,951 (GBP) |
Funding ID | BB/X002799/1 |
Organisation | United Kingdom Research and Innovation |
Sector | Public |
Country | United Kingdom |
Start | 06/2023 |
End | 06/2026 |
Description | MS Centre |
Amount | £1,850,000 (GBP) |
Organisation | Multiple Sclerosis Society |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 01/2021 |
End | 12/2025 |
Description | Roche |
Amount | SFr. 900,000 (CHF) |
Organisation | F. Hoffmann-La Roche AG |
Sector | Private |
Country | Global |
Start | 12/2017 |
End | 11/2019 |
Description | Roche postdoctoral fellowship |
Amount | £300,000 (GBP) |
Organisation | F. Hoffmann-La Roche AG |
Sector | Private |
Country | Global |
Start | 01/2020 |
End | 01/2022 |
Title | snRNAseq MS |
Description | snRNAseq dataset for MS and control brain tissue |
Type Of Material | Database/Collection of data |
Year Produced | 2019 |
Provided To Others? | Yes |
Impact | Use in other papers Also in GEO |
URL | https://ki.se/en/mbb/oligointernode |
Description | Goncalo Castelo-Branco |
Organisation | Karolinska Institute |
Country | Sweden |
Sector | Academic/University |
PI Contribution | Biological input for snRNASeq on MS tissue, plus tissue. |
Collaborator Contribution | Bioinformatic input to the same |
Impact | 2 publications 2 grants - HCA and CZI |
Start Year | 2016 |
Description | Robin Franklin, University of Cambridge |
Organisation | University of Cambridge |
Department | Cambridge Stem Cell Institute |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | We have a post doc together. Most work will be done in Edinburgh. |
Collaborator Contribution | Training in spinal cord surgery to be done in Cambridge and use of a transgenic mouse in Cambridge. |
Impact | We will generate cell lines, but these are not yet finished. |
Start Year | 2017 |
Description | BBC Radio 4 broadcast |
Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Public/other audiences |
Results and Impact | BBC radio 4 programme on MS with Caroline Wyatt |
Year(s) Of Engagement Activity | 2019 |
Description | Firhill school |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Schools |
Results and Impact | Talk to Advanced higher biology pupils from Firrhill High School, October 2019 (school, ~20 pupils) |
Year(s) Of Engagement Activity | 2019 |
Description | Interview BBC scotland |
Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Media (as a channel to the public) |
Results and Impact | Interview for MS Centre status re-awarded. Interest from patients, general public |
Year(s) Of Engagement Activity | 2021 |
Description | MS Society UK Ambassador |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Public/other audiences |
Results and Impact | Made ambassador. Spoke on panel at MS Society annual meeting and Women in science dinner |
Year(s) Of Engagement Activity | 2019 |
Description | MS society visit stirling |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Patients, carers and/or patient groups |
Results and Impact | MS society UK day meeting for people with MS and carers |
Year(s) Of Engagement Activity | 2022 |
Description | MS supporters visit to institute |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Patients, carers and/or patient groups |
Results and Impact | Visit of supporters to institute for tour/chat |
Year(s) Of Engagement Activity | 2023 |
Description | Portraits of the brain |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Patients, carers and/or patient groups |
Results and Impact | Art activities between patients and researchers to better understand MS over a period of 2 months |
Year(s) Of Engagement Activity | 2018 |
URL | http://temp.crm.ed.ac.uk/seminars/portraits-brain |
Description | STOPMS panel |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Patients, carers and/or patient groups |
Results and Impact | Panel discussion for STOPMS campaign |
Year(s) Of Engagement Activity | 2020 |
Description | Scottish parliament |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Policymakers/politicians |
Results and Impact | MS awareness week 2019 Event at the Scottish Parliament Informal talk about cellular ageing and multiple sclerosis with people living with multiple sclerosis, other scientists and politicians. (~120 people) |
Year(s) Of Engagement Activity | 2019 |
Description | Wonderful world of work |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Schools |
Results and Impact | Wonderful World of Work, June 2019 Together with two other scientists I organised a public engagement event at Tynewater Primary School. We spoke with pupils (P1- P4) about what research is and engaged them in practical experiments such as pipetting and working with a microscope to investigate insects. (120 pupils) |
Year(s) Of Engagement Activity | 2019 |
Description | interSci |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Public/other audiences |
Results and Impact | InterSci Grassmarket, October 2019: Members of the Grassmarket community include vulnerable adults, people with disabilities, people who are unemployed and retired people. |
Year(s) Of Engagement Activity | 2019 |