Managing biodiversity and trophic cascades to enhance forest functioning and restoration
Lead Research Organisation:
University of Bristol
Department Name: Biological Sciences
Abstract
How will declining global biodiversity affect the maintenance of self-sustaining ecosystems and quality of human life? There is an urgent need to address this question in order to predict and therefore mitigate the consequences of human-driven changes to the natural world. Forests are an ideal setting in which to investigate this environmental challenge because they are hugely important reservoirs of biodiversity and provide many ecosystem services upon which humanity relies, such as the provision of food, soil security and the capture and storage of CO2. Furthermore, because of the importance of forests as homes for many of Earth's species and the ability of trees to remove carbon from the air, reforesting vast areas of land is a key strategy in reversing declines in biodiversity as well as the mitigation of climate change. In light of this, international initiatives have pledged to establish forests on a land area almost half the size of Australia by 2030 and the UK government is committed to planting 11 million trees in the UK by 2022.
Soil invertebrates and microbes are vitally important for carbon sequestration because of their key role in carbon and nutrient cycling, which underpin seedling establishment and tree growth. We know that ecosystems with a greater variety of above-ground vegetation species are more productive and capture more carbon, but we don't know how diversity in below ground communities effects these biodiversity-ecosystem productivity relationships. Furthermore, there remain gaps in our understanding of how current increases in deer and elk populations across Europe will influence soil biotic communities and the functioning and regrowth of forest ecosystems. Therefore, forest restoration initiatives that affect huge areas of the Earth's surface are being implemented without the necessary ecological knowledge to most effectively realise conservation and societal goals.
To redress these gaps in our understanding, my research aims to: i) determine how the diversity of complex below-ground communities affects carbon and nutrient cycling, tree growth and regeneration; and 2) quantify how large mammalian herbivores affect above and below-ground biotic communities, ecosystem processes and forest restoration.
Soil communities are extremely complex and diverse, with millions of species and billions of individuals living within a single ecosystem. However, because life in soil is so small and numerous, studying below-ground food webs is extremely challenging and time consuming. Therefore, an important outcome of this work will be the use of cutting-edge genetic sequencing techniques to determine, for the first time, how the diversity of these difficult to study organisms influences carbon sequestration and therefore climate change mitigation strategies. Furthermore, I will establish a mammal exclusion experiment across a broad range of forest types and climates in Europe, to investigate above and below-ground responses to the cessation of browsing. This will help us to understand how changes in browsing by large mammals affects forest regeneration and soil processes, and will form the basis of a long-term, large-scale field experiment, which will be extremely valuable for future studies aimed at understanding how ecosystems work.
Together, my research will help us to: 1) understand and mitigate the consequences of declines in global biodiversity for the ecosystem services that support humanity; and 2) generate data that will help manage the restoration of forests to reverse the decline in biodiversity and help mitigate global warming. The erosion of biodiversity represents a great loss to all those who are captivated by the intricacy of ecological interactions; my work will increase our ability to describe these complexities, and in doing so, deepen our understanding of the ways in which we are unravelling the natural world.
Soil invertebrates and microbes are vitally important for carbon sequestration because of their key role in carbon and nutrient cycling, which underpin seedling establishment and tree growth. We know that ecosystems with a greater variety of above-ground vegetation species are more productive and capture more carbon, but we don't know how diversity in below ground communities effects these biodiversity-ecosystem productivity relationships. Furthermore, there remain gaps in our understanding of how current increases in deer and elk populations across Europe will influence soil biotic communities and the functioning and regrowth of forest ecosystems. Therefore, forest restoration initiatives that affect huge areas of the Earth's surface are being implemented without the necessary ecological knowledge to most effectively realise conservation and societal goals.
To redress these gaps in our understanding, my research aims to: i) determine how the diversity of complex below-ground communities affects carbon and nutrient cycling, tree growth and regeneration; and 2) quantify how large mammalian herbivores affect above and below-ground biotic communities, ecosystem processes and forest restoration.
Soil communities are extremely complex and diverse, with millions of species and billions of individuals living within a single ecosystem. However, because life in soil is so small and numerous, studying below-ground food webs is extremely challenging and time consuming. Therefore, an important outcome of this work will be the use of cutting-edge genetic sequencing techniques to determine, for the first time, how the diversity of these difficult to study organisms influences carbon sequestration and therefore climate change mitigation strategies. Furthermore, I will establish a mammal exclusion experiment across a broad range of forest types and climates in Europe, to investigate above and below-ground responses to the cessation of browsing. This will help us to understand how changes in browsing by large mammals affects forest regeneration and soil processes, and will form the basis of a long-term, large-scale field experiment, which will be extremely valuable for future studies aimed at understanding how ecosystems work.
Together, my research will help us to: 1) understand and mitigate the consequences of declines in global biodiversity for the ecosystem services that support humanity; and 2) generate data that will help manage the restoration of forests to reverse the decline in biodiversity and help mitigate global warming. The erosion of biodiversity represents a great loss to all those who are captivated by the intricacy of ecological interactions; my work will increase our ability to describe these complexities, and in doing so, deepen our understanding of the ways in which we are unravelling the natural world.
Planned Impact
This work will improve understanding of how diversity in soil biotic communities affects ecosystem functioning in forests and the growth and regeneration of trees. It will therefore be beneficial to a broad range of disciplines, including the wider ecological community such as those working to understand how biodiversity influences the functioning of natural systems, and scientists focused on the consequences of species losses for the provision of ecosystem services and goods upon which humanity relies. Furthermore, this research will be of interest to macoecologists because I will generate data on continental patterns in below-ground diversity at an unprecedented level of detail and spatial scale, which will be useful for interrogating biogeographical theory on species occurrence and distribution. I will provide much-needed empirical evidence of the ecosystem-wide consequences of common land-management strategies for forest restoration and expansion: mammal exclusion to promote tree seedling establishment. Given that these practices are currently being put in place without a rigorous knowledge base of the effects on above and below ground invertebrates and microbes, and associated processes, researchers working in the fields of restoration and conservation biology will benefit from the outputs of my research. Similarly, my work will be of interest to scientists in any field of forest ecology because I will improve our fundamental understanding of the processes that maintain forest ecosystems. Academics working within taxonomy, bioinformatics, entomology and Earth System modelling will also benefit from the outcomes of this work because I will provide new genetic, morphology and distributional data on under-represented taxonomic groups. Furthermore, this project will generate detailed information about the factors that drive C storage and release from forest ecosystems, witch are increasing in area across the Northern Hemisphere and as such, the data will be useful for improvement of the accuracy of Earth System Models.
Woodland conservation, restoration and expansion are high on environmental policy agendas and have been featured as priorities on a number of resent UK and EU policy documents (e.g. The UK's "A Green Future: Our 25 Year Plan to improve the Environment", 2018; The Forestry Commission's "Government supported new planting of trees in England; report for 2017-2018"; The EU's "Protecting and restoring the world's forests: stepping up EU action to halt deforestation and forest degradation", 2019). Therefore, outputs from this work will be useful to land managers and conservation practitioners who are responsible for carrying out Government and independent initiatives to project and restore forests, e.g. The Woodland Trust and Natural England (see Letters of Support) as well as environmental policy makers because I will facilitate woodland expansion initiatives by improving our understanding of the biotic factors that drive tree growth and regeneration.
The outcomes of this work will benefit the general public through helping to improve the management of our natural environment, which will increase human quality of life. My research will deepen our fundamental understanding of the role of biological diversity for the provision of ecosystem processes and services, and will therefore add to our basic knowledge how Earth functions and could have far reaching effects on human society if used as evidence to help protect and restore natural ecosystems and prevent further declines in biodiversity. Through sustained efforts to engage in outreach events (see Pathways to Impact) my work will be of benefit to women in science. I will lead by example and make my work accessible to the general public and to children and young adults in particular, which will demonstrate to young women that a career in science is a possibility for them.
Woodland conservation, restoration and expansion are high on environmental policy agendas and have been featured as priorities on a number of resent UK and EU policy documents (e.g. The UK's "A Green Future: Our 25 Year Plan to improve the Environment", 2018; The Forestry Commission's "Government supported new planting of trees in England; report for 2017-2018"; The EU's "Protecting and restoring the world's forests: stepping up EU action to halt deforestation and forest degradation", 2019). Therefore, outputs from this work will be useful to land managers and conservation practitioners who are responsible for carrying out Government and independent initiatives to project and restore forests, e.g. The Woodland Trust and Natural England (see Letters of Support) as well as environmental policy makers because I will facilitate woodland expansion initiatives by improving our understanding of the biotic factors that drive tree growth and regeneration.
The outcomes of this work will benefit the general public through helping to improve the management of our natural environment, which will increase human quality of life. My research will deepen our fundamental understanding of the role of biological diversity for the provision of ecosystem processes and services, and will therefore add to our basic knowledge how Earth functions and could have far reaching effects on human society if used as evidence to help protect and restore natural ecosystems and prevent further declines in biodiversity. Through sustained efforts to engage in outreach events (see Pathways to Impact) my work will be of benefit to women in science. I will lead by example and make my work accessible to the general public and to children and young adults in particular, which will demonstrate to young women that a career in science is a possibility for them.
Organisations
- University of Bristol (Lead Research Organisation)
- Lancaster University (Collaboration)
- Woodland Trust (Collaboration)
- University of Bristol (Collaboration)
- Netherlands Institute of Ecology (Collaboration)
- Norwegian University of Science and Technology (NTNU) (Collaboration)
- UNIVERSITY OF MANCHESTER (Collaboration)
- Free University of Amsterdam (Collaboration)
- ABERYSTWYTH UNIVERSITY (Collaboration)
- Albert Ludwig University of Freiburg (Collaboration)
- Wageningen University & Research (Collaboration)
- UNIVERSITY OF SHEFFIELD (Collaboration)
- The Natural History Museum (Project Partner)
- University of Sheffield (Project Partner)
- Wageningen University (Project Partner)
- Netherlands Inst of Ecology NIOO KNAW (Project Partner)
- Free (VU) University of Amsterdam (Project Partner)
- University of Freiburg (Project Partner)
- Lancaster University (Project Partner)
Publications

Cerullo G
(2023)
Sparing old-growth maximises conservation outcomes within selectively logged Amazonian rainforest
in Biological Conservation

Griffiths HM
(2021)
The impact of invertebrate decomposers on plants and soil.
in The New phytologist

Zanne A
(2022)
Termite sensitivity to temperature affects global wood decay rates
in Science
Description | Bristol Centre for Agricultural Innovation |
Amount | £37,066 (GBP) |
Funding ID | 1663387 |
Organisation | University of Bristol |
Sector | Academic/University |
Country | United Kingdom |
Start | 03/2022 |
End | 03/2023 |
Description | GW4+ PhD studentship |
Amount | £110,000 (GBP) |
Organisation | Natural Environment Research Council |
Sector | Public |
Country | United Kingdom |
Start | 09/2023 |
End | 04/2027 |
Description | Understanding the drivers of wood decay in European forests - NERC NEIF |
Amount | £30,825 (GBP) |
Funding ID | 2547.1022 |
Organisation | Natural Environment Research Council |
Sector | Public |
Country | United Kingdom |
Start | 02/2023 |
End | 02/2024 |
Description | University of Bristol PhD studentship |
Amount | £360,000 (GBP) |
Organisation | University of Bristol |
Sector | Academic/University |
Country | United Kingdom |
Start | 03/2022 |
End | 03/2026 |
Title | Five-yearly growth rate for 15000 trees across the FunDiv network (15000 trees, 209 plots 6 countries) |
Description | We have re-measured every tree (approx 15000 individuals) across the FunDiv network of forest plots to quantify the 5-yearly growth rate and productivity of these permanent forest plots and contribute to the tree growth data dating back to 2011 |
Type Of Material | Database/Collection of data |
Year Produced | 2022 |
Provided To Others? | No |
Impact | This dataset will be used extensively to answer one of the main objectives within my FLF |
Description | Collaboration with Dr Andrew Jarivs |
Organisation | Lancaster University |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | I reached out to Dr Jarivs in 2019 when I was planning my fellowship proposal. I have shared my ideas and plans with him and we have discussed the work that will be carried out. His formal involvement in the work began when the award started, in 2021. |
Collaborator Contribution | Dr Jarvis has been helping in the planning and design of my work. We have had regular online meetings and he had read and contributed to my proposal. He has advised on the application of my data for carbon and earth system modelling. Him and relevant members of his team will contribute and be co-authors on resultant publications. |
Impact | None yet - we are the beginning of a field-based project so data take a long time to gather. |
Start Year | 2021 |
Description | Collaboration with Dr Jakob Vinter |
Organisation | University of Bristol |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | I have contributed to Jakob's student supervision/assisted in the experimental design of a new study Jakob and his group are setting up. I have also been included as a co-I on a large NERC grant that Jakob led and has recently submitted. I am contributing expertise in soil faunal contribution to ecosystem processes. |
Collaborator Contribution | So far, Jakob hasn't contributed directly to our partnership |
Impact | My inclusion on a NERC large grant, submitted in March 2024 |
Start Year | 2024 |
Description | Collaboration with Dr James Speed |
Organisation | Norwegian University of Science and Technology (NTNU) |
Country | Norway |
Sector | Academic/University |
PI Contribution | Dr James Speed and I have formed linked over a shared interest in mammal effects on forest ecosystems. I am contributing to a Norwegian Research Council grant and a co-investigator bringing expertise in soil food web ecology |
Collaborator Contribution | Dr Speed is assisting us in allowing us access to his experimental plots in Norway. He visited our research group in Bristol to give a research seminar in October 2023 |
Impact | No outputs yet, but James has given an in person seminar to our research group in Bristol and I have been included as a co-investigator on a Norwegian Research Council grant |
Start Year | 2023 |
Description | Collaboration with Dr Stephan Geisen |
Organisation | Wageningen University & Research |
Country | Netherlands |
Sector | Academic/University |
PI Contribution | I reached out to Dr Geisen in 2019 when I was planning my fellowship proposal. He has helped and advised me on the molecular aspect of the project. I have shared my ideas and plans with him and we have discussed the work that will be carried out. His formal involvement in the work began when the award started, in 2021. |
Collaborator Contribution | Dr Geisen has been helping in the planning and design of my work. We have had regular online meetings and he had read and contributed to my proposal. My research group will use his lab facilities for some of the planned analysis in the project. Him and relevant members of his team will contribute and be co-authors on resultant publications. |
Impact | None yet - we are the beginning of a field-based project so data take a long time to gather. |
Start Year | 2021 |
Description | Collaboration with Prof Michael Scherer-Lorenzen |
Organisation | Albert Ludwig University of Freiburg |
Country | Germany |
Sector | Academic/University |
PI Contribution | I reached out to Prof Scherer-Lorenzen when I began planning my fellowship work. Prof Scherer-Lorenzen is the project lead of the FunDiv network of forest plots. He coordinates research activities across the network. I have been in regular communication with Prof Scherer-Lorenzen since 2019 to keep him in the loop and plan research activities across the sites |
Collaborator Contribution | Prof Scherer-Lorenzen has been actively engaged in the planning of all parts of my fellowship research - reading and commenting on the proposal, helping with protocol design, and more recently, setting up experimental plots in Germany. |
Impact | As yet there are no outcomes because we are in the early stages of a field investigation. |
Start Year | 2021 |
Description | Collaboration with Professor Dave Johnson |
Organisation | University of Manchester |
Department | Faculty of Life Sciences |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | We are working with Dave to develop our ideas and methodological approach for our 13C pulse chase experiments |
Collaborator Contribution | Dave is providing technical support, training on instruments in his lab, calibration with an instrument in my lab so that they can be a shared resource, lab space and expertise. We are meeting regularly to develop research questions and design experimental approaches in stable isotope tracing to follow C through the plant-soil system. We will carry out a pilot study this year in the lab to develop approaches for a field experiment next year. |
Impact | None yet, but Dave will be a co-author on pulse chase papers we produce |
Start Year | 2021 |
Description | Collaboration with Professor Gareth Griffith |
Organisation | Aberystwyth University |
Department | Institute of Biological, Environmental and Rural Sciences (IBERS) |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | I have visited Prof Griffith' research team and gave a seminar at their departmental seminar series. |
Collaborator Contribution | My group and I spend the day with Prof Griffith discussing molecular approaches to describe soil food webs and the possibility of working with his group to develop our DNA extraction and sequencing methodology |
Impact | Non yet, but we will coauthor papers together when the molecular work is complete |
Start Year | 2022 |
Description | Collaboration with Professor Matty Berg |
Organisation | Free University of Amsterdam |
Country | Netherlands |
Sector | Academic/University |
PI Contribution | I reached out to Prof Berg in 2019 when I was planning my fellowship proposal. I have shared my ideas and plans with him and we have discussed the work that will be carried out. |
Collaborator Contribution | Prof Berg has been helping in the planning and design of my work. We have had regular online meetings and he had read and contributed to my proposal. |
Impact | None yet - we are in the beginning phase of a field project so data have not yet been collected or analysed. |
Start Year | 2021 |
Description | Collaboration with Professor Sue Hartley |
Organisation | University of Sheffield |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | I reached out to Prof Hartley in 2019 when I was planning my fellowship proposal. I have shared my ideas and plans with him and we have discussed the work that will be carried out. Her formal involvement in the work began when the award started, in 2021. |
Collaborator Contribution | Prof Hartley has been helping in the planning and design of my work. We have had regular online meetings and she had read and contributed to my proposal. She has helped me develop the methods for the herbivory aspect of the work. Her and relevant members of her team will contribute and be co-authors on resultant publications. |
Impact | None yet - we are the beginning of a field-based project so data take a long time to gather. |
Start Year | 2021 |
Description | Collaboration with Professor Wim van der Putten |
Organisation | Netherlands Institute of Ecology |
Country | Netherlands |
Sector | Charity/Non Profit |
PI Contribution | I reached out to Prof van der Putten in 2019 when I was planning my fellowship proposal. I have shared my ideas and plans with him and we have discussed the work that will be carried out. His formal involvement in the work began when the award started, in 2021. |
Collaborator Contribution | Prof van der Putten has been helping in the planning and design of my work. In particular in the molecular work. He has read and contributed to my proposal. My research group will use his lab facilities for some of the planned analysis in the project and he will train me and members of my team in molecular methods and nematode morphology and taxonomy. Him and relevant members of his team will contribute and be co-authors on resultant publications. |
Impact | None yet - we are the beginning of a field-based project so data take a long time to gather. |
Start Year | 2021 |
Description | The Woodland Trust |
Organisation | Woodland Trust |
Country | United Kingdom |
Sector | Charity/Non Profit |
PI Contribution | We have developed ideas together to better understand management practices and their impact on woodland conservation success (forest structure, carbon storage potential, biodiversity) |
Collaborator Contribution | Parters at the Woodland Trust have given a huge amount of time discussing possibilities for our experimental work, they have walked us round potential sites and have provided woodland field locations (at no cost) for us to carry out our experiments. We will also be constructing fences around some forest plots on their sites to assess the impact of large herbivores on forest functioning (a major objective of my FLF) |
Impact | This collaboration has potential to have impact in policy and public services though informing best woodland conservation practise. This will be realised when we start gathering data post fence construction to assess the impact of mammalian herbivores on forest biota and functioning |
Start Year | 2021 |