Tracking Haulage in East Africa to support COVID-19 surveillance- THEA-C19
Lead Research Organisation:
University of Edinburgh
Department Name: The Roslin Institute
Abstract
On the 13th of June, a haulage truck driver was found dead in the 32-kilometre queue of trucks at the Busia border between Uganda and Kenya. This bottleneck in regional supply chain is caused by mandatory COVID-19 testing, whose results take 14-26 hours. Waiting for test results not only represents an increased risk in COVID-19 transmission to communities but also outbreak of water borne and food borne diseases. Critically, such delays in the supply of goods and medicines for land locked countries further threaten the health and wellbeing of these populations.
To mitigate this problem, the Ministry of Health of Uganda proposes to test and allow drivers continue with journeys, however, this would require a quicker approach of tracing drivers who test positive, and profile their attributable transmission risk.
To address this limitation, we propose to develop and test digital contact tracing technology tailored to the haulage industry. This approach provides a unique opportunity to harness the input of users, characteristics of the haulage sector, support of government, technology firms and academia to maximise uptake and utility of such tools in a developing country context. Critically the tool will be open source, which allows for simultaneous testing of its utility in
other parts of the world. In Uganda, the technology will provide the Ministry of health information on location, an alert system for cases, at-risk drivers as well as expected volume of traffic at checkpoints. This strengthens public health responses to COVID-19 and improves regional flow of supply chain
To mitigate this problem, the Ministry of Health of Uganda proposes to test and allow drivers continue with journeys, however, this would require a quicker approach of tracing drivers who test positive, and profile their attributable transmission risk.
To address this limitation, we propose to develop and test digital contact tracing technology tailored to the haulage industry. This approach provides a unique opportunity to harness the input of users, characteristics of the haulage sector, support of government, technology firms and academia to maximise uptake and utility of such tools in a developing country context. Critically the tool will be open source, which allows for simultaneous testing of its utility in
other parts of the world. In Uganda, the technology will provide the Ministry of health information on location, an alert system for cases, at-risk drivers as well as expected volume of traffic at checkpoints. This strengthens public health responses to COVID-19 and improves regional flow of supply chain
Technical Summary
The goal of contact tracing is to identify COVID-19 cases and their recent contacts then have them isolated to break the virus transmission chain. In Uganda, 68% of 1265 cases are haulage truck drivers and the control of transmission from this group has been through mandatory COVID-19 testing at the borders.
However, this requires drivers to wait for a result, causing a 7-15 day delay in the regional supply chain for the landlocked countries.
To mitigate this, the ministry of health proposes to allow drivers to continue with the journeys pending results, however, this requires a rapid approach for tracing positive cases. From the ministry's reports, it is evident that such an approach must pay critical attention to a distinct transmission profile i.e. from regional to local haulage drivers who are introducing the virus into communities.
To fill this gap, we propose to develop and test a digital contact tracing tool. The novelty here is in its enhanced privacy using a unique universal identifier (UUID), digital tracking boundary defined by the road infrastructure and simplicity based on conventional time-stamped GPS.
The mobile application will be open source, which means it can simultaneously be tested by other parts of the world thereby contributing to its robustness. In Uganda, all stakeholders support it's development and deployment, which ensures uptake. Ultimately, this technology will dramatically increase the speed and efficiency of tracing of cases (drivers) and contacts, which reduces spread into communities in the region as well as improve flow of the regional supply chain.
However, this requires drivers to wait for a result, causing a 7-15 day delay in the regional supply chain for the landlocked countries.
To mitigate this, the ministry of health proposes to allow drivers to continue with the journeys pending results, however, this requires a rapid approach for tracing positive cases. From the ministry's reports, it is evident that such an approach must pay critical attention to a distinct transmission profile i.e. from regional to local haulage drivers who are introducing the virus into communities.
To fill this gap, we propose to develop and test a digital contact tracing tool. The novelty here is in its enhanced privacy using a unique universal identifier (UUID), digital tracking boundary defined by the road infrastructure and simplicity based on conventional time-stamped GPS.
The mobile application will be open source, which means it can simultaneously be tested by other parts of the world thereby contributing to its robustness. In Uganda, all stakeholders support it's development and deployment, which ensures uptake. Ultimately, this technology will dramatically increase the speed and efficiency of tracing of cases (drivers) and contacts, which reduces spread into communities in the region as well as improve flow of the regional supply chain.
Publications
Callaby R
(2020)
Genetic Diversity of Cameroon Cattle and a Putative Genomic Map for Resistance to Bovine Tuberculosis.
in Frontiers in genetics
González Gordon L
(2022)
A scoping review of foot-and-mouth disease risk, based on spatial and spatio-temporal analysis of outbreaks in endemic settings.
in Transboundary and emerging diseases
González-Gordon L
(2023)
Identifying target areas for risk-based surveillance and control of transboundary animal diseases: a seasonal analysis of slaughter and live-trade cattle movements in Uganda.
in Scientific reports
Kalanzi D
(2022)
Microbial characteristics of dental caries in HIV positive individuals.
in Frontiers in oral health
Kateete DP
(2021)
Sputum microbiota profiles of treatment-naïve TB patients in Uganda before and during first-line therapy.
in Scientific reports
Loosli K
(2021)
Addressing antimicrobial resistance by improving access and quality of care-A review of the literature from East Africa.
in PLoS neglected tropical diseases
Mayanja R
(2023)
Source-tracking ESBL-producing bacteria at the maternity ward of Mulago hospital, Uganda.
in PloS one
Mugerwa I
(2021)
Antimicrobial Resistance Situational Analysis 2019-2020: Design and Performance for Human Health Surveillance in Uganda.
in Tropical medicine and infectious disease
Description | This project will end at the end of March 2023, we have worked on four pillars of the projects including A) Consultative software development for the digital contact tracing tool B) Ethics and Social anthropological dimension of of digital tools for public health C) Testing the tool on 7000 truck driver on the East African haulage network through Uganda D) Modelling the role of truck drivers in the COVID-19 pandemic in Uganda |
Exploitation Route | We intend to apply to BBSRC responsive mode later this year to adapt this tool for the livestock sector, to track and digitise animal movements as part of disease control |
Sectors | Agriculture, Food and Drink,Digital/Communication/Information Technologies (including Software),Healthcare,Transport |
URL | https://genopaths.africa |
Description | This tools is now integrated into Uganda's health informatics and currently adopted to support sentinel sample tracking as part of the national surveillance |
First Year Of Impact | 2023 |
Sector | Digital/Communication/Information Technologies (including Software),Healthcare |
Impact Types | Policy & public services |
Description | Expert group for the National Integrated Sentinel Surveillance(NISS) in Uganda |
Geographic Reach | Africa |
Policy Influence Type | Participation in a guidance/advisory committee |
Impact | This is yet to be realised |
Description | Supporting digital contact tracing and early warning for COVID-19 |
Geographic Reach | National |
Policy Influence Type | Implementation circular/rapid advice/letter to e.g. Ministry of Health |
Impact | The tool allows for digital contact tracing without the need pf public health and security tracking down truck drivers. This process was extremely stressful for truck drivers especially during the second and third wave of the pandemic. It should also save the ministry of Health money as contact tracing was one of the components with the largest budget during the first COVID-19 wave |
Description | Tracking Haulage in East Africa to support COVID-19 surveillace |
Organisation | Makerere University |
Country | Uganda |
Sector | Academic/University |
PI Contribution | I am the Principal investigator |
Collaborator Contribution | Co- Principal Investigator |
Impact | Still early staged of the project |
Start Year | 2020 |
Description | Tracking Haulage in East Africa to support COVID-19 surveillace |
Organisation | University of Edinburgh |
Department | School of Informatics Edinburgh |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | I am the Principal investigator |
Collaborator Contribution | Co- Principal Investigator |
Impact | Still early staged of the project |
Start Year | 2020 |
Title | A pilot for digital one health in Uganda |
Description | We have a developed a prototype system that allows integration of one health data at the point of capture without violating ethical boundaries in human health, Veterinary and Environmental health. The system creates data as a shared resource for one health decision making. We are piloting this with regards to AMR surveillance. We have just received seed funding the Royal Society reference RGS\R1\231137 |
Type | Support Tool - For Fundamental Research |
Current Stage Of Development | Initial development |
Year Development Stage Completed | 2023 |
Development Status | Actively seeking support |
Impact | This is still work in progress, we can report more next year |
URL | https://genopaths.africa |
Title | Covid-19 track and trace system tailored for haulage in East Africa |
Description | Project-THEA aims to deliver an open access mobile application to support track and trace tailored to the haulage industry. The tool is designed to combine anonymized time-stamped geo-location information relative to the road infrastructure with COVID-19 test results, to not only support public health efforts to limit transmission but also the safe reopening of economies. Critically the efficiency in track and trace enhances the flow of the regional supply chain as well as strategic allocation of public health surveillance resources. NB: The tool is open access but the data access is limited to public health institutions. This way its use is not limited to East Africa. |
Type Of Technology | Webtool/Application |
Year Produced | 2021 |
Open Source License? | Yes |
Impact | The technology is still under implementation. |
URL | https://project-thea.org |
Title | Digital one health for AMR surveillance in Africa |
Description | This is a digital platform to enable one heath pathogen surveillance, it supports metadata capture and integration at point of capture, analysis, sharing and archiving of surveillance data at the one health interface |
Type Of Technology | Software |
Year Produced | 2022 |
Open Source License? | Yes |
Impact | This is still in development, it a prototype that we are starting to develop with pilot funding and free time in put |
URL | https://genopaths.africa |
Title | THEA-trucker |
Description | This is a mobile application for digital contact tracing tailored to haulage in East Africa https://play.google.com/store/apps/details?id=com.theatrucker |
Type Of Technology | Software |
Year Produced | 2021 |
Open Source License? | Yes |
Impact | This is the second version of the software, with the final version due in May 2022. The publication relating to this tool is under review in BMJ protocol |
Description | Public engagement activities with Truck drivers on the use of digital contact tracing for COVID-19 |
Form Of Engagement Activity | A formal working group, expert panel or dialogue |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Industry/Business |
Results and Impact | Digital contact tracing is a new concept in Uganda and region at at large so we had to create awareness and also get feed back on the fears the end user would have. In August 2021, the THEA team organized a stake holder's workshop that brought together experts from different fields to share knowledge and experiences regarding the implementation, the ethical and legal implications of using a mobile surveillance tool. This was followed by a number of consultative meetings with key players in the haulage sector but also with officials in the Ministry of Health (Uganda). By so doing, we aimed at developing a tool that would be able to respond to the needs of the community (truck drivers) yet better still solving a prevailing problem in the health sector. It is from these interactions that we have been able to get more ideas that necessitated modifications to the tool to appeal to the different stake holders. This has however taken a little more time than we anticipated, getting all on board to appreciate this great innovation. Consequently, we are still in consultation here and there before we officially pilot the study. The THEA team has diversified its focus to include private truck owners; who were found to be more receptive and much more organized as compared to the union itself. Please see link https://project-thea.org/blog.html?article=3 |
Year(s) Of Engagement Activity | 2020,2021 |
URL | https://project-thea.org/blog.html?article=3 |
Description | Support COVID-19 vaccination campaign for Truck drivers |
Form Of Engagement Activity | Participation in an open day or visit at my research institution |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Vaccination is a critical tool for the control of COVID-19, our engagement with truck drivers revealed that they were not keen on lining up with the general public as this took a lot of time which they did not have given their routine. This is why few of them had been vaccinated; we then requested the Ministry of Health to conduct a mobile vaccination drive to bring this service directly to the truck drivers. This would allow us to contribute to rapid control of this disease and recruit drivers for the trial. We are glad to report that these efforts have allowed the vaccination of 1800 drivers and their close relations to date. We anticipate extending this to various POEs would help vaccinate up to 10,000. https://project-thea.org/blog.html?article=4 |
Year(s) Of Engagement Activity | 2021 |
URL | https://project-thea.org/blog.html?article=4 |