Translating potent SARS-Cov-2 neutralising nanobodies from the lab to the clinic
Lead Research Organisation:
Rosalind Franklin Institute
Department Name: Research
Abstract
There is currently no cure for Covid-19. However, treatment with antibodies that block SARS-CoV2 from infecting cells may halt or ameliorate disease. We have produced very potent mini-antibodies or nanobodies that neutralise the virus in "test-tube" experiments with 100 % efficiency. The small size and stability of the nanobodies make them candidates for direct delivery into the lungs using a nebuliser device with the idea of rapidly reducing infection in the airways. The highly neutralising SARS-Cov2 nanobodies that we have generated are ready for animal tests. Successful demonstration of activity in animals will be the key step to developing this novel way of treating Covid19 with antibodies.
Technical Summary
We have identified multiple single domain antibodies (nanobodies) that neutralise live SARS-CoV-2 virus with picomolar efficacy in vitro. Working with Public Health England and the Department of Infection Biology, University of Liverpool, we will test the efficacy of these neutralising nanobodies in a hamster model of mild to moderate disease with the prospect of developing a novel nanobody-based medicine for the treatment for Covid19.
Nanobodies are single domain antibodies comprising the variable region of a subset of heavy chain only antibodies from camelids. A nanobody is around 120 residues in length (~ 15 kD) and can access epitopes not normally seen by the human immune system. The variable gene sequences of camelids are similar to human and it has been proposed that nanobodies are less likely to be immunogenic than antibodies of other species. The relatively small size and stability of nanobodies gives them a unique advantage over human antibodies, which must be injected or given IV, nanobodies can be given as direct aerosolised delivery to the patient. Such an easy to administer and cheap therapy would transform the outlook for covid19. By the end of the project we aim to have established whether a neutralising nanobody to SARS- Cov2 is effective in an animal model of Covid19 and in particular whether a therapeutic / prophylactic dose can be delivered by nasal administration. In parallel the potential of candidate nanobodies to elicit virus escape mutants will be assessed.
Nanobodies are single domain antibodies comprising the variable region of a subset of heavy chain only antibodies from camelids. A nanobody is around 120 residues in length (~ 15 kD) and can access epitopes not normally seen by the human immune system. The variable gene sequences of camelids are similar to human and it has been proposed that nanobodies are less likely to be immunogenic than antibodies of other species. The relatively small size and stability of nanobodies gives them a unique advantage over human antibodies, which must be injected or given IV, nanobodies can be given as direct aerosolised delivery to the patient. Such an easy to administer and cheap therapy would transform the outlook for covid19. By the end of the project we aim to have established whether a neutralising nanobody to SARS- Cov2 is effective in an animal model of Covid19 and in particular whether a therapeutic / prophylactic dose can be delivered by nasal administration. In parallel the potential of candidate nanobodies to elicit virus escape mutants will be assessed.
Publications

Hricovíni M
(2022)
Chemistry towards Biology-Instruct: Snapshot.
in International journal of molecular sciences

Huo J
(2020)
Neutralizing nanobodies bind SARS-CoV-2 spike RBD and block interaction with ACE2.
in Nature structural & molecular biology


Mikolajek H
(2022)
Correlation between the binding affinity and the conformational entropy of nanobody SARS-CoV-2 spike protein complexes.
in Proceedings of the National Academy of Sciences of the United States of America

Tang Q
(2021)
Structural Biology of Nanobodies against the Spike Protein of SARS-CoV-2.
in Viruses
Description | Nanobodies are small single domain antibodies derived from a unique type of antibody found in camels and llamas. We showed that nanobodies raised to the spike protein of the SARS-CoV-2 virus blocked the virus from entering cells and therefore prevented infection. Such agents have the potential to be developed as drugs for treating COVID-19. |
Exploitation Route | The project established proof of concept that anti-SARS-CoV2 single domain antibodies (nanobodies) could neutralise the virus in vitro and be administered via nasal route to block infection in vivo in an animal model of COVI-19. This appraoch could be applied to the treatment of other respiratory viruses. |
Sectors | Healthcare |
Description | The results from work funded in part by the grant have contributed to a patent filing: WO2022/053839 Single Domain Antibodies that target SARS-CoV-2. |
First Year Of Impact | 2000 |
Description | Preparing for disease X, the next pathogenic respiratory viruses: the development of cross-reactive nanobodies for diagnosis, prophylaxis and treatment of coronavirus infections |
Amount | £928,849 (GBP) |
Funding ID | 223733/Z/21/Z |
Organisation | Wellcome Trust |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start |
Description | Evaluation of SARS-Cov-2 nanobodies in Syrian Hamster model of Covid 19 |
Organisation | University of Liverpool |
Department | Institute of Infection and Global Health |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Expertise in the the identification, production and and characterisation of nanobody reagents for testing in vivo |
Collaborator Contribution | Expertise in Syrian Hamster model of Covid19 analysis of data including virology and histopathology. |
Impact | The collaboration is multi-discilionary combining , biochemistry, structural biology, virology and pharmacology. A the predict only begin 1/12/20 there are no outcomes that can beformally reported yet. |
Start Year | 2020 |
Description | Interview (Royal Institution Christmas lecture) |
Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Public/other audiences |
Results and Impact | Interviewed on COVID 19 and nanobodies part of the 2021 Royal Institution Christmas Lecture "Going viral- Part 3: fighting back" |
Year(s) Of Engagement Activity | 2021 |
URL | https://www.bbc.co.uk/iplayer/episode/m0012tzh/royal-institution-christmas-lectures-2021-3-fighting-... |
Description | Interviews |
Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Public/other audiences |
Results and Impact | Several interviews on local radio following publication of a press release on the Nature Comms article |
Year(s) Of Engagement Activity | 2021 |