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Delineating late foetal human lung development and maturation

Lead Research Organisation: UNIVERSITY COLLEGE LONDON
Department Name: Medicine

Abstract

Our understanding of how the lung develops is very poor. Addressing this is really important because we can work out how to help premature babies and how to regenerate lungs to help those with severe lung disease. End-stage lung disease of any cause is a major global health problem. On the other hand, the death rate and problems arising from premature birth are mostly caused by the fact that the lung is too immature or underdeveloped to function as opposed to in healthy term babies. This is despite the use of some treatments such as steroids which do not overcome the long-term effects of premature birth on lung function as an adult.

I have already made important discoveries to understand lung development. This was made using human embryonic and foetal lungs up to 20 weeks post-conception - notably I have developed a 3D culture system which can be used to study human lung development in a dish. My work also includes how immune cells interact with the developing lung using various, cutting edge molecular methods that can look at each cell individually. The period of development after 20 weeks to birth is virtually unexplored and is referred to as the "gap" in the scientific world. In close collaboration with obstetricians and other doctors at UCL, I have designed a way of receiving fresh healthy tissue from any organ from this crucial period of development during the final part of pregnancy.

My aims will be 1) to study how the lining of the lung matures, 2) to study how the immune system matures within the lung and also elsewhere in our body, 3) to study how blood vessels mature and how they interact with the lung lining to make a functioning gas exchange unit, allowing oxygen to be transported into the blood compartment and carbon dioxide to be transferred into the air compartment, and finally 4) to set up a late foetal tissue resource for the other research groups working on the maturation of other organs.

My overall objective is to study late stage foetal human lung development and maturation, which has the potential for wide-reaching impact on various fields, most notably to improve survival in premature babies and to find ways to reverse the effects of severe lung disease.

Technical Summary

End-stage lung disease is a major global health problem and understanding normal human lung development is an essential part of regenerative medicine. At the same time, the mortality and morbidity associated with prematurity is mostly caused by lung immaturity, despite the use of antenatal corticosteroids, which do not overcome the longterm effects of prematurity on lung function. I have made various important discoveries using human embryonic and foetal lungs up to 20 weeks post-conception - notably I have developed a genetically-modifiable organoid culture system which can be used to study human lung development in vitro. My work also includes developmental immunobiology in the lung using scRNAseq and novel approaches such as CITE-seq. The period of development after 20 weeks to birth is virtually unexplored and is referred to as the "gap". In close collaboration with obstetricians and histopathologists at UCL, I have designed a tractable way of receiving fresh healthy tissue from any organ from this crucial period of in utero development.

My aims are 1) to study late foetal epithelial maturation in the lung by scRNAseq, spatial transcriptomics and organoids in order to identify novel regulators in alveolar cell fate specification, 2) to study late foetal maturation of the immune system and whether the immune system in turn affects lung epithelial differentiation, 3) to study lung vascular maturation and the mechanism of endothelial-epithelial interactions to make a functioning gas exchange unit at the air-blood interface, and finally 4) to set up a late foetal tissue resource for the Human Cell Atlas, to facilitate functional work on other organs.

My overall objective is to delineate late foetal human lung development and maturation, which has the potential for wide-reaching impact on the whole field of lung developmental biology, lung regeneration and neonatal medicine.

Publications

10 25 50
 
Description Clinical Research Training Fellowship for Eliz Kilich
Amount £310,410 (GBP)
Funding ID MR/X019152/1 
Organisation Medical Research Council (MRC) 
Sector Public
Country United Kingdom
Start 09/2023 
End 09/2026
 
Description Dissecting the role of mechanical lung compression in Congenital Diaphragmatic Hernia on a single cell level
Amount £243,891 (GBP)
Funding ID V5021 
Organisation Great Ormond Street Hospital Children's Charity (GOSHCC) 
Sector Charity/Non Profit
Country United Kingdom
Start 07/2022 
End 07/2025
 
Description High-throughput drug screening for identification of novel therapeutic targets for lung regeneration
Amount £12,600 (GBP)
Funding ID PhD2022 100046 
Organisation Rosetrees Trust 
Sector Charity/Non Profit
Country United Kingdom
Start 09/2022 
End 04/2023
 
Description Study of human late fetal lung tissue and 3D in vitro organoids to replace and reduce animals in lung developmental research
Amount £120,000 (GBP)
Funding ID NC/X001644/1 
Organisation National Centre for the Replacement, Refinement and Reduction of Animals in Research (NC3Rs) 
Sector Public
Country United Kingdom
Start 01/2023 
End 12/2026
 
Title Human Fetal lung immune atlas 
Description Data based on https://www.science.org/doi/10.1126/sciimmunol.adf9988 
Type Of Material Database/Collection of data 
Year Produced 2023 
Provided To Others? Yes  
Impact Browsable atlas 
URL https://www.lungcellatlas.org
 
Description "Lung development in health and disease" (invited seminar by Cambridge University Respiratory Research Seminars) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Professional Practitioners
Results and Impact Invited seminar
Year(s) Of Engagement Activity 2022
 
Description "Lung development in health and disease" (invited seminar speaker at Edinburgh University) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Professional Practitioners
Results and Impact invited seminar - Centre for Regenerative Medicine, Edinburgh University
Year(s) Of Engagement Activity 2022
 
Description BBC Radio interview (World Service) on Nature publication 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact BBC Radio interview (World Service, The NEWSROOM) on 19th June 2024, invited on day Nature publication as corresponding author - https://doi.org/10.1038/s41586-024-07575-x
Year(s) Of Engagement Activity 2024
 
Description Interview with the Guardian newspaper, 19th June 2024 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
Results and Impact Interview as corresponding author for Nature publication https://doi.org/10.1038/s41586-024-07575-x
Year(s) Of Engagement Activity 2024
URL https://www.theguardian.com/world/article/2024/jun/19/covid-immune-response-study-could-explain-why-...
 
Description Invited author for The Conversation, "Why did some people get COVID but other didn't?" 28th June 2024 
Form Of Engagement Activity A magazine, newsletter or online publication
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
Results and Impact Invited author for The Conversation, "Why did some people get COVID but other didn't?" 28th June 2024
Year(s) Of Engagement Activity 2024
URL https://theconversation.com/we-finally-know-why-some-people-got-covid-while-others-didnt-233063
 
Description Invited speaker at British Thoracic Society Winter Meeting: "Can we fix it? Possibilities for lung regeneration" 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact International Respiratory conference talk - invited speaker
Year(s) Of Engagement Activity 2022
 
Description Invited speaker at Single Cell in Clinical Translation Symposium at Great Ormond Street Institute of Child Health 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Invited talk
Year(s) Of Engagement Activity 2023
 
Description Invited speaker at UK Regenerative Medicine Conference 2023 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact As above
Year(s) Of Engagement Activity 2023
URL https://www.ukrmp.org.uk/2023/09/ukrmp-regenerative-medicine-2023-registration/
 
Description Invited to give award lecture at the British Thoracic Society Winter Meeting 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact International Respiratory conference in London, award lecture for significant contribution to Respiratory Medicine
Year(s) Of Engagement Activity 2023
URL https://www.brit-thoracic.org.uk/news/2023/bts-celebrates-the-winners-of-the-bts-balr-a-luk-lecture-...
 
Description Nature webinar with panel discussion "Local and systemic responses to SARS-CoV-2 infection in children and adults" 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact webinar organised by Nature, sponsored by 10x, presentation with panel discussion
Year(s) Of Engagement Activity 2022
 
Description Press release on Science Immunology paper being published 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
Results and Impact Press release: https://www.ucl.ac.uk/news/2023/dec/immune-cells-could-offer-new-avenues-treating-respiratory-diseases
Year(s) Of Engagement Activity 2023
URL https://www.ucl.ac.uk/news/2023/dec/immune-cells-could-offer-new-avenues-treating-respiratory-diseas...
 
Description TV interview (live) at Newzroom Afrika (South Africa), 2nd July 2024 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
Results and Impact Invited live TV interview
Year(s) Of Engagement Activity 2024
URL https://www.youtube.com/watch?v=sMoTomyWYL8
 
Description UCL Grand Round: "Mechanisms of why children are generally protected from severe COVID-19" 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Professional Practitioners
Results and Impact invited Grand Round talk
Year(s) Of Engagement Activity 2022