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NSFGEO-NERC: Mechanisms of Adaptation to Terrestrial Antarctica through Comparative Physiology and Genomics of Antarctic and sub-Antarctic Insects

Lead Research Organisation: University of Birmingham
Department Name: Sch of Biosciences

Abstract

Insects are the most abundant and diverse terrestrial animals on the planet, yet few are capable of surviving in Antarctica's inhospitable climate. Genetic evidence indicates that Antarctic insects, as well as other terrestrial arthropods, have persisted throughout the repeated glaciation events of the Pleistocene and earlier. Thus, these species are ideal test cases for modeling the biogeography of terrestrial Antarctica and evolutionary responses to changing environments. The midge Belgica antarctica is perhaps the best studied Antarctic terrestrial arthropod in terms of physiology and genetics. This species is the southernmost free-living insect, and we recently participated in sequencing the genome and transcriptome of this species. However, a lack of information from closely related species has hindered our ability to pinpoint the precise evolutionary mechanisms that permit survival in Antarctica. In this proposal, we establish an international collaboration with scientists from the US, UK, France, and Chile to expand physiological and genomic research of Antarctic and sub-Antarctic midges. In addition to B. antarctica, our project focuses on Eretmoptera murphyi, a sub-Antarctic endemic that has invaded the maritime Antarctic, Halirytus magellanicus, a strictly Magellanic sub-Antarctic species endemic to Tierra del Fuego, and B. albipes, a sub-Antarctic species found on Crozet Island in the Indian Ocean. These four species are closely related and span an environmental gradient from sub-Antarctic to Antarctic habitats.

Our central hypothesis is that shared mechanisms drive both population-level adaptation to local environmental conditions and macroevolutionary changes that permit a select few insects to tolerate Antarctic climates. Our Specific Aims are 1) Characterize conserved and species-specific adaptations to extreme environments through comparative physiology and transcriptomics, 2) Comparative genomics of Antarctic and sub-Antarctic midges to identify macroevolutionary signatures of Antarctic adaptation, and 3) Investigate patterns of diversification and location adaptation using population genomics. Our Broader Impacts include deploying an education professional with our research team to coordinate outreach and continuing our partnership with a Kentucky non-profit focused on K-12 STEM programming.

Planned Impact

Our project will benefit STEM education through K-12 outreach and significant training and outreach opportunities for graduate students and postdocs in both US and UK. Continuing the tradition of past projects, we will deploy an education professional on each field team to participate in field work and coordinate K-12 outreach efforts. We will also develop our existing partnership with the Living Arts and Science Center, a Kentucky nonprofit that provides STEM programming for students. Specifically, our research team will design and implement a lesson on Antarctic biology for Science Explorers, an afterschool science program for underprivileged students in Lexington, KY. Our UK project partners also have strong records of public engagement - Hayward has already run collaborative teaching projects with the UoB School, and is involved in the NERC funded ENCOMPASS Project. Convey serves as the UK STEM Ambassador for the Association of Polar Early Career Scientists. Our Chilean Partner in collaboration with Convey has already received Newton-Picarte funding in support of regional outreach and education activities in Tierra del Fuego, reaching local educational, industrial, military and governance sectors of local communities

Other non-academic users linked to this proposal will be POLICY MAKERS and their science advisors. In the UK our major stakeholder is the Foreign and Commonwealth Office (FCO), with whom BAS have active dialogue, and who are very interested in and encouraging the application of research related to biodiversity and regional biogeography in the context of conservation and biosecurity.

Through the Scientific Committee on Antarctic Research (SCAR) and the Antarctic Treaty System, and the Intergovernmental Panel on Biodiversity and Ecosystem Services, the proposal will generate key baseline evidence refining biogeographical understanding of the region, and therefore the quality of advice that can be given to GOVERNANCE ORGANISATIONS. Further, through the UK's leading participation in the Antarctic Treaty Consultative Meeting (ATCM, Antarctica's governing body), considerable effort is currently being dedicated to the design of robust and objective area protection systems, and of an 'Antarctic CONSERVATION Strategy'. All partners are closely involved in all these activities, and Convey is Deputy Co-Chair of the SCAR 'State of the Antarctic Ecosystem' programme.

A related user group are the ECOTOURISM industry, in particular the International Association of Antarctic Tour Operators (IAATO), who rely strongly on maintenance of the unique biodiversity of the southern and Antarctic regions, as well as promoting regional science in their education and outreach activities, and encouraging client involvement in 'citizen science'.
Our outputs on understanding stress mechanisms (such as those underpinning freeze tolerance), have direct applications in both INDUSTRY and MEDICAL RESEARCH. For example, the ability to cryopreserve 'live' insects or their cells (e.g. sperm) has huge value for commercial insect producers, as well as broader applications with other biological material (including organ transplants).

All partners are actively engaged in PUBLIC OUTREACH activities through their respective Press Offices, regularly interacting with various media outlets, NGOs, public societies, etc. .

The use of 'open access' routes for publication, along with public access databases, our own institution and project websites, as well as other mechanisms of publicising our research (e.g. social media, blogs, general interest articles etc.) will ensure our outputs are highly and rapidly visible to all relevant stakeholder communities.

Publications

10 25 50
 
Description Work is still ongoing so key findings will continue to emerge.

Work as part of a PhD project that partly run in parallel with the NSF-NERC Geo project has undertaken biochemical analysis of Antarctic soils and investigated gas emissions under different climate scenarios. We have quantified the impacts of non-native species in altering soil biochemistry (increasing nitrogen and ammonia) and release of green house gases such as methane. This work is in preparation for publication.

During 2024 we established a new collaboration with Prof Yin Chen (Birmingham). We were also able to hire a research assistant for a period of 6 weeks. This allowed us to move forward with comparative microbiome studies of Antarctic insect species. Key outcomes from this work are in review with further manuscripts in preparation. The microbiomes of all insect species we are studying have never been published before, so this is entirely novel data. We have been able to discount the role of certain microbes (Wolbachia) in being responsible for asexual reproduction in some Antarctic species. We have identified other micro-organisms which help explain the role certain Antarctic insect species (including some invasive species) are playing in changing nutrient cycling (availability of nitrogen and ammonia in particular) in Antarctic soils. The work will set out the implications of this in the context of risk of establishment of other non-native species (especially plants) given that low nutrient content of soils has been a primary barrier to their establishment until now. In combination with climate warming, this could accelerate Antarctic terrestrial ecosystem changes.

During 2024, we also established a collaboration with the University of Magallanes (Dr Tamar Contador). Field work in Chile has identified new insect species not previously studied. This allows us to conduct comparative physiology, genomics and microbiome analyses.
Exploitation Route Antarctic insect microbiomes provide entirely novel data and are likey to identify many species not studied to date. Our work will help understanding of how microorgansism may contribute to asexual reprocuction strategies (as we are comparing sexual and asexual species. We can discount Wolbachia (the most common bacteria associated with parthenogenesis) as the reason for this strategy as Wolbachia is not present in the species we have studied. We have also identified species that help explain how some Antarctic species are significantly increasing nutrient levels in Antarctic soils. The fact that these organisms are adapted to perform these functions at low temperatures has numerous potential applications.
Comparative physiology and gene expression studies will advance our understanding of how organisms cope with environmental stress and climate change. This has broader applications in how to enhance the performance and potential commercial production of beneficial insect species as well as control methods for insect pests. This work also advances our understanding of evolutionary biology given the unique situation that Antarctic insects have been evolving in isolation for millions of years and largely unexposed to human environmental impacts.

Our work on understanding the risks of non native species in Antarctica has relevance to policy, tourism and research organisation operations in the region.
Sectors Agriculture

Food and Drink

Education

Environment

Leisure Activities

including Sports

Recreation and Tourism

 
Title Data from: Simulated winter warming negatively impacts survival of Antarctica's only endemic insect 
Description Antarctic winters are challenging for terrestrial invertebrates, and species that live there have specialized adaptations to conserve energy and protect against cold injury in the winter. However, rapidly occurring climate change in these regions will increase the unpredictability of winter conditions, and there is currently a dearth of knowledge on how the highly adapted invertebrates of Antarctica will respond to changes in winter temperatures. We evaluated the response of larvae of the Antarctic midge, Belgica antarctica, to simulated winters at three ecologically relevant mean temperature scenarios: Warm (-1 °C), Normal (-3 °C) and Cold (-5 °C). Within each scenario, larvae were placed into three distinct habitat types in which they are commonly observed (decaying organic matter, living moss, and Prasiola crispa algae). Following the simulated overwintering period, a range of physiological outcomes were measured, namely survival, locomotor activity, tissue damage, energy store levels and molecular stress responses. Survival, energy stores and locomotor activity were significantly lower following the Warm overwintering environment than at lower temperatures, but tissue damage and heat shock protein expression (a proxy for protein damage) did not significantly differ between the three temperatures. Survival was also significantly lower in larvae overwintered in Prasiola crispa algae, although the underlying mechanism is unclear. Heat shock proteins were expressed least in larvae overwintering in living moss, suggesting it is less stressful to overwinter in this substrate, perhaps due to a more defined structure affording less direct contact with ice. Our results demonstrate that a realistic 2 °C increase in winter microhabitat temperature reduces survival and causes energy deficits that have implications for subsequent development and reproduction. While our Warm winter scenario was close to the range of observed overwintering temperatures for this species, warmer winters are expected to become more common in response to climate change. Conversely, if climate change reduces the length of winter, some of the negative consequences of winter warming may be attenuated, so it will be important to consider this factor in future studies. Nonetheless, our results indicate that winter warming could negatively impact cold-adapted insects like the Antarctic midge. 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
URL http://datadryad.org/stash/dataset/doi:10.5061/dryad.d7wm37q3k
 
Description Antarctic Insect Diapause 
Organisation Osaka University
Country Japan 
Sector Academic/University 
PI Contribution We have collected Antarctic samples for the study and collaborated on a manuscript investigating diapause (dormancy) in the Antarctic insect Belgica antarctica
Collaborator Contribution The team at Osaka undertook the lab work and initial writing of the paper
Impact Published paper: Obligate diapause and its termination shape the life-cycle seasonality of an Antarctic insect Mizuki Yoshida, Peter Convey, Scott A. L. Hayward, Richard E. Lee Jr., David L. Denlinger, Nicholas M. Teets & Shin G. Goto Scientific Reports volume 15, Article number: 3890 (2025)
Start Year 2024
 
Description Antarctic insect microbiomes 
Organisation University of Birmingham
Country United Kingdom 
Sector Academic/University 
PI Contribution We have collected Antarctic insect samples from range of midge species. PhD student (Octavia Brayley) has extracted microbiome DNA sent for sequencing (Novogene) and analysed outputs. We are undertaking comparative analysis across species, also investigating developmental changes in microbiome within species
Collaborator Contribution Project partner Yin Chen (University of Birmingham). His lab have trained PhD student in DNA extraction and bioinformatic techniques and assisted in microbiome analysis
Impact Manuscript in review (Antarctic Science) Absence of Wolbachia in the sub-Antarctic midge, Eretmoptera murphyi (Diptera: Chironomidae) Authors Octavia D. M. Brayley1,2 (oxb233@student.bham.ac.uk; https://orcid.org/0000-0003-1826-543X), Scott A.L. Hayward1,3 (https://orcid.org/0000-0002-1899-6630), Kirsty McCready1 (https://orcid.org/0000-0002-1175-5973), Shengwei Liu4 (https://orcid.org/0000-0001-6418-2884), Yin Chen1 (https://orcid.org/0000-0002-0367-4276), Sami Ullah3,5 (https://orcid.org/0000-0002-9153-8847), Nicholas Teets7 (https://orcid.org/0000-0003-0963-7457), Peter Convey1,2,6,8 (https://orcid.org/0000-0001-8497-9903) At least one other manuscript in prep.
Start Year 2024
 
Description Comparative studies of Chilean insects 
Organisation University of Magallanes
Country Chile 
Sector Academic/University 
PI Contribution PhD student Octavia Brayley and co-I Pete Convey have visited Chile for 6 week field season so undertake comparative ecophysiology experiments and collect samples for comparative genomics, microbiome analysis and taxonomy.
Collaborator Contribution Dr Tamara Contador has hosted the visit. In kind contribution - use of lab space, equipment and transport to field sites. Staff time. Free accommodation for PhD student during the trip.
Impact At least one paper will emerge from the field season.
Start Year 2024
 
Description Long read Genome sequencing collaboration 
Organisation Brigham Young University
Country United States 
Sector Academic/University 
PI Contribution We have established a new collaboration with Dr Paul Frandsen (Bingham Young University, Utah) in order to undertake long read genome sequencing of our 2 key Antarctic insect species. We provided samples for sequencing and Postdoc for training.
Collaborator Contribution Hosting/Training Posdoc - Dr Monica Aquilino in PacBio technology long read sequencing and bioinformatics. Trouble-shooting sample prep.
Impact We are still undertaking genome sequence analyses
Start Year 2022
 
Description Neuroanatomy of Eretmoptera murphyi 
Organisation King's College London
Country United Kingdom 
Sector Academic/University 
PI Contribution We collaborated with Dr Darren Williams (KCL) who is investigating differences in insect neuroanatomy as part of a Leverhulme grant. We host Darren and his postdoc (Connor Sproston) at Birmingham and provided several larvae so they could conduct some immunohistochemistry and investigate neuroanatomical and cell death markers.
Collaborator Contribution Dr Darren Williams (KCL) who is investigating differences in insect neuroanatomy as part of a Leverhulme grant. E. murphyi has been evolving in isolation for >30 million years so may well have quite unique neuroanatomy. An outputs from this work will help us better understand Antarctic insect evolution and development. It may also help us interpret genome sequence data.
Impact Manuscripts will be most likely outcome in due course. Additional samples may be required first (returning to the UK summer 2024).
Start Year 2023
 
Description Project partner: ASICS Biodiversa project - Subantarctic (CROZET + KERGUELEN) 
Organisation University of Rennes 1
Country France 
Sector Academic/University 
PI Contribution BiodivERsA is a network of national and regional funding organisations promoting pan-European research on biodiversity and ecosystem services, and offering innovative opportunities for the conservation and sustainable management of biodiversity. We have become partners in the ASICS Biodiversa project ( https://www.coldregioninvasives.com/partners) led by Prof David Renault (Rennes University). Several of the species we are studying with our NSF-NERC grant are potential Antarctic invasive species under climate change, we will contribute microclimate, sequencing and physiology data to help develop a more integrated view of the probability of non-native species becoming established in Antarctica and their ecological impact.
Collaborator Contribution This is a very large international network investigating invasive species in polar and alpine regions. We share microclimate, sequencing and physiology data to help develop a more integrated view of the probability of non-native species becoming established and their ecological impact.
Impact None as yet
Start Year 2020
 
Description Chelsea Flower Show (Royal Entomological Society Stand) 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Undertaken by PhD student Octavia Brayley:
This activity involved talking to the public to engage them with insect science, explain the importance of insects and biodiversity in the UK, the structure and design of the garden and the history behind it, and to encourage them to get involved in RES activities. I also explained my own entomology research as a PhD student
Year(s) Of Engagement Activity 2023
URL https://www.royensoc.co.uk/chelsea/
 
Description Polar Diaries podcast 
Form Of Engagement Activity Engagement focused website, blog or social media channel
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Podcasts interviewing polar researchers.
Highly commended for the "Alice Robert's Award for Public Engagement"
Year(s) Of Engagement Activity 2024
 
Description Women in Science Day 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact PhD student linked to the project gave presentation at University Think Tank Museum about research and career path so far.
Year(s) Of Engagement Activity 2024