Beyond photosynthesis: overturning source-centric plant growth paradigms
Lead Research Organisation:
University of Cambridge
Department Name: Geography
Abstract
Wood is a remarkable material with unique properties, and accounts for c.60% of all living biomass. It is responsible for sequestering c.18% of fossil fuel carbon emissions annually, reducing the growth rate of atmospheric CO2 and hence mitigating climate change. While there have been many investigations into the factors controlling wood formation, which have quantified patterns and relationships, our knowledge of the underlying physiological processes is very poor. This greatly limits our understanding of the global carbon cycle, climatic and atmospheric CO2 controls on wood anatomy, and the interpretation of past environments using tree rings.
Wood formation occurs through the production of new cells just under the bark, which then undergo enlargement and wall thickening, before dying and becoming functioning xylem, the main tissue responsible for water transport and structural support. This project aims to uncover the controls, currently largely unknown, on wood formation, and hence final wood anatomy and carbon content. We will do this by measuring the effects of experimental manipulations on a wide range of anatomical, biochemical, and genomic characteristics in a clonal tree model, hybrid poplar, and use this knowledge to produce a major advance in our understanding of terrestrial carbon cycling through the development of mechanistic models of wood formation and whole-tree growth.
Dynamic Global Vegetation Models (DGVMs) are our main tools for studying global terrestrial carbon dynamics, but do not explicitly consider growth. DGVMs are instead constructed around the paradigm that plant growth is equivalent to the balance of photosynthesis and respiration, whereas there is considerable evidence that growth is controlled independently of the overall carbon balance. If true, this would largely invalidate the basic premise of these models. The limitations of the current approach are evident in the finding that while DGVMs, on average, reproduce the magnitude of the historical terrestrial carbon sink, they have very different underlying climate and CO2 sensitivities and therefore cannot be considered to provide a mechanistic explanation of the processes behind this imbalance. A growth-led DGVM has the potential to resolve this problem and thereby greatly improve our ability to predict the behaviour of the future global carbon cycle. This has so far not been possible due to the lack of fundamental physiological knowledge. Our experimental manipulations on hybrid poplar will produce the knowledge necessary for the incorporation of explicit growth into DGVMs, overturning their most fundamental paradigm, and so enable a major breakthrough in understanding and predictability.
Our highly innovative collaboration brings together a research group working at the cutting edge of the molecular physiology of wood formation, with one highly experienced in the development of plant growth models and DGVMs. This unique collaboration has the potential to produce a major advance in our understanding of wood formation directly targeted at the needs of terrestrial carbon cycling models.
The abiotic factors to be considered are temperature, atmospheric CO2, daylength, and soil moisture. We will investigate how carbohydrate supply interacts with temperature in controlling cell numbers, sizes, and wall thicknesses. In another series of experiments, we will produce growth rings under an accelerated annual growth cycle using changing daylength and temperature, and analyse how the influences of these factors on ring anatomy are achieved through changes in the rates and durations of differentiation phases. Soil moisture manipulations will be used to quantify the influence of drought on wood anatomy through effects on cell enlargement, proliferation, and carbohydrate supply, and hybrid poplar will be grown under field conditions for the entire length of the project to provide a strong test of our new understanding of tree growth.
Wood formation occurs through the production of new cells just under the bark, which then undergo enlargement and wall thickening, before dying and becoming functioning xylem, the main tissue responsible for water transport and structural support. This project aims to uncover the controls, currently largely unknown, on wood formation, and hence final wood anatomy and carbon content. We will do this by measuring the effects of experimental manipulations on a wide range of anatomical, biochemical, and genomic characteristics in a clonal tree model, hybrid poplar, and use this knowledge to produce a major advance in our understanding of terrestrial carbon cycling through the development of mechanistic models of wood formation and whole-tree growth.
Dynamic Global Vegetation Models (DGVMs) are our main tools for studying global terrestrial carbon dynamics, but do not explicitly consider growth. DGVMs are instead constructed around the paradigm that plant growth is equivalent to the balance of photosynthesis and respiration, whereas there is considerable evidence that growth is controlled independently of the overall carbon balance. If true, this would largely invalidate the basic premise of these models. The limitations of the current approach are evident in the finding that while DGVMs, on average, reproduce the magnitude of the historical terrestrial carbon sink, they have very different underlying climate and CO2 sensitivities and therefore cannot be considered to provide a mechanistic explanation of the processes behind this imbalance. A growth-led DGVM has the potential to resolve this problem and thereby greatly improve our ability to predict the behaviour of the future global carbon cycle. This has so far not been possible due to the lack of fundamental physiological knowledge. Our experimental manipulations on hybrid poplar will produce the knowledge necessary for the incorporation of explicit growth into DGVMs, overturning their most fundamental paradigm, and so enable a major breakthrough in understanding and predictability.
Our highly innovative collaboration brings together a research group working at the cutting edge of the molecular physiology of wood formation, with one highly experienced in the development of plant growth models and DGVMs. This unique collaboration has the potential to produce a major advance in our understanding of wood formation directly targeted at the needs of terrestrial carbon cycling models.
The abiotic factors to be considered are temperature, atmospheric CO2, daylength, and soil moisture. We will investigate how carbohydrate supply interacts with temperature in controlling cell numbers, sizes, and wall thicknesses. In another series of experiments, we will produce growth rings under an accelerated annual growth cycle using changing daylength and temperature, and analyse how the influences of these factors on ring anatomy are achieved through changes in the rates and durations of differentiation phases. Soil moisture manipulations will be used to quantify the influence of drought on wood anatomy through effects on cell enlargement, proliferation, and carbohydrate supply, and hybrid poplar will be grown under field conditions for the entire length of the project to provide a strong test of our new understanding of tree growth.
Organisations
Publications
Friend AD
(2022)
Wood structure explained by complex spatial source-sink interactions.
in Nature communications
Greaves C
(2025)
Confocal fluorescence microscopy reveals subtle lignification variations in a Scots pine blue ring
in Dendrochronologia
Helariutta Y
(2023)
Epigenetics rules cambial growth
in Nature Plants
| Title | Supplementary Materials to the publication Wood structure explained by complex spatial source-sink interactions |
| Description | Model output and visualisation scripts to the publication Wood structure explained by complex spatial source-sink interactions. A readme explains the file origin. model output files and their variables and units are described within the .R analysis code. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2022 |
| Provided To Others? | Yes |
| URL | https://zenodo.org/record/7441946 |
| Title | Supplementary Materials to the publication Wood structure explained by complex spatial source-sink interactions |
| Description | Model output and visualisation scripts to the publication Wood structure explained by complex spatial source-sink interactions. A readme explains the file origin. model output files and their variables and units are described within the .R analysis code. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2022 |
| Provided To Others? | Yes |
| URL | https://zenodo.org/record/7362517 |
| Title | Supplementary Materials to the publication Wood structure explained by complex spatial source-sink interactions |
| Description | Model output and visualisation scripts to the publication Wood structure explained by complex spatial source-sink interactions. A readme explains the file origin. model output files and their variables and units are described within the .R analysis code. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2022 |
| Provided To Others? | Yes |
| URL | https://zenodo.org/record/7362516 |
| Description | Lab visit and engagement activity in the frame of Cambridge's STEM SMART programme 1 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | Students came to The Sainsbury Laboratory on 17 of August 2023 to take part in an role play activity framed around feeding the world in the future and had a lab tour and talk to showcase the research in the facilities, especially the research on tree growth in changing climate. The activity was led a postdoctoral associate in my group and supported by Selwyn and Trinity College, Cambridge, facilitators from Selwyn College, and the Sainsbury Laboratory Events team. STEM SMART (Subject Mastery and Attainment Raising Tuition) is a widening participation initiative from the University of Cambridge in association with Isaac Physics, to provide free, complementary teaching and support to UK (non-fee paying) students who: have either experienced educational disadvantage or belong to a group that is statistically less likely to progress to higher education and are considering applying to Engineering, Computer Science, Physical Sciences (e.g. physics, chemistry, earth sciences, materials science) or Biological Sciences (eg plant sciences, pharmacology, physiology, evolution and behaviour, biochemistry) courses at university and are studying A Levels (or equivalent) in maths and science. The activity reached 26 STEM SMART students and 6 facilitators which were Cambridge students. The activity included a role play "Feeding the world" with students assigned to different roles (farmer, public, politician, researcher, agrobusiness, NGO, journalist) with different material to go through, that had to communicate and negotiate to get information from each other and had different stakeholders to report to. The talk and the lab tour covered research at the Sainsbury Laboratory in general with a focus on the research on tree growth in a changing climate. |
| Year(s) Of Engagement Activity | 2023 |
| Description | Lab visit in the frame of Cambridge's STEM SMART program 2 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | Students came to The Sainsbury Laboratory on 22 of August 2023 for a lab tour and talk to showcase the research in the facilities, especially the research on tree growth in changing climate. The activity was led my postdoctoral associate in my group and supported by Selwyn and Trinity College, and the Sainsbury Laboratory Events team. STEM SMART (Subject Mastery and Attainment Raising Tuition) is a widening participation initiative from the University of Cambridge in association with Isaac Physics, to provide free, complementary teaching and support to UK (non-fee paying) students who: have either experienced educational disadvantage or belong to a group that is statistically less likely to progress to higher education and are considering applying to Engineering, Computer Science, Physical Sciences (e.g. physics, chemistry, earth sciences, materials science) or Biological Sciences (eg plant sciences, pharmacology, physiology, evolution and behaviour, biochemistry) courses at University and are studying A Levels (or equivalent) in maths and science. The activity reached 9 STEM SMART students. The talk and the lab tour covered research at the Sainsbury Laboratory in general with a focus on the research on tree growth in a changing climate. |
| Year(s) Of Engagement Activity | 2023 |
| Description | On-site oral presentation at EGU 2023 General Assembly, Vienna: "Latewood density and overall ring anatomy responses to temperature in Scots pine explained by carbohydrate diffusion and cellular kinetics" |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Presentation of research results. Outcome was lots of discussion and invitations for further collaborations. |
| Year(s) Of Engagement Activity | 2023 |
| URL | https://meetingorganizer.copernicus.org/EGU23/session/45506#Orals |
| Description | Public engagement talk: "Festival of Plants", Cambridge |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | The activity was a 15 minute chalk talk with some props in a science marquee during the Festival of Plants on June 10th 2023 in the Botanic Garden Cambridge by Eva Hellmann, a postdoctoral associate in my group. The title of the interactive talk was "The Tree and Me - what have trees ever done for us?" and the content was the global carbon cycle, carbon prediction and how trees affect the climate and their contribution is incorporated into the climate prediction models. The festival of plants in the Cambridge Botanic Garden draws in up to 3000 visitors each year and aims to help engaging the general public with science around plants every year. The group of visitors is rather diverse ranging from young children to elderly and from local population to visitors that have travelled further and reaches across various education levels. The science marquee enables the public to listen and interact with scientist in short talks that are more or less interactive. Our talk about trees and their role in carbon capture and the future climate reached about 20 people, was highly interactive and included questions to the audience, asking them to interpret scientific results and was followed by many questions from the audience. |
| Year(s) Of Engagement Activity | 2023 |
| Description | STEM smart student talk and workshop |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | On 20th of August a group of 16 STEM smart students visited the Sainsbury Laboratory. Eva Hellmann gave a talk and tour about her research and the wider field. The students had the chance to see a laboratory, plant growth chambers, microscopy facilities and where taken through the process of an experiment. They had the chance to engage and ask questions. |
| Year(s) Of Engagement Activity | 2024 |
| Description | Talk at the Festival of plants 2024 "The becoming of a tree ring" |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Eva Hellmann gave a 20min talk to the general public with the title "The becoming of a tree ring" talking about tree growth and the environmental factors shaping it. This happened in the frame of the "Festival of plants" at the Botanic Garden in Cambridge. |
| Year(s) Of Engagement Activity | 2024 |
