Heterologous production and characterisation of lichen-derived secondary metabolites.

Lead Research Organisation: University of Nottingham
Department Name: School of Life Sciences

Abstract

Lichen-forming fungi produce a diverse range of unique secondary metabolites possessing a variety of biological activities. Therefore, these natural products have potential for biotechnological and industrial applications. However, the extremely slow growth rates associated with lichens hampers their biotechnological exploitation. Two strategies will be applied to overcome this problem. The first approach will focus on the investigation of the growth rate of lichens. This will involve UV mutagenesis of lichen material in order to create faster-growing mutants. Once such mutants have been generated they will be analysed at the genomic level to obtain insights on the underlying mechanism of growth restriction of the mycobiont. The second approach focuses on the heterologous production and characterisation of secondary metabolites of lichen-derived metabolites. By using bioinformatics and synthetic biology approaches, genes from lichen secondary metabolite biosynthesis gene clusters will be identified and assembled in expression plasmids. These plasmids will be used for transformation of fungal heterologous expression platform strains. Subsequently, metabolite production will be induced and compounds will be tested for their biological activities.

Publications

10 25 50
 
Title Cloning of lichen-derived secondary metabolite biosynthesis genes 
Description Isolation of genomic DNA from lichen species collected from the environment. Successful amplification of polyketide synthase genes and cloning into heterologous expression plasmids. Transformation of Aspergillus species expression platform strains. 
Type Of Material Biological samples 
Year Produced 2019 
Provided To Others? No  
Impact Lichens are extremely rich in a wide range of different natural products. However, attempts by others currently failed to produce any of these metabolites in a heterologous host. This study successfully amplified respective genes from lichens and generated heterologous expression platforms. The analysis for the production of secondary metabolites is currently pending. 
 
Title Heat sensitivity of ascospores from lichen mycobionts 
Description Various lichens have been collected from the environment and sexual spores released under laboratory conditions. Spores are investigated for germination under dry and wet heat stress conditions. 
Type Of Material Biological samples 
Year Produced 2019 
Provided To Others? No  
Impact Lichen species are generally very slow growing and have adapted to harsh enviironmental conditions including heat and cold stress. Mycobionts (the fungal partners in this symbiosis) produce sexual spores from which new mycobionts can be produced. It is currently unknown, which stress conditions can be tollerated by these spores and whether a heat activation or inactivation occurs on these spores. Given a global change in climate, these analyses can help to understand the distribution of individual lichen species in a changing environment.