University of Edinburgh - Equipment Account
Lead Research Organisation:
University of Edinburgh
Department Name: UNLISTED
Abstract
Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.
Organisations
Publications
Stoltzfus L
(2019)
Tiling Optimizations for Stencil Computations Using Rewrite Rules in L ift
in ACM Transactions on Architecture and Code Optimization
Gong J
(2019)
Polymer Microarrays for the Discovery and Optimization of Robust Optical-Fiber-Based pH Sensors.
in ACS combinatorial science
Kapara A
(2021)
Detection of Estrogen Receptor Alpha and Assessment of Fulvestrant Activity in MCF-7 Tumor Spheroids Using Microfluidics and SERS.
in Analytical chemistry
Barth N
(2021)
A Bivalent Activatable Fluorescent Probe for Screening and Intravital Imaging of Chemotherapy-Induced Cancer Cell Death
in Angewandte Chemie International Edition
Pablo Roldán-Varona
(2023)
Selective plane illumination optical endomicroscopy with polymer imaging fibers
in APL Photonics
Brock Andrew
(2016)
Generative and Discriminative Voxel Modeling with Convolutional Neural Networks
in arXiv e-prints
Edwards Harrison
(2015)
Censoring Representations with an Adversary
in arXiv e-prints
Geras Krzysztof J.
(2014)
Scheduled denoising autoencoders
in arXiv e-prints
Long J
(2020)
Frugal filtering optical lenses for point-of-care diagnostics.
in Biomedical optics express
Choudhury D
(2017)
Endoscopic sensing of alveolar pH.
in Biomedical optics express
Brown C
(2021)
scRNA Transcription Profile of Adult Zebrafish Podocytes Using a Novel Reporter Strain.
in Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology
Subiros-Funosas R
(2019)
Fluorogenic Trp(redBODIPY) cyclopeptide targeting keratin 1 for imaging of aggressive carcinomas.
in Chemical science
Mellanby R
(2018)
Tricarbocyanine N -triazoles: the scaffold-of-choice for long-term near-infrared imaging of immune cells in vivo
in Chemical Science
Kapara A
(2020)
Investigation of cellular uptake mechanism of functionalised gold nanoparticles into breast cancer using SERS.
in Chemical science
Ghashghaei O
(2018)
Multiple Multicomponent Reactions: Unexplored Substrates, Selective Processes, and Versatile Chemotypes in Biomedicine
in Chemistry - A European Journal
Byerly Flint H
(2022)
You vs. us: framing adaptation behavior in terms of private or social benefits.
in Climatic change
Chitalu F
(2020)
Displacement-Correlated XFEM for Simulating Brittle Fracture
in Computer Graphics Forum
Chitalu F
(2020)
Binary Ostensibly-Implicit Trees for Fast Collision Detection
in Computer Graphics Forum
Fowler S
(2016)
An Erlang Implementation of Multiparty Session Actors
in Electronic Proceedings in Theoretical Computer Science
De Moliner F
(2018)
Quinone-Derived p-Extended Phenazines as New Fluorogenic Probes for Live-Cell Imaging of Lipid Droplets.
in Frontiers in chemistry
Singh R
(2018)
Techniques for Interference Mitigation Using Cooperative Resource Partitioning in Multitier LTE HetNets
in IEEE Systems Journal
Kristien M
(2020)
Fast and Correct Load-Link/Store-Conditional Instruction Handling in DBT Systems
in IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems
Feltrin L
(2019)
Narrowband IoT: A Survey on Downlink and Uplink Perspectives
in IEEE Wireless Communications
Yerolatsitis S
(2019)
Ultra-low background Raman sensing using a negative-curvature fibre and no distal optics.
in Journal of biophotonics
Kölln LS
(2022)
Label2label: training a neural network to selectively restore cellular structures in fluorescence microscopy.
in Journal of cell science
Kufcsák A
(2017)
Time-resolved spectroscopy at 19,000 lines per second using a CMOS SPAD line array enables advanced biophotonics applications.
in Optics express
Ehrlich K
(2017)
pH sensing through a single optical fibre using SERS and CMOS SPAD line arrays.
in Optics express
Kamaljith V
(2020)
Ultrafast-laser-ablation-assisted spatially selective attachment of fluorescent sensors onto optical fibers.
in Optics letters
Sultana N
(2019)
Failure recovery for bulk synchronous applications with MPI stages
in Parallel Computing
Fan W
(2020)
Capturing associations in graphs
in Proceedings of the VLDB Endowment
Fan W
(2019)
Dynamic scaling for parallel graph computations
in Proceedings of the VLDB Endowment
Choudhary TR
(2019)
High fidelity fibre-based physiological sensing deep in tissue.
in Scientific reports
Ehrlich K
(2020)
Time-Resolved Spectroscopy of Fluorescence Quenching in Optical Fibre-Based pH Sensors
in Sensors
Fleming H
(2018)
Dual purpose fibre - SERS pH sensing and bacterial analysis.
in The Analyst
Mohamad F
(2017)
Controlled core-to-core photo-polymerisation - fabrication of an optical fibre-based pH sensor.
in The Analyst
Katsarakis A
(2020)
Hermes: A Fast, Fault-Tolerant and Linearizable Replication Protocol
Yerolatsitis S
(2018)
Ultra-low Background Raman Sensing Using a Negative-curvature Fibre
Margaritov A
(2019)
Prefetched Address Translation
Collie B
(2020)
Modeling black-box components with probabilistic synthesis
Eduardo S
(2016)
Data Cleaning using Probabilistic Models of Integrity Constraints
Hagedorn B
(2018)
High performance stencil code generation with Lift
Description | Equipment account to support the EPSRC and MRC Centre for Doctoral Training in Optical Medical Imaging (OPTIMA): The equipment provided to support OPTIMA has been invaluable in fostering interdisciplinary collaborations and bringing physical sciences together with biomedical applications. The majority of the equipment bought with this grant has been sited at the Queen's Medical Research Institute and so has been invaluable in enabling precise fluorescence, Raman spectroscopy and other optical measurements to take place in the setting of biomedical research labs. This has facilitated interactions between the chemists, engineers and clinicians involved in OPTIMA research. The research domains of the CDTs in Pervasive Parallelism and Data Science are both inherently quite broad (eg hence the "Pervasive" in the title), and each published paper makes it contribution in a more constrained sub-area. It is noteworthy that many of these have been made in top-tier publication venues, including HPCA, NIPS, ASPLOS, CGO and EUROSYS, in some instances winning best paper awards. These results relied upon the existence of the equipment provided by this grant. |
Exploitation Route | The CDTs are very diverse - component research projects may be taken forward by future destinations of our graduates, and by further projects sparked by interactions at our academic and industrial events. |
Sectors | Digital/Communication/Information Technologies (including Software),Electronics,Energy |
URL | http://web.inf.ed.ac.uk/infweb/student-services/cdt/ds |
Description | As in previous years, research findings presented in the many papers listed have all been delivered at international venues. Additionally, they have formed the basis of student presentations at a string of CDT industrial engagement events. These have sparked interactions which have led to numerous internships in industry. Within Informatics, these internships are a primary means of dissemination of research results beyond academia, both during the internship and often subsequently in the permanent employment which flows from them. In the EPSRC and MRC CDT in Optical Medical Imaging, access to equipment has driven new collaborations between physical sciences and biomedical sciences (>40 new collaborations). |